KEGG   Lates calcarifer (barramundi perch): 108879842
Entry
108879842         CDS       T04895                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF185
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108879842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108879842
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108879842
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108879842
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 RING_XB3-XBAT31 zf-rbx1 Prok-RING_4 zf-ANAPC11 zf-C3HC4_4 Baculo_IE-1 Rtf2 zf-UDP IBR_1 zf-RING_4 CR_prot_dom_plant zf-RING_16
Other DBs
NCBI-GeneID: 108879842
NCBI-ProteinID: XP_018526773
UniProt: A0A4W6CQ53
LinkDB
Position
LG9:complement(10329121..10332568)
AA seq 193 aa
MATAAPPPASGSTAATENPSPGSSSSAAADSGNQDSTFECNICLDTAKDAVISLCGHLFC
WPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPRERTPPRPQGQRPEPEN
RGGFQGFGFGDGGFQMSFGIGAFPFGIFATAFNINDGRPPPAAPGTPQHMDEQFLSRLFL
FVALVIMFWLLIA
NT seq 582 nt   +upstreamnt  +downstreamnt
atggccaccgcagccccccctccagcctctggctccaccgcggccaccgaaaacccgagt
cctgggtccagcagctcggccgcggccgacagcggcaaccaggacagcaccttcgagtgt
aacatatgtctggacaccgccaaggatgcagtgatcagcctgtgtgggcacctcttctgt
tggccttgtttgcatcagtggttggagaccagacccaacagacaagtgtgtccagtgtgt
aaagctggcatcagtcgagacaaagttattcccttatatggtcggggaagcacaggtcaa
caagaccccagagaaagaacaccccctagaccacaagggcaaaggcctgagccagaaaac
cgaggtggatttcaagggtttggctttggagatgggggtttccagatgtcatttggaatc
ggtgcctttccatttggtatttttgccacagcttttaacatcaatgacggaagacctcct
ccagcggcccctgggactccacagcacatggatgagcagtttctgtctcgactcttcctg
tttgttgctctggtgattatgttttggctgctgattgcataa

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