Lates calcarifer (barramundi perch): 108879979
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Entry
108879979 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: tectonin beta-propeller repeat-containing protein 1
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879979
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108879979
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108879979
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
108879979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
Motif
Other DBs
NCBI-GeneID:
108879979
NCBI-ProteinID:
XP_050929664
UniProt:
A0AAJ8BD95
LinkDB
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Position
LG11:12023162..12034651
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AA seq
1213 aa
AA seq
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MTSLSRCETCCTRRSLTWAIMPITLLWAVDVYGRVYSLSTAGQRWERADDMLLELKRVTA
GKGRCWGIGCDHHVYLNMMPSETPIRYREETYENQRWNPVDGFTDTLLPTDRWPWSDVTG
MNPQPLHSFQLPSRSWEWEGDWYVDQTCGGEPSQTGGWEYAVDFPANFSPDKKWNSCVRR
RRWIRYRRYIAQGTWAKIPLDNPRKPPLPLCDISCGGWEMSDQSGRYPYLWGVSQQGQVW
FREGIHPRVPEGSSWEEVEVPKEVAQLSCGPGDLLWALLWDGNLLVRTGLSLDSPTGTSW
VEVESPGKEVEALHVAVGVSVVWVVTKDYKVWFRRGVNSHNPCGSGWISIGGEMMMVDVG
LNDQVWAVGEDRGLYFRMGVTPSEPSGNGWIPVSAQWGNSKEVIPPRDDCEFSGQLTEAS
QGSVLSCTDSDSELGPSDPQNSTNDTPVLEAAAPSVVPLGGADTLTPPLEAEDAPSAPQQ
DAPKPFIPASDSFINSLVSDRDKASTSQPTITEIPQEEVEELSPAPILPTPEAVGQDVPW
MNVDLEGAEAARSAQAAGASLGDGGVAATYALGTLETSHGVGEEDGPVWTWISGGGCDVD
ASSQISWLSPAGPLTSSLSLTPVQSAAWSEQQQQQEHKEEISKKPLERSNSVWVRKGALR
WWRDCKPQRWVDVGVALEQSTKSDGRKDSIFFVYYTQYDEKKYLHVFINEVTALVPVLRD
CHYAFAVYTAQRTKQRWPLVLAAQTEKDMNDWLCLLSDCCCECRGITGPPSRQALWSTTS
KGDIMVHEPSFSLEAPANTLACDLMFWRQVPGHLRCVESNSLGLVWGIGWDGTAWVYSGR
YGQQPTPGDAVQMHQQTDVRSVHVYENQRWNPMTGYTDKGLPTDRPMWSDESGLKECTKG
NTHPPSPQWSWVSEWSVDYNVPGGTDKEGWQYAADFPVTFHGHKTMKDFVRRRRWTRKCK
ITLRGPWQQVPPIPLSDISLMPCLAQSRMEQVPVWALSDKGDVLCRLGVSPQNPAGSSWL
HVGTDQPFKSISIGGANQVWAIAKDGAVFYRGSVSQQNPAGECWYHIPSPPRQTLRQLSV
GRTSVFAVDENSNLWYRQGLTPSYPQGSAWELISNNVTKVSVGPLDQVWIIADGVPGFPT
ETAGAVCHRLGVGPMQPKGQSWDYGIGGGWEHISVRGNSAEAPRPPHPPPVGSPRSPFPM
RPPTQVNGNAVGV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctctcccgctgcgagacgtgttgcacacgacggagcctcacgtgggccatc
atgcccatcacgctgctgtgggccgtggatgtgtacggcagggtgtacagcctctccaca
gctggccagcgctgggagcgtgcggacgacatgctgctggagctgaagcgcgtcactgcg
gggaaggggcgctgctggggcatcggctgtgaccaccacgtttacctcaacatgatgccc
agtgagacccccatccgctaccgagaggagacctatgaaaatcagaggtggaacccagtc
gacggcttcactgacacactgctgcccaccgaccgctggccgtggagtgatgtgaccggg
atgaatcctcaaccgctccacagcttccagttgccctcccgcagctgggagtgggaggga
gactggtatgtggatcagacctgtggaggagaacccagccagactgggggctgggagtat
gcggtcgatttcccggccaacttctccccagacaagaaatggaattcctgtgttcgtcgt
aggcgctggatccgctacaggagatacatcgcacaaggcacttgggccaagatccctttg
gacaatccaaggaaacctccgctaccactctgtgacatcagctgtggtgggtgggagatg
agcgaccagtctggaaggtatccctacctctggggtgtgtcccaacaaggacaggtgtgg
ttcagggagggcatccacccacgggtgccagagggctccagctgggaggaggtagaagtg
