Lates calcarifer (barramundi perch): 108880218
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Entry
108880218 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar protein 58
KO
K14565
nucleolar protein 58
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108880218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108880218
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108880218
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Gene cluster
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
108880218
NCBI-ProteinID:
XP_050921940
UniProt:
A0AAJ8DK10
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Position
LG7_2:complement(11890195..11895489)
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AA seq
533 aa
AA seq
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MLVLFETAAGYAIFKVLDESKLQQVDSLYKEFETPEKANKIVKLKHFEKFQDTTEALAAA
TALVEGKIGKSLKKVLKKVVAKEAHEQLAISDAKLGGVIKDKLDLSCVHSPAVAELMRCI
RSQMESLITGLPPREISAMSLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNY
IMRCREWYGWHFPELGKVVTDNLAYCKTVRKIGDRTNVASSDLSDVLPEEIEAEVKLAAE
ISMGTEVSEQDIGNIRHLCDQVIEISEYRTQLYDYLKNRMMAIAPNLTVMVGELVGARLI
SHAGSLLNLAKHPASTVQILGAEKALFRALKTRKDTPKYGLIYHASLVGQTTAKNKGKIS
RMLAAKAALAIRYDALGEDTNAEMGAENRAKLEARLRQLEEKGIRRISGTGKAMAKADKY
QHKSEIKIYDPSGDSTIPSTSKKRKFEEEEEEAEEPVTPVVKPKKPKKELVTEEEEAEAE
ETPKKKKKKKKDKKEEAEAEEPKGEEEEVAVTESTEKKKKKKKKKVKEEEDDD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgttatttgagaccgccgcaggttatgcgatatttaaggtcctcgatgaatcc
aagttgcaacaggtcgacagcctgtataaagagtttgaaactcctgaaaaagcgaacaaa
attgtgaagctgaagcactttgagaagtttcaagacacaacagaggccttagcagctgcc
actgcccttgttgagggaaaaattggcaagagtttgaagaaagtgctgaagaaggtggtc
gccaaggaggctcacgagcagctggcaatcagcgatgcaaaactcggtggagttatcaaa
gacaagctggacctgagctgtgtccacagccctgctgtggctgaactgatgagatgcatc
aggagccagatggagagtctcatcactggacttccacccagggagatcagtgccatgtct
ctggggttggctcacagtttatcacgctacaagctgaagttcagtccagacaaagtggac
actatgattgtgcaggccatctctcttctggatgacctggataaggagctcaacaactac
atcatgcgctgcagagagtggtacggctggcacttccctgagctgggaaaagtggtcaca
gacaacttggcttactgcaaaaccgtccgcaaaatcggtgatcgcacaaacgtggccagc
tctgatctgtcagacgtcctccctgaggaaatcgaggcagaggtgaaactggccgctgag
atctccatgggaacagaagtgtcggagcaggacatcggcaacattaggcacctgtgtgat
caggtgattgaaatttcagaataccgcactcagctgtacgactacctaaagaaccgaatg
atggcaatcgctcccaacctgacagtaatggtgggcgagctggttggcgcccgactcatc
tcacatgctggttctctcctgaatctggcaaagcacccagcctccactgtgcagatcctc
ggagcagagaaggctctgtttagagccctgaagacccgcaaagacacacccaagtacggt
ctcatataccacgcctctctagtgggccagaccactgccaagaacaagggcaagatctcc
agaatgctggcagccaaagcagccctggctattcgctatgacgccctgggagaggacacc
aatgcagaaatgggagcagagaaccgtgccaagctggaggccaggctgcggcagctggag
gagaagggaatccgaagaatcagtggaacaggcaaagcaatggcaaaggcagacaaatac
cagcacaagagtgaaataaaaatttacgatccatctggcgattctactattccatccacc
tcaaagaagaggaaatttgaggaggaggaggaggaggctgaagagcctgtaacacctgtg
gtcaaacccaaaaagcccaaaaaggagctggtaacagaagaggaggaagcagaagcagag
gagactcccaagaagaagaagaagaaaaagaaggataagaaagaggaagctgaagctgag
gagccaaagggggaagaggaggaggtagcagtaacagagtcaacagaaaagaagaaaaag
aagaagaaaaagaaagtaaaggaggaagaagatgatgactga
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