Lates calcarifer (barramundi perch): 108880302
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Entry
108880302 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein unc-13 homolog B
KO
K15293
protein unc-13 A/B/C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108880302
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108880302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108880302
NCBI-ProteinID:
XP_050928777
UniProt:
A0AAJ8BA72
LinkDB
All DBs
Position
LG9:5585281..5645635
Genome browser
AA seq
1577 aa
AA seq
DB search
MSLLCVRVKKAKLQGPPDKFNTYVTLKVQNVKSTTITVRGDQPCWEQDFMFEINRLDLGL
IVEVWNKGLIWDTMVGTAWIPLKSVRQSEEEGSGEWIFLDAEVLMKADEIYGTKNPTPHR
VLLDTRFELPFDIPDDEAQYWTGKLERINTMRIHDEYPLQDDVQSRPLPFAASQCSLDDQ
DSAVDDRDSDYRSETSNSLPPRYHTTAQPNSSMHQYPMGPRLQHHPDSCTDSVHSFDLDY
RDQRGSSPVESSRFGSSGNLSQTSSQLSETGQESTGGSELEESFHSYHSTGFHPSNNGQP
RTNGHLPTNGHSTVGEQEIHRLSPEVGRGLKNDTPAERGSSKLQRFHDDGPPLPFTPSRV
RWLKAINKVRVQLREVHDEEPNVRQAWVKPGGGSGLYGIDSMPDLRKKKPIPLVSDVSLV
QARKAGIASAMAARSSIKDEELKNHVYKKTLQALIYPISCTTPHNFEVWTATTPTYCYEC
EGLLWGIARQGMRCSECGVKCHEKCQELLNADCLQRAAEKSSKHGAEDRTQNIIMAMKDR
MKIRERNKPEIFELIREVFVISKAIHAQQMKTIKQSVLDGTSKWSAKITITVVCAQGLQA
KDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEEKFHFECHNSSDRIKVRVWDEDDDIK
SRVKQRLKRESDDFLGQSIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLQINVEIKGEE
KVAPYHVQYTCLHENLFHHSTDVLGQGVVKIPEARGDDGWKVYFDDVAQEIVDEFAMRYG
IESIYQAMTHFACLSSKYMCPGVPAVMSTLLANINAFYAHTTASTNVSASDRFAASNFGK
ERFVKLLDQLHNSLRIDLSTYRNHFPASSKDRLQDLKSTVDLLTSITFFRMKVQELQSPP
RASQVVRDCVKACLNSTYDYIFNNCHELYNRQYQPVDTNKEELPLEEQGPSIKNLDFWPK
LIMLIVSIIEEDRNSYTPVLNQFPQELNVGKVSAEVMWTLFAQDMKYAMEEHEKHRLCKS
TDYMNLHFKVKWLYNEYVKELPSVKGVVPDYPSWFLQFVLQWLDENEDVSVEFMHGALER
DKKDGFQQTSEHALFSCSVVDIFTQLNQSFEIIKKLECPDPNVMAQYSRRFSKTIAKVLL
QYSAILTKSFPSYIDKEKIPCVLMNNVQQLRIQLEKMFESMGAKQMDTEASDLLNDLQVK
LNNVLDELSSTFGNSFQSRINDCMQQMASLLYQLKGPLNANNKNQVEADSDNMLRPLMDF
LDGKLTLFATVCEKTVLKRVLKELWRIVMSSLEKTIVLPQGSDTFGAQILSAAKELGQLS
KLKDHMAGEAKSLSPRQCAVMDVALDTIKQYFHAGGNGLKKAFLDKSPELSSLRHALSLY
TQTTDTLIKTFVTTQHAQGSGVDKPIGEVSIQIELYTHPGNGERKVTAKVVGASDLKWQT
SGMFRPFVEITMIGPHLSDRKRKFQTKSKNNSWSPKFNETFHFALGNQDGFECYELQVCV
KDYCFGRADRVVGLAVIQLRDIIEKGNCACWCPLGQRIHMDDTGLTAMRILSQRSNDDVA
KEFVRLKSETRSAEEGR
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttactgtgtgtcagagtgaagaaagccaagctccagggacctccagacaaattc
aacacctacgtaacgctgaaggtgcagaatgtcaaaagcacaactatcactgtgcggggg
gaccagccctgctgggaacaggattttatgtttgagatcaaccggctggaccttggcctc
attgttgaggtgtggaacaaaggcctcatctgggataccatggtggggactgcctggatt
cctcttaagagtgtccgacagtcggaggaggagggctcaggtgagtggattttcctggat
gcagaggttctgatgaaggcggatgagatatatggcaccaagaacccaacaccgcatcga
gtcctgctggatactcgcttcgagctgccttttgacatcccagatgatgaggcacagtac
tggacaggcaagctggagcgcatcaataccatgagaatccatgatgagtaccctcttcag
gatgacgttcagagtcgcccacttccatttgcagcttcccagtgctctctagatgaccag
gacagtgctgtagatgaccgggacagtgactaccgcagtgaaacgagtaatagtctgcct
ccacgttaccacacaacggctcagcccaactcttccatgcaccagtaccccatggggcct
cggctacagcaccacccagactcctgcacagactcagtccacagttttgacctggactac
agagaccagagaggaagcagtccagtggaaagtagtcgttttgggtcatcaggaaacctg
agccagaccagctcccagcttagtgagactggccaggagagcactggagggtcagaactg
gaggagtcattccactcctatcacagtactggctttcacccttccaacaatgggcagcca
cgcacaaatggacatcttcccaccaatggacactctacggttggtgagcaggagatacat
aggctttcccctgaagtaggacggggcctgaaaaatgacaccccagcagaaagagggtcc
tctaaactccaaaggttccacgatgacgggccaccgttaccctttactccatccagagta
cgttggttgaaggccatcaataaagtcagggttcagctccgggaggttcatgatgaagaa
cccaacgtcagacaggcctgggtcaaaccaggtggcggatctggtctgtatggaattgac
agtatgccagacctgcgtaaaaagaagccaatccccttggtcagcgacgtgtcccttgtc
caagccaggaaggcagggattgcatctgctatggctgcacggtcctcaatcaaggatgag
gagctgaaaaaccatgtgtacaagaagaccctgcaggccctcatctaccctatatcttgc
actacgccacataactttgaagtgtggactgccactacacccacatactgctatgagtgt
gagggactgctgtgggggattgcccgccaaggcatgcgttgctctgagtgtggtgtaaag
tgccatgagaagtgccaagagctgctgaatgctgactgtctacaacgtgctgcggagaag
agctctaagcatggagctgaagacaggactcagaatattatcatggccatgaaggacagg
atgaagatccgggagaggaacaaaccagaaatctttgaacttatcagggaagtgtttgtc
atcagcaaagccatccacgcgcagcagatgaagaccatcaagcagagtgtattggatggg
acctcaaagtggtcagcaaagatcaccatcacagtcgtttgtgcccaaggacttcaagcg
aaggacaagacgggatccagtgatccgtatgtcactgttcaggtgggcaagaccaagaag
agaaccaagaccatttatggcaacctcaatcctgtctgggaