Lates calcarifer (barramundi perch): 108879845
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Entry
108879845 CDS
T04895
Symbol
git2b
Name
(RefSeq) ARF GTPase-activating protein GIT2b isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108879845 (git2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879845 (git2b)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108879845 (git2b)
Endosome - Golgi transport
Arf GTPase associated proteins
108879845 (git2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
Ank_3
TTRAP
Motif
Other DBs
NCBI-GeneID:
108879845
NCBI-ProteinID:
XP_018526777
UniProt:
A0A4W6D0S4
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All DBs
Position
LG9:10530702..10546344
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AA seq
738 aa
AA seq
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MSKRVRSREVCADCSAPEPRWASVNRGVLICDECCSIHRGLGRHSSQVRHLTHSPWPPSQ
LQMVQTLYGNGANSIWEHSLLDPSSSVSGKRKANPQDRVHPNKTEFIKAKYQMLAYVHRM
PCREDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHIAAKAGQM
LQAELLAVYGADPGALDSSGKTPIDYARQAGHQELAERLVEIQYELTDRLTFYLCGRRPD
HRNGQHFIIPQMADSSLDLSEFAKAAKKKLQSLSNHQFEELAMDVYDEVDRRETDAVWLA
TQNHSTLVTDTTVVPFLPVNPEYSSTRNQGRQKLARFSAHEFATLVIDILTDAKRRQWGN
SCDSPKENVELILQGIDSRHNSESQDNDQPDYDSVASDEDPVQEATCGDSCNDGRTKSSE
SSDLSDGPITVQEFMEVKSALTASEAKIQQLLKVNCHLSEELRMMQSKLNSLQSENSTLR
WQTPSGQQHLQGPFGRHPPRGGRAMSMYETGSTPRQYPHRAETARHEDGVILQPFPTNIG
RGPLGTAASSLPTFPSSLSWSWDERSRRGCSLEGRSTMLENDCDTTPNHSELEETGSPPS
TSDAVEPEEEGEEDATLPCTEDVICKTEQITKNIQELLRAAQETKHESFLPCSEKICMAV
TEMAALFPKRPSSETVRGSLCLLTSSASRLHGECQKAADHNPCPSDIQLVTQQVIQCAYD
IAKAAKQLVTVTTKENNN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgagtacgaagcagagaggtctgcgctgattgcagtgctccggagccacgc
tgggcctctgttaacaggggtgtgttgatctgcgatgagtgctgcagcatccatcgaggt
ctggggcgacacagctctcaggtccgacatctgactcattctccgtggccaccctcccag
ttacagatggtccagacattgtatggcaatggtgctaattccatatgggagcatagcctt
ctggacccttcctcttcagtgagtggaaagcgcaaagcaaacccccaggacagagttcat
cccaacaagacagagttcatcaaggccaaatatcaaatgttggcatatgtccatcggatg
ccttgtcgggaggatgacagtgtaaccgcaaaagacctcagcaagcaactccactccagt
gttcggactggaaacctggagacctgtcttcgactcttatctttgggagcacaggccaac
ttcttccatccagagaagggaaacaccccactacacatagcagccaaagcaggtcagatg
ttacaagcagaactattggcagtctatggagctgatcctggggctctggactcaagtgga
aagacccccattgattacgcaagacaagctgggcaccaggagctggcagagaggctagtg
gagatccagtatgaactcactgaccggttaacattttacctttgtggtagaaggccagat
cacagaaatgggcaacacttcatcattccacagatggcagacagcagtctggatttgtca
gagtttgcaaaagctgcaaagaagaagcttcagtcgctaagtaaccatcagtttgaagaa
cttgccatggacgtttatgatgaagttgacagaagagaaacagatgccgtgtggttagcc
actcagaaccacagcacacttgtaactgacaccacagttgtacctttcctgcctgtcaat
ccagagtactcatctaccagaaaccagggtcgtcaaaaattggcgaggtttagtgctcat
gaatttgccaccctggtgatcgatattctaacagatgccaaacgacggcagtggggtaat
tcctgtgacagtcctaaagagaatgtggagctcatccttcagggaatagacagtcgccat
aacagtgagagccaggacaatgaccagccagattacgacagtgtggcatcagatgaagat
ccagtacaagaggccacatgtggggacagctgtaatgatgggaggaccaagagctcagag
tcatctgacctctctgatgggccaatcacagtgcaagaatttatggaggtgaagagcgcc
ctcactgcatcagaagccaaaatacaacagcttctcaaagtcaactgtcaccttagtgaa
gagctgcggatgatgcaaagcaagctgaactccctgcagagtgaaaactcaacactgcga
tggcagacccccagcggacagcagcacctccaggggccctttggccgacacccaccccgc
ggaggtcgcgccatgtccatgtatgagacgggttcgactcccaggcagtacccccaccga
gccgaaacagcacggcacgaagatggagtcattttacaacccttcccaaccaatattggg
aggggtcctttggggacggctgcttcctccctccctaccttcccctcttccctgtcctgg
tcgtgggatgagagatctcgaaggggttgtagtctggaaggacgaagcactatgctggag
aatgattgtgatactacacccaaccactctgaactggaggagactggcagccccccttca
acctctgatgctgtggaaccagaggaggagggtgaggaagatgccaccctgccatgcaca
gaggacgtcatctgtaagacggagcagatcactaagaacatacaggagcttctgagagct
gcccaggagaccaaacacgaaagctttctgccttgctctgaaaagatctgcatggctgtg
actgagatggccgccctgtttcccaagaggccgtcctcagagacggtgagaggatctctg
tgtctgctcacttcaagcgccagccggctgcatggagagtgccaaaaggctgcggatcac
aacccctgcccttcagacatccagctggtcacccagcaggtcatccagtgcgcctatgat
attgccaaagctgccaagcaacttgtcactgtgacaaccaaagaaaataacaactaa
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