Lates calcarifer (barramundi perch): 108879965
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Entry
108879965 CDS
T04895
Name
(RefSeq) homeobox protein HMX2-like
KO
K09349
homeobox protein Nkx-5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108879965
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108879965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
MMM1
Motif
Other DBs
NCBI-GeneID:
108879965
NCBI-ProteinID:
XP_018526928
UniProt:
A0A4W6CTM8
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Position
LG14:7992746..7994629
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AA seq
253 aa
AA seq
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MPGNMSKEDAPGRNASLTFTIDNILNLKERDSGGEFGGSRGQRDSGCRNDFQARCEEVWD
VRRRRDSGSEETATPRIHRADRGENTAPLTAGSCPGAQSAHSAEDASEQQQQQQQNTADT
KAMVKKKTRTIFSKRQIFQLEATFDMKRYLSSSERACLASSLQLTETQVKIWFQNRRNKL
KRQLSTDMEGPLAAEHLSDAGKNVQLPTFYKDSSLLGGCLLPMPFPVMYPTANAAPYIYF
SNTGKYFGLFDAD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaatatgagcaaagaggacgccccgggtcggaacgcttctttgacgttcacc
atcgacaacatcctcaacctgaaggagcgggacagcgggggggagtttggcggctcgagg
gggcagagggacagtggatgtaggaatgactttcaggcgcgatgtgaggaggtgtgggac
gtccggaggagacgtgacagcgggtcagaggagacagcgacgcccagaatccaccgcgcg
gaccgcggggaaaacacagcgccgctgaccgctggctcctgtcccggggcgcaaagtgcg
cacagcgccgaggacgcatccgagcagcagcagcaacagcaacagaacaccgccgacacc
aaagccatggtgaagaagaagacgcgcaccatcttctccaagagacagatatttcagctg
gaggcgactttcgacatgaagcgctatctgagcagctcggagagagcgtgcctcgccagc
tccctgcagctcaccgagacccaggtgaaaatctggttccagaaccggcgcaacaagctc
aagagacagttgtccacggacatggagggcccgctggccgccgagcacctctcagatgcg
gggaaaaatgtgcaattaccgactttttacaaagacagcagcctgctgggcggatgtttg
ttacccatgcctttccccgtcatgtacccgactgcgaacgctgcgccttacatctatttc
tccaacactggcaaatactttggcctgtttgatgcggactga
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