Lates calcarifer (barramundi perch): 108880225
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Entry
108880225 CDS
T04895
Symbol
abcb11b
Name
(RefSeq) bile salt export pump isoform X2
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108880225 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108880225 (abcb11b)
04147 Exosome [BR:
lcf04147
]
108880225 (abcb11b)
Transporters [BR:
lcf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
108880225 (abcb11b)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108880225 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
AAA_16
AAA_29
AAA_15
AAA_30
AAA_21
Rad17
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
108880225
NCBI-ProteinID:
XP_018527193
UniProt:
A0AAJ7LMA3
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All DBs
Position
LG7_2:complement(11512428..11539061)
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AA seq
1359 aa
AA seq
DB search
MPTGSVKLQSIKKLGQENHSYEVSDDEPAGSYMTMTTSKEEEKAQGKAEQPAIRVGFFQL
FRFATCNEVLMMVVGSVCAVLHGSAQPLMLLVFGLLTDTFIEYDIELNELSDERKECVNN
TIQWKQNYTTAWPSFNTSLNQSVWGLMNNSTQKARPCGILDIEYEMTQFAFYYVGIGAAV
FLLGYFQISLWVTAAARQIQLIRKMYFSKVMRMEIGWFDCTSVGELNTRMSDDINKINDA
IADQVAIFLQRFTTFVCGFCIGFVKGWKLTLVIVAASPLIGIGAGLMALFVAKLTGMELQ
AYAKAGAVADEVLSSIRTVAAFGGELKEVERYDRNLVSAQSWGIRKGLIMGFFTGYMWLI
IFLCYGLAFWYGSSLVVDTEEYTPGTLLQVFFGVLIAAMNLGQASPCLEAFAAGRGAATI
IFETIDREPEIDCLSEAGYKLNRVKGDIEFHNVTFYYPSRPDVKILDQLSVAVKSGETTA
FVGPSGAGKSTAVQLIQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTI
AENIRYGRPDVSMDDIITATKEANAYNFIMELPQKFDTLVGEGGGQMSGGQKQRIAIARA
LVRNPRILLLDMATSALDNESEAVVQEALDKVRMGRTTISIAHRLSTIKNADVIVGFEHG
RAVERGKHNELLERKGVYFTLVTLQSQGDKALNEKARQMADSEEEPERLSLSRAGSYRAS
LRASIRQRSRSQLSNLIPESSVPVTGELGPRAYAVTQADKSKNAIPEEEEEELVEPAPVA
RILRYNIPEWPYMLFGSFGAAINGGVNPVYSLLFSQILATFSVTDPVAQRKEIDSICLFF
VMVGVVSFFTQMLQGYAFSKSGELLTRRLRRLGFHAMLGQEIGWFDDHRNSPGALTTRLA
TDASQVQGATGSQIGMIVNSLTNIGVAICMSFYFSWKLTLLILCFLPFIALSGGFQAKML
TGFAKQDKQAMEAAGRISGEALNNIRTIAGLGKERNFVDMYEAQLDAPYQAALKKANVYG
ACYGFAQCVVFLTNSASYRFGGYLVRQEGLHFSLVFRVISAIVTSGTALGRASSYTPDYA
KAKISAARFFQLLDRVPQISVYSDKGDKWDNFQGNIEFIDCKFTYPTRPDIQVLNGLNVS
VKPGQTLAFVGSSGCGKSTSVQLLERFYDPDHGRVLIDGHDSTRVNVPFLRSKIGIVSQE
PILFDCSIAENIKYGDNSREISMNEVISAAKKAQLHSFVMSLPEKYDTNVGAQGSQLSRG
QKQRIAIARAIIRDPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQN
SDIIAVMSRGFVIEKGTHDQLMAVKGAYYKLVTTGAPIS
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgccgactggatcagtgaaattgcaaagcattaagaaactgggacaggaaaaccacagc
tacgaggtttcagatgacgaaccagctggctcttatatgaccatgacgacttccaaggag
gaggagaaagctcagggaaaagcagaacaaccagcgataagggtcggcttctttcagctg
ttccgtttcgccacatgcaacgaggtactaatgatggtggtggggagtgtgtgcgcggtg
ctgcacggctcggcccagcccctcatgctgctggtgttcggcctgctcaccgacaccttc
atcgagtacgacatcgagctcaacgagctgagcgacgagaggaaggagtgtgtgaacaac
actattcagtggaagcagaactacactacagcgtggccttccttcaacacatcactgaac
cagtcagtctggggcctcatgaacaattcaacacagaaggccaggccgtgtgggattctt
gacattgaatatgagatgacccaatttgccttctattatgttggaatcggagcagctgtg
ttcttgctaggatacttccagatctccctgtgggtgacggctgctgccagacagattcag
ctcatcagaaaaatgtacttcagcaaagtgatgaggatggagatcggctggtttgactgc
acctctgtgggggagctcaacactcgcatgtcagatgacatcaacaagatcaacgatgcc
atcgcggatcaggttgccatttttctccaacgcttcaccacctttgtgtgcggcttctgc
attggctttgtgaaaggatggaagctgacacttgtcattgttgcagcgagtccactcatc
ggtattggagctggtcttatggctctgtttgtggctaagctaacagggatggagctgcag
