Lates calcarifer (barramundi perch): 108879836
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Entry
108879836 CDS
T04895
Symbol
ssh1b
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108879836 (ssh1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108879836 (ssh1b)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108879836 (ssh1b)
3.1.3.48 protein-tyrosine-phosphatase
108879836 (ssh1b)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
108879836 (ssh1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
Tc-R-P
SPACA6_N
PTP-NADK
DUF7045
Motif
Other DBs
NCBI-GeneID:
108879836
NCBI-ProteinID:
XP_018526762
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All DBs
Position
LG9:complement(10365509..10382496)
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AA seq
893 aa
AA seq
DB search
MERTFWSSSKWTVSSRTTSRMHLVVKPSHKAMITVLPHFVEKAALTRREICRILSESFFM
VKGAALFLQQGGSAQGPKTPTHHKHAGDLPQHLQVMFKVLRSEDRIKLAVRLESGWSDRV
RYMVVIYTNGHQDTEENIVLGMDFTDKDSKNCSIGMVLPLWSDTNIHLDGDGGFSVNTAG
RSHVFKPVSVQAMWSALQVLHKACEVSRRFNYFPGGIALTWMAFYESCITSEQSCINEWN
AMTDLETTRSDSPTMFVDRPTERERTECLIKAKLRNIMMFQDLENITSKEIRNELEQHMS
CNLKEYKEFIDNEMLLILGQMDKATLIFDHVYLGSEWNASNLEELRDCGVGYILNVTREI
DNFFPGMFSYHNVRVYDEDATDLLAHWNDTYNFIVKAKKNNSKCLVHCKMGVSRSASTVI
AYAMKEYSWSLEKAYNFVKQKRSIAQPNAGFMRQLAEYEGILDASKQRHNKLWRPETDEE
GSDDLQASGHCAGGEETPVLREEEAWGGCGASPCRGMGLEMEPLDSLNYNYYFRRLSDSA
LDSEPSTPVRGPPLLGMERVFIEIEDVERDALLEDEGFPMAHLALPGEGTAAQTCGRLDP
LEDMRLRLEFSTLEEEDEEEAKKEEAEMAALAQTPGNSDGKRAGEEAERTEESRLGLANL
NTNNSNRLAAKRSCPAAFDDSASTGNPLKVKPSYQSCKDCLRLPQGRRCDRPAGGRSHRL
NPSRHCTVPSICIDPPGTNFASTPILQSLPAPAVIPPTLVQPCTHLYRCATCALGVPSFP
SANRQKLVSPMSCEDTPPDRSSVETEDMDEPQGGHVEVQISREGTGAIDVTTTEGLKLQP
GGAVELQQQALAQLQMPGLGIEFGLELMRQRAERLEKLPSLAMEGQLPVGPLP
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggactttttggagttcttcgaagtggactgtcagcagtagaacaaccagcagg
atgcacctggtcgtgaaaccttcacataaagccatgataaccgtgctgcctcactttgtg
gagaaagctgctctgactcggagggagatttgtcgcatcctcagtgagagcttcttcatg
gtcaaaggagccgccctcttcctccagcagggcggcagtgcacaaggaccaaagaccccg
acccaccacaaacatgcaggtgatttacctcaacacctccaggtcatgtttaaggtcctc
cggtctgaagatcgcattaaactggctgtacggttagagagcggatggtcggaccgagtg
cgctacatggtggttatctacaccaatggccatcaagacacagaagaaaacatcgtcctg
ggaatggacttcacagataaagacagtaaaaattgctctattgggatggtgctgccactg
tggagtgacaccaacatacatttagacggagatggaggcttcagcgtgaacacagcaggg
cggtcacatgtcttcaagcctgtttctgtccaggccatgtggtctgccctgcaagtcctc
cacaaagcatgcgaggtgtcacgtcggttcaactacttcccggggggtattgctctcacg
tggatggccttctatgagagctgcatcacctcagagcaaagctgcatcaatgagtggaac
gctatgaccgacctggagaccacccggtccgattcacccaccatgtttgtcgaccggcca
actgagcgagagagaacagaatgtctcattaaagctaagctacgcaacatcatgatgttt
caagacctggagaacatcacatcaaaggagattcgtaatgagctggagcagcatatgagc
tgcaacctcaaagagtacaaggagttcatagacaacgagatgcttttgatcctgggtcag
atggacaaggccacacttatctttgaccacgtgtacttgggctctgagtggaacgcttca
aacctggaagaactacgtgactgtggagtgggttacatcctgaatgttaccagagagatc
gacaacttcttcccagggatgttctcttatcacaacgtccgtgtgtacgatgaggatgcc
accgacctgctggcgcactggaacgacacctacaactttattgtcaaagccaagaagaac
aattccaagtgcctggtgcactgtaagatgggggtgagccggtctgcctctacagttatt
gcctatgcaatgaaagagtacagctggtctctggagaaggcctacaactttgttaagcag
aaacgcagcatagctcagccaaacgctggtttcatgagacagctggcagagtatgagggg
atcctcgatgctagcaaacagcgccacaacaagctatggaggcctgagactgatgaagag
ggatcagatgatttgcaagcctctggccactgcgctggtggggaagagacaccagtgctc
agagaggaagaagcctggggaggctgcggggcatctccctgcagaggtatgggtctggag
atggagccccttgactctctgaactataattactacttcaggcgtttgtcagactcagca
ctagacagtgagccctccaccccagtgcggggcccccctctgctgggtatggagagagtc
ttcattgagattgaggacgtggagagggacgccctgttggaggacgagggtttccctatg
gcccatttagcactgcccggtgagggcacagcagctcagacgtgtggacgtctcgacccc
ctggaggacatgagactgagactcgagttcagtactttggaggaagaggatgaggaagag
gcaaagaaagaggaagcggagatggcggccttggctcaaacgcctggaaattcggatggg
aagagggcaggggaggaggctgagaggacggaggaaagccggttgggcctagccaacctg
aacaccaacaacagcaaccgcctagctgcaaaacgcagctgccctgcagcttttgacgac
agtgctagcacaggaaaccctttaaaagtgaagccctcctatcagtcctgtaaagactgc
ctgcgtctgccacaaggccggcgttgtgaccgtccagcaggaggtcgttcccaccgcctt
aacccctcccgccattgcactgtcccttccatatgcatagatccgcccgggacaaatttt
gcttcaactccaattctgcagtccctgcctgcccctgcagttatcccgcctactttggtc
cagccctgcactcacctttaccgctgtgccacctgcgccctaggtgtcccatctttccca
tcagccaaccgccagaaactggtctcacccatgagctgtgaggacacgcctcctgaccgc
agctcagtggagacagaggacatggatgaaccgcagggcgggcacgtggaagtacaaata
tcaagggagggtacgggggccatcgacgtgactaccactgaaggtttgaagttacaacct
ggcggtgcagtggagctccagcagcaggctctggcccagctgcaaatgccaggactgggg
atagaattcggtctggaactgatgcgacagagggcggagcggcttgaaaagctgccaagc
ttggccatggagggccagctcccagtggggcccctgccttaa
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