Lates calcarifer (barramundi perch): 108879988
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Entry
108879988 CDS
T04895
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108879988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879988
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108879988
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108879988
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108879988
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108879988
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_3
Ank_5
BAR_2
PH_8
PH_11
PH_21
PH_17
KxDL
Motif
Other DBs
NCBI-GeneID:
108879988
NCBI-ProteinID:
XP_018526955
UniProt:
A0AAJ7PIT1
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All DBs
Position
LG14:complement(8356162..8375347)
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AA seq
765 aa
AA seq
DB search
MTVKLDFEECLKDSPRFRADIEVVQNDVSELETRLDKLVKQCQAMLEAGRVYCQTSKSFV
NGLRELGHQCPGDKMMEECLDKFSRRLSDILEAQGEVIETTQKSVKLKLQNFVKEDVRRF
KDVRKEFERSSETLEGALAKNAQAPRGKQHEVEEASNALLNARRTFRSEALDYVLEINVI
EAKKKTDILSAMLSMMEAQAQFFQHGHQSLSELDEYRRKLNEEHTQFVLNSAREKRDMEQ
RHAAIKKKDVSYDDSIMDFNADAANGIAMEGYLYKRASNAFKTWSRRWFSIQKNQLVYQK
KFKDQPTVVVEDLRLCTVKPSTENERRFCFEVVSPSKCCLLQADSERQQQAWISAVQNSI
ASAFQEHREDPLSPRQRCSSVSAGTMGGGGGGGGGDQENEGRKALDEVQAIPGNRQCCDC
GEPGPDWASINLGITLCIVCSGIHRSLGVHFSKVRSLTLDSWEPELIKLMCELGNTVINR
IYEARIDEITIKKPHPSSPRGDKESWIRSKYVEKKFIQKLPETGRNPPLRRSSARRNRAT
TQDRGVQRPPLKPKPNRATLPRVTGLSPSDLQKNNTSFYKDMDEEEEDLSGLHPGALLYR
SAALQNFPVMADALAHGADVNWVNVAEDSSTPLIQAVSANALAACEFLLQNGANVNQADS
NGRGPLHHATIFGHTGLVCLFLKRGADYNARDKNQKDPITIAVDNANADIVTLLRIAKMN
KEMREMDGAFGQSGDETYQDIFRDFSHMASNNPEKLKRRSADPKS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaagctggactttgaggagtgtttgaaagactctccacgcttcagagcggac
atcgaagtcgtccaaaacgatgtgagcgaacttgagacacgattagacaagcttgtgaaa
caatgccaggccatgctggaggcgggcagagtctactgccagaccagcaagagctttgtc
aacggcctccgggagctgggacaccagtgtcctggggacaagatgatggaggaatgtttg
gacaaattttccagaaggctgtctgatatcttggaggcacagggggaggtgattgagacc
acacagaagtcagtcaagttgaagctgcagaactttgtgaaagaagatgttcgtcggttc
aaagatgtgcgcaaggagtttgagcgcagcagcgaaaccctggagggggcgctggcgaaa
aacgctcaggccccacgggggaagcaacacgaagtggaggaggcgagcaatgctctgctc
aacgcacgcaggacctttcggtctgaggctttggactacgtcctggagattaatgtcatt
gaggccaagaagaagacagacattctgtcagcaatgttgtcaatgatggaggcccaggcc
cagttcttccaacacggccaccagtctttgtcagaactggacgagtatcgacgaaaactg
aatgaagagcacactcagtttgtcctaaactcagccagagagaagagggacatggagcag
agacacgccgcaatcaagaaaaaggatgtctcctacgacgactccatcatggatttcaat
gctgacgcagctaatgggatcgccatggagggatacctctataagagagccagcaacgcc
ttcaagacctggagcaggcgctggttttcaattcaaaaaaatcagctggtgtatcagaag
aaattcaaggaccagcccacagttgtggtggaggacttgcgtctttgcacagtcaagccc
agcactgaaaatgagagacggttctgctttgaagtggtctccccgtcaaagtgttgtttg
ttgcaggcggactcagaaaggcagcagcaagcatggataagtgccgtccaaaacagcatc
gcctcagcttttcaggagcatagagaggacccactcagcccgagacagcgctgcagctcg
gtgtcggcgggcactatgggaggcgggggaggaggaggaggcggcgatcaagagaacgag
ggccgcaaggcgctggacgaggtccaggcgatcccggggaaccggcagtgctgcgactgc
ggagaacccggtcctgattgggcctccatcaacctgggcatcacgctttgtatcgtctgc
tcgggaatccataggagcctgggagtccatttctccaaagtacgctccctcactcttgac
tcctgggagccagagctcattaagttgatgtgtgaattaggaaacacagtaatcaacagg
atctatgaggcccggattgatgagatcaccatcaagaaaccacatccctccagtcccaga
ggagacaaggagtcgtggattagatcgaagtacgttgaaaagaagttcatccaaaagctg
cccgagaccggccggaaccccccgctgaggagatccagtgccaggaggaaccgggcaacc
acgcaggaccggggcgttcagcggccaccgctcaaacccaaaccgaaccgagccactctg
cctcgggtcacagggctcagccccagtgaccttcaaaagaacaatacaagcttttacaaa
gatatggacgaggaagaagaggatctgagcggacttcaccccggagcgctgttgtaccga
tcggcggccctgcagaacttccccgtcatggccgacgctctggctcatggagccgacgtt
aactgggtcaatgtggccgaggactccagcacgccgctgatacaggccgtctcagcgaac
gccctggcagcctgcgagttcctgctgcagaacggtgccaacgtcaaccaggccgacagc
aacgggagaggaccactgcaccacgccaccatctttggtcacactgggttggtttgtctc
ttcttgaagcgaggtgcagactacaacgccagagacaagaaccagaaagaccccatcacc
atcgccgtggacaacgccaacgccgacatcgtcactctgctgcggattgccaaaatgaac
aaggagatgcgggagatggacggagcgtttggccaatcaggtgatgaaacctaccaggac
atcttcagagacttttcacacatggcctcaaacaaccccgagaagctcaaacgccgtagc
gcagaccccaaatcctaa
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