Lates calcarifer (barramundi perch): 108880190
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Entry
108880190 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein SON
KO
K23718
protein SON
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108880190
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108880190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G-patch
dsrm
DND1_DSRM
RSRP
G-patch_2
Motif
Other DBs
NCBI-GeneID:
108880190
NCBI-ProteinID:
XP_050921891
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All DBs
Position
LG7_2:12385089..12401985
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AA seq
969 aa
AA seq
DB search
MAANIEQIFQDFILSKIREIEDQNEDKSAGEGVGAGSELDGAQKATSEREKQEDFRGSGS
QKKHKKHKKHRSKKKKRNREKESSSESAAELEGGIKHQPRRGTPTEVNKEQSEAKKSKSK
CHKRHSTGKRKKKRRRRKGEENSSDSDSEYVSKQRDSKNLSPRRREELPDIIPKQDSSNK
GRRDEERHGRRSCRRSRSQSHSDHRSHSCSARRSSRTRCRHHHRRSRTRSLSSSRRHRTW
SSSSEKRGALDESLQFPQGPSESLQPPQLASSPSQRDIKVEELTESSTAGLQSPEQCEKP
AEKKEEKAEDTTQKLAAGCGTSQSRTAEPHQTTEPGFPQLKASEDPATSVKSPAKKKRKA
PKSPERVKEGKSSKRQRRSKSPGRSHRRGSRSRSPSRTRSRSRSGGRRSWRSRSRSASRG
RRRATYSQRDRWKREPSHSPVLILRKNRSPTRKNCSSSNSPQRISELDKEQLLEIAKANA
AAMCAKAGMPIPAGLRSTVLPLALPSMAMNAAMAGMTAATMTAALSNMGTLSSLLSLPSI
TNKPSPAAAQPNIAALEEVKRKVAKQAXQHXIKEFTDKCKMIVDSKGELPVAVPHISDEE
EDGKPFGGSALREQKAISFSINNTTVRPAVRSDAGMAKEFPVSSGSQHRKKEGEALGAYG
EWVPVDKTDKVAAVSRKALTTAPVAPAAPSSSCETEAEGSPEAVEQPAFGSLKDSVFPDP
LTQPVDISQAVTERIKAQRRLAENPYDVSAICMLSRAQEQVDAWAQSNTVPGLFTGSTGA
QVLSSEELSTSGPQAWLKKDQFLRAAPVSGGVGEFLMRKMGWKTGEGLGRNREGTVEPII
IDFKVDRKGLVAEGEKPQKQTGGLVVTKDLMGKHPVSALIELCNKRRIMQPDFVMVHHSG
PDHRKNFLFKVTVNGVDYQPQTASPNKKHAKAMAATVALQALGEVPVDGPGLYTGPVFTA
ASTGPLFST
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatagagcaaattttccaagattttatattgagtaaaatcagagaaatc
gaagaccagaatgaagacaaatctgctggtgaaggagtgggtgctggcagtgagttggat
ggagcacagaaagccacttcagagagagagaaacaggaagacttcaggggcagtggatca
caaaagaaacacaagaagcacaaaaaacacagaagtaagaagaagaagaggaatcgagag
aaggagagcagttcagagtctgctgcagagctggagggaggaatcaaacatcagccaaga
agaggaacaccaacagaggtgaataaagagcaaagtgaggctaagaagagtaaatccaaa
tgtcacaagcggcattcaacgggaaagaggaagaaaaagaggaggaggaggaaaggtgaa
gagaactcgtcagattcggactcagagtacgtgtcaaagcagagggatagtaaaaacctg
tcaccaaggagaagagaggagctgcctgatatcatccccaaacaggatagttccaataaa
ggaagaagagatgaggaaagacatggcaggaggagttgtcgtcgttcccgttcgcagtca
cattccgatcatcgttcacattcctgctcagcgaggaggagctcacgcacacggtgtcga
caccaccaccgaaggtctaggactcgctccttatccagttcacggcgccacaggacctgg
tccagctcctctgaaaagaggggagctttggatgaatccctacagttcccccaaggtccg
tcagaaagcctccagccgcctcagctggcctccagccccagccagagagacatcaaagta
gaggagctgacggagtcgagcacagccgggctgcagagccctgagcagtgtgagaagcca
gcagagaaaaaagaagagaaagcagaggacacaacacaaaaactagctgcaggttgtggc
acatcccagtccagaactgctgaacctcaccagaccacagagcccggcttccctcagctt
aaagcgtccgaagaccccgccaccagtgttaaatcaccagcaaagaagaagaggaaagca
cccaaatccccagagagggtcaaagaaggaaagtcgtcaaaaaggcagaggagatccaag
tcaccgggtaggagccacaggaggggatccagatcgaggagcccttcaaggacaagatca
cgatcgaggtcaggaggccggaggtcgtggaggtcacgttcacgctcagcgtcgcggggc
cggaggagggctacgtacagccagagagaccgatggaaacgagagccgagtcactcccct
gtcctcatcctccgtaaaaatagatcccccaccaggaagaactgcagttcgagtaacagc
cctcagcgcatcagtgaactggataaggagcagttgttggaaattgccaaggccaatgct
gctgctatgtgtgccaaagcaggtatgcccatccctgctggcctgaggtccacagtactt
cccctggctctgccaagtatggccatgaatgctgcgatggccggtatgacagctgccacc
atgacagcagccttgtctaacatgggcactctgtcttcactgctctcactgccctccatc
accaacaaaccatctcctgccgctgcacaacccaacattgctgccttggaggaagtgaag
aggaaagtagcgaagcaggcctaacagcattagattaaggaatttactgataaatgcaag
atgatcgtggacagtaaaggagagctgccagtggcagtgcctcatatttcagacgaagag
gaagatgggaaaccctttggaggatcagctcttcgcgagcaaaaggccatcagcttcagc
atcaataacactacagttcgtccagcagtgcgcagtgatgcaggcatggccaaagagttt
cctgtgtcctcaggatcgcaacaccgcaagaaggagggcgaggcgttgggagcctatgga
gaatgggttccagttgacaaaacagacaaagtggcagctgtgtccagaaaggccctgacc
actgctcccgtagcgccagcagccccctcatcatcgtgtgaaacagaggcagaaggatca
ccagaggccgtcgaacagccggcgtttgggtcccttaaggacagcgtttttcctgaccca
ctaacacagcctgtagatatctctcaggctgtaactgagagaatcaaagctcagaggcgt
ttggctgagaacccctatgacgtcagtgccatctgcatgctcagccgggcacaggagcag
gtggatgcatgggcccaatcaaacactgttcctggcctcttcactggttcaactggagcc
caggtccttagctcagaggagctgtccaccagcggaccacaagcatggctgaagaaggac
cagttcctcagggcagctccagtatcagggggtgttggggagttcctcatgaggaagatg
ggctggaagacgggagagggcctggggaggaaccgggagggtaccgtggagcccatcatt
attgacttcaaggtcgaccgcaaaggactggttgctgaaggagagaagccacagaagcag
acgggaggactggtggtgaccaaggatctaatggggaagcacccggtgtcggctcttatc
gagctgtgcaacaagaggcggataatgcagccagactttgtcatggtccatcacagtggt
cctgaccaccgcaagaattttcttttcaaggtgacagtgaatggtgtggactatcagccc
cagacagccagccctaataagaaacatgccaaggccatggcagctacagttgccttgcag
gctctgggagaggttcctgttgatggtccaggactctacactggccctgtcttcactgct
gcttctactggccccctgttctctacatag
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