gcctatgctaaagctggagctgtagctgatgaggtgctctcctccatcaggactgtggct
gctttcggtggagaactaaaagaagtggagaggtacgacaggaacctggtctcagcacag
agctggggcatcaggaagggtctgattatgggctttttcactggatatatgtggctgatt
atcttcttgtgctacggtctggccttctggtatggctctagcctggtggtggacactgag
gagtacacaccaggaacactactgcaggtgttctttggcgttttgatcgcagccatgaat
ttggggcaggcctctccgtgtctggaggcgtttgctgcaggccgcggcgctgccaccatc
atctttgagactattgacagagagccggagattgactgtttatctgaggctggatataag
cttaacagggtcaaaggagatattgagtttcacaatgtgaccttctactacccgtccaga
cctgacgtcaagatcctggaccagctcagtgttgcagtgaagtcaggggagaccacagcc
tttgttggtcctagcggagctgggaagagtactgctgttcagctcattcagcgcttctat
gaccctaaagagggcatggtgaccctggacggccacgacatcagaggcctgaacatccaa
tggctgcgctcgctgatcggcatcgtggagcaggagcccgtgctgtttgccaccaccatc
gccgagaacattcgctacggtcgacccgacgtgtccatggacgacatcatcaccgccacc
aaggaggccaacgcctacaacttcatcatggaactgccacagaaattcgacaccttggtg
ggggagggtggaggtcagatgagcggaggccagaagcagcgtattgccattgctcgagcg
ctggtcaggaatcctcgtatcctgctgctggacatggcgacctctgccctcgacaacgag
agtgaggctgtagttcaagaggccttggataaagtccgcatgggtcgcaccaccatctcc
attgctcaccggctctccaccatcaagaacgctgatgtgatcgtcggcttcgagcacggc
cgggccgtggagaggggcaaacacaacgaactgctggagaggaagggagtctacttcacc
ctcgtgaccctgcagagtcaaggagacaaggctctgaacgagaaggctcgacagatggct
gacagtgaagaagagccagagaggctgagtctatccagagcaggcagctatcgtgccagt
ttgagagcctcgatccgccagcgctcccgatcccagctgtccaacctgatcccagagtct
tcggttcccgtcaccggagaactcggccccagagcctacgctgttacacaggcagacaaa
tccaagaacgccatcccagaggaggaggaggaggaactcgtggagcctgctcctgttgcc
aggatcctgaggtacaacatccctgagtggccatatatgctttttggatcctttggagct
gcaataaacggaggagtcaaccccgtctactctttactgttcagtcaaatcttggcgaca
ttctcagtaacagatcctgtggctcagaggaaggagattgatagtatctgcctgttcttt
gtcatggttggcgtggtgtctttcttcacccagatgctgcagggttacgctttctccaag
tccggagagctgctgacccgtaggttgcggcggctcggcttccacgcaatgctgggccaa
gagatcggctggtttgatgatcacaggaacagccccggagctctgaccacacgtctggcg
actgatgcctcacaagttcaaggggccacaggctcacagatcggcatgatcgtcaactcc
ctgaccaacatcggcgtggccatctgcatgtccttctacttcagctggaagctgacgctg
ctcatcctgtgcttcctgccattcatcgctctgtcgggaggcttccaggccaagatgctc
acaggcttcgcgaagcaggacaagcaggccatggaagctgccggacggatttctggcgag
gctctgaacaacatccgcaccatcgcaggtctggggaaggagaggaattttgtggacatg
tacgaggcccagctggacgccccgtaccaagcggccttgaagaaggccaacgtgtacggc
gcctgctacggcttcgcccagtgcgtcgtcttcttgaccaactcggcctcgtacaggttc
ggaggttacctggtgcggcaggaggggcttcacttcagcctggtgttcagggtcatctcc
gccatcgtcaccagcggcacagccctgggcagagcctcctcctacaccccggactacgcc
aaggccaagatctcagccgcacgtttcttccagctgctggaccgtgtgccccagatcagc
gtttacagcgacaagggagataaatgggataacttccaagggaacattgaattcatcgac
tgtaagttcacctaccccaccaggccagacatccaggtcctgaatgggctgaatgtgtcg
gtgaaacctggccagacgttggcctttgtgggaagcagcggttgtgggaagagcaccagt
gtgcagctgctggagaggttttatgatcctgaccatggcagagtgctgattgatggccat
gactcgactcgtgtcaacgtgcccttcctgcgttctaagattggcatcgtgtcccaggag
cccatcttgtttgactgcagcattgcggagaacatcaaatacggcgacaactcccgggaa
atcagcatgaatgaggtcatctctgccgccaagaaagcccagcttcacagcttcgtcatg
tcgcttcctgagaaatacgacaccaatgtgggcgctcagggttctcagctgtctcgtggt
cagaagcagcgcatcgccatcgccagggcgatcatacgtgaccccaagatcctgctcctg
gacgaggccacctctgcgctggacaccgagagcgagaagacagtgcaggaagccctggac
aaagccagagagggccggacctgcattgttatcgcccatcgcctgtccaccattcagaat
tctgacattatcgctgtcatgtccagaggctttgtgatcgagaaaggaacgcatgaccag
ctcatggctgtgaagggagcttactacaagctggttaccacgggagcaccaatcagctaa
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