cccaaggaggtggctcagttgtcatgtggtcctggagacctgctgtgggctttactctgg
gatgggaacctgctggtccgtacgggcctcagcctggacagtcccaccggcacatcatgg
gtagaggtggaatcaccagggaaagaggttgaagcccttcatgtggctgttggagtcagt
gtggtctgggtggtcactaaagactacaaggtgtggttcaggcgtggtgtgaactcccac
aatccctgtggctctggctggattagcatcggaggagagatgatgatggtggatgtagga
ctcaatgatcaggtgtgggcagttggtgaggatcgcggcctgtatttcagaatgggtgta
acgccgtctgaaccaagtgggaatggctggattcctgtttctgcccaatggggcaacagt
aaagaggttattccacctagagacgactgtgagttcagcggccaactgacagaggcctca
caaggttcagttctgagctgcactgactcagactcagagttgggtccttctgacccgcaa
aacagcactaatgacaccccagtcctggaggcagcagccccctctgtagttcccttagga
ggagctgacactcttacacctcccctggaggcagaggacgccccctcagccccccagcag
gatgcccccaaacccttcatccctgccagcgacagcttcatcaacagcctggtttcagac
cgcgacaaggcttccacatcgcaaccgaccatcacagagataccgcaggaggaggtcgag
gaactgtccccggcgcctatactcccgacccccgaggctgtgggccaagacgtcccctgg
atgaacgtggacctggagggggcagaggcggctcgaagtgcacaggcggcgggggcttcg
ctgggtgatggtggtgttgctgctacgtacgcactggggactctggagacctctcatggt
gttggggaagaggacggcccagtgtggacctggatctccggtggaggctgcgatgtggat
gcaagctcacagatcagctggctcagtcctgcaggtcctctcaccagctctctgtcactg
accccagttcagtcggcagcctggagcgagcaacagcagcagcaggagcacaaagaggag
atcagcaagaaaccactggagagaagcaactcggtgtgggtgcgaaaaggtgcgttgcgc
tggtggagggactgcaagcctcagcgctgggtggatgtgggtgttgctctggagcagtcc
accaagtctgatggcaggaaggacagcattttctttgtctattacacacagtatgatgag
aaaaagtaccttcatgtgtttataaatgaagtgacggcgctggttccagtgctcagggac
tgccactatgcctttgctgtgtacacagcccaaaggaccaaacagaggtggcctctggtc
ctggcggcacaaactgaaaaggacatgaatgactggttgtgcctgttgtctgactgttgc
tgcgagtgtcgggggatcacaggtcccccatccagacaggccctgtggtccaccacctca
aagggagacatcatggtccacgagccatccttctccctggaggctcctgcaaacacactg
gcctgtgacctcatgttctggcgccaggtcccgggacacctgcgctgtgtagagtctaac
agtctggggctggtgtggggcatcgggtgggacggcaccgcttgggtctacagcgggcgc
tatgggcaacagcccaccccgggagatgctgttcagatgcaccagcagactgatgtcagg
agtgtacatgtgtatgagaatcaaagatggaaccctatgacaggatatacagacaaaggg
cttcctacagaccgccccatgtggagtgatgaaagcgggctgaaagagtgcaccaaaggc
aacacacaccctccctctcctcagtggtcctgggtgtcagagtggtctgtggactacaat
gtccctggaggaacagacaaagaaggctggcagtacgctgcagacttccccgtgacattt
catggccacaaaaccatgaaagactttgtcaggcgcagaagatggacgaggaagtgtaag
atcacactgagaggtccatggcagcaggtcccacccatcccactcagtgacatctctctt
atgccgtgtctggcccagagcaggatggagcaggtcccagtctgggccctcagtgataag
ggagacgtcctgtgtcggctgggagtcagcccccaaaacccagcgggcagctcctggcta
catgtaggcacagatcagccctttaagtccatctccatcggcggagccaaccaggtgtgg
gccatcgccaaggatggagctgtgttctacagaggatcggtgtcccagcaaaaccctgca
ggtgaatgctggtaccacatcccctctcctccaaggcagaccctcagacagctgtctgtg
ggccggacctctgtcttcgctgtggatgaaaacagtaacttgtggtacaggcagggcctc
acccccagctatcctcagggctccgcctgggagctcatctctaacaacgtcaccaaggtt
tctgtgggaccgctggaccaggtgtggatcatagcagacggggttccaggtttccccact
gagactgcaggcgctgtctgccacaggctgggggtgggacccatgcaacccaagggccag
tcctgggactatggtatagggggaggatgggagcacatcagtgtgagggggaactcagct
gaggctcctcgccccccccaccctccacccgttggatccccacgcagcccattccccatg
cggcctccaacacaagtgaacgggaacgctgtgggtgtgtag
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