Lates calcarifer (barramundi perch): 108880207
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Entry
108880207 CDS
T04895
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108880207
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108880207
TFIIIC, fungi type
108880207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_19
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_9
TPR_7
TPR_10
ANAPC3
TPR_20
HAT_PRP39_C
ChAPs
SHNi-TPR
Sel1
Motif
Other DBs
NCBI-GeneID:
108880207
NCBI-ProteinID:
XP_018527146
UniProt:
A0AAJ7PIY0
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Position
LG7_2:12310825..12323141
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AA seq
944 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDRRRDERRAKESGVSAEEVEDDAQPSTSAQIPAKIEEGV
SPGVQLAFASMLGETPEPPSSEEEGDEEEEDTLSYVDDEDDEDYKVDEEEGEKAEVGLEE
KKQQRQAGRGGRGAGRRRRRKKEEEVEDLTVGDVFALEMELNRENKKMMKERRHRSKLPR
ALRGLMGEANIRYARGEKEDAILMCMEIIRQAPLAYEPFSTLAMIYEDDEDMDKALQFSL
IAAHLNPSDCEEWIRLAEMSLEQDNIRQAIVCYTKAIKYDPTNVRYLWERSSLHMRLGEH
KQCMDGYRRILLLLPMEDGEHFMQLSKDMAKSYYESNDLPSALSVIEEALARHPTLVSDD
FINMAAELYISSRQYNKALQVLVQFAGIVLVRAESESDLTVKTQEEKVVEKTEEEQEKKN
EEGATTEEEITAEENSAIKHVQVPDTVPVDLRAKLIVCLIHLHVYSPVESLVQLLMEQSP
EEIGDLYLDVGEAYLEEGEYMSALPLLSSLVISDKYNLAVVWLRHAECLKALGLMEAAAD
SYTKVVEMAPQHLEARLSLATLQQQLGKPECALKALESMYDSDTLSQDSSAAQKELKLLL
HRSTLLKTQGQIQDYLDAMITMISMLLKVAMQRAEVSVRSVMVSGKNHLRLMKVKDMQPE
IADHEAAYLDNTGKTNVLSREDWWQLLVSCVLTLCEVQRYEEAELLVESAMEFYSFYDNK
PRRKELEFFGLSATILDHNYYKAYNYIRLMLMENVDLPQLWNIFNQLTITSQHQRHHRFC
LRLLLKHPDNHALCVLCGHNAMVSGSFKHALGQYVQAFQTHPNNPLHSLCVGLTFFHMAS
QKYVAKRHTLVLQGFSFLWRYVELRGECQESMYNLGRALHQMGLTHLAIHYYQKALTLPA
QKLEGISDDQVDLRREIAFNLSLIYQASGNIEIARQLINTHCIV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttcagtgctgagcttatagactacctggagggtaggataacttttgaggag
ttcgacagaaggagggacgagcggagggcaaaggagtcaggggtatcagctgaagaggtg
gaggatgatgctcagccctcgacgtcagcacaaatcccggcgaaaatcgaagagggagtc
agcccaggggtccagctggcctttgcctccatgctgggggaaacaccagagccaccatct
tccgaagaggagggagatgaggaagaggaagacaccttgagctacgttgatgacgaagat
gatgaggattacaaggtggacgaggaggagggagaaaaggcagaggtggggctggaggag
aagaagcagcagaggcaagcaggaagaggagggagaggagcggggaggaggaggaggagg
aagaaagaggaggaggtggaggatctgacggtgggagatgtgttcgcactggagatggag
ctgaaccgagaaaacaagaagatgatgaaggaaaggcgtcatcgcagcaagctgccccga
gctctgagaggcctgatgggagaagccaacatccgctatgccagaggagagaaagaggac
gccattttgatgtgtatggagatcataagacaagctcctctggcttatgagcctttctct
acgttggctatgatttacgaggatgatgaagacatggacaaagcgctgcagttcagtctg
atcgccgcccacctgaacccctcagactgtgaggagtggatcagactggctgaaatgtct
ctggagcaggacaacatccgacaggccatcgtctgctacaccaaagccatcaagtacgac
cccaccaacgtgcggtacctgtgggagcgctccagcctccacatgcgtctgggtgagcac
aagcagtgcatggacggctaccgcagaatcctcttactgctgccgatggaggacggagag
catttcatgcagctctccaaggacatggccaagagttactatgagagtaatgacttacct
tcagctctgagtgtgatagaggaagctctggcgcgacaccccaccctggtcagcgatgac
ttcatcaacatggcagctgagctctatatttccagtcgccagtacaacaaggccctgcag
gtcttggtccagtttgcaggcattgttttggtaagggctgaatccgaatcagacctcacg
gtgaaaacacaagaggagaaagtggtagagaagacggaagaggagcaggagaagaagaat
gaagaaggtgcaacgactgaagaggaaataacagctgaggagaacagtgcaattaaacat
gtccaggtaccagacactgtccccgtggacctgagggccaagctaattgtctgcctcatt
cacctgcatgtctacagtcctgtggagagcctggtgcagttgctgatggagcagagtcca
gaggagattggtgacttgtacctggatgtaggtgaagcctacctggaggagggcgagtac
atgtctgctctgcctctgctgtcttccctcgtcatatccgacaagtacaacctagctgtc
gtctggctccgacacgcagaatgtctgaaggcgctgggcctcatggaggcagcagcagac
agctacacgaaggtggtagagatggccccgcagcacctggaggcccggctctccctggcc
accctgcagcagcagctgggcaagccagagtgtgccctcaaggccctggagtccatgtac
gacagtgacacactgtcacaagactcgtcagctgcacaaaaggaattaaagctgctgctg
catcgttcgacactactgaagactcagggacaaatacaggattacctggatgctatgatc
accatgatctccatgctgcttaaggtggccatgcagcgagcagaggtgagtgtacgctct
gtaatggtgtctggtaagaatcacctgaggctgatgaaggttaaagacatgcagccagag
attgctgaccatgaagctgcctacctggacaatactggtaaaaccaatgttctgtccaga
gaggactggtggcagctgctggtgagctgcgtgctgacgctctgtgaggtgcagcgctat
gaagaagccgagctgctggtggagtcggccatggagttctactccttttatgacaacaag
cccaggagaaaggagttggagttctttggcctgtctgccaccatcctggaccacaactac
tacaaagcctacaactacatcagattgatgctgatggaaaatgtggatctgcctcagctg
tggaatattttcaaccagctgacgataacctctcagcaccagcgccaccatcgcttctgc
ctgcgtctgctgttaaaacacccagataatcacgccttgtgtgtcctctgtggacacaat
gccatggtgtcagggagcttcaaacacgctctgggccagtatgttcaggccttccagact
caccccaacaacccactccacagcctgtgtgtgggtctcaccttcttccacatggcatct
cagaaatacgtagccaaacgacatacactggtgctgcagggtttctccttcctgtggaga
tatgtggaactgcgtggagagtgtcaggagagcatgtacaacctgggcagagcgctgcac
cagatgggtctcacacatttggccatacattactaccagaaggcacttacactgcctgca
cagaaactggagggcatttctgatgatcaggtggatctgaggagggagatcgccttcaac
ctgtcactcatctaccaggccagtgggaatatagagatcgcccggcagcttatcaacaca
cactgcatcgtttga
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