Lates calcarifer (barramundi perch): 108880247
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Entry
108880247 CDS
T04895
Name
(RefSeq) neuronal-specific septin-3 isoform X2
KO
K16938
septin 3/9/12
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108880247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108880247
04812 Cytoskeleton proteins [BR:
lcf04812
]
108880247
04147 Exosome [BR:
lcf04147
]
108880247
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Sperm associated proteins
108880247
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
108880247
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108880247
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
GTP_EFTU
Roc
Dynamin_N
AAA_16
Ras
AAA_22
ABC_tran
NB-ARC
URGCP_GTPase
AAA_29
FtsK_SpoIIIE
IIGP
AAA_14
G-alpha
Sigma54_activat
P-loop_TraG
AAA_7
GBP
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
108880247
NCBI-ProteinID:
XP_018527218
UniProt:
A0A4W6DX54
LinkDB
All DBs
Position
LG11:12254337..12389686
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AA seq
634 aa
AA seq
DB search
MKKSSYPARSASARTRRTEREGSGITSPTLKRSFEVEETDTSTHPSPLSRRTTNPLRSST
SSTSSQRSYDLSSRNSDYSSSRSSPSESSNPRSPKTGMRRIELSGGRNPDIASSRRTEIS
IEVSSKQIDNSPSAGIARFGLKRPEVSLSSRSTPLDSSSNSISSSTNRRAELSMTRSHEP
PAPPRRMDAQLSSAPVSRIPEPPQRRAEPPSPILSPAEGASRRPEMPVFRQPDGLVPGSA
MENNNHPPPAPSAPLPSLSEPRVERVQSPVMEAPTARPTDRPEVISSYSGSAMSEAAVPD
AMVSTAVGGLYGEKASGPTVDFSYVGIDAILEQMRRKAMKQGFELNIMVVGQSGLGKSTL
MNTLFKSKVSRKSVLATSQEKIPKTIEIKSISHDIEEKGVRMKLTVIDTPGFGDQINNEN
CWQPIMKFINDQYEAYLQEEININRKKRIPDSRVHCCIYFIPPTGHCLRPLDVEFMRRLS
KVVNIVPVIAKADTLTLEERDFFKKKIREELRANGIDVYPQKEFDEDAEDRMINEKIREM
IPFAVVGSDQEYQVNGRRLLGRKTKWGTIEVENIAHCEFAYLRDLLIRTHMQNIKDITSS
IHYEMYRVRRLNENNTVVAHANGIPEHHLAAHEM
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcttcatatccagcaagatcagccagcgctcgaacaagaagaacagaaaga
gagggatctggcatcaccagtcccacgctgaaacggtcgtttgaggtggaggagacagat
acatccacacacccctcgcccctgtcccgtcggaccaccaaccctctccgttcatccacc
tcctccacatccagccagcggagctacgacctgagctcccgcaactctgactactcctct
tccagatcttccccctctgagtcctccaatccacgctccccaaagaccggcatgaggcgc
attgaattatccgggggtcgtaaccctgacatagcctcgtcccgccgcacggagatctcc
attgaggtctcctccaagcaaattgacaactcacccagcgctggcatcgcccgctttggc
ctcaaacgacctgaggtcagcctgagcagtcggagcacccccctggacagctcctccaac
tccatctccagctccacaaacaggcgggcagagcttagcatgacacggtcccatgagccc
cctgcccctcctaggaggatggatgcccagctgtcctctgccccagtctctaggatccct
gagcccccccagagaagagcagagcccccgtctcctatcctgagcccagcagagggggcc
tccaggaggccagagatgcctgtcttcagacagccggacggtttggtgccaggcagtgca
atggagaacaacaaccacccgccacctgcacctagtgctcccctgccttcactctcagag
ccccgggtggagagggtgcagtcacctgtcatggaggcgcccacagcccgaccaacagac
aggccagaggtgatttccagctacagcggcagtgccatgtctgaggcggcagtgcccgat
gccatggtgtccacagcagtgggcggtctgtacggggagaaggccagtggccccaccgtg
gacttcagttacgtgggtattgatgccattctggagcagatgaggaggaaggccatgaag
cagggtttcgagctcaacataatggttgtgggacagagtggcctgggaaagtctactctg
atgaacacactgttcaagtctaaagtcagccgtaagtcagtgctggctacaagccaagag
aagatccccaaaacaatcgaaatcaagtctatcagtcatgacatcgaggagaaaggagtg
agaatgaagctgacagtcattgacacaccaggctttggagaccagatcaacaatgagaac
tgctggcagcccatcatgaagttcattaatgaccagtacgaagcatacctgcaggaggag
atcaacatcaacaggaagaaaagaatcccagactccagagttcactgctgcatatacttt
atccccccgacgggacactgtctgcggcctcttgatgtagaattcatgagacgtctcagt
aaagtggtcaacatcgtcccagttattgccaaagcggatacactcaccctggaggagagg
gacttcttcaaaaagaagatcagggaagagctgcgagccaacgggattgacgtgtaccct
cagaaggagtttgacgaggatgcagaggacagaatgattaacgagaagattagggagatg
atcccatttgccgtggtgggcagtgaccaggagtaccaggtcaatggcaggaggctgctg
gggaggaagaccaagtggggaaccattgaagttgagaacatagcccactgtgagtttgcc
tatttaagggatctcctcatcaggacccatatgcagaacattaaggacatcaccagcagc
atccactatgaaatgtaccgcgtgcggcgcctcaatgagaataacacagtggtggctcat
gccaatggaatcccagagcatcatcttgccgcccacgagatgtag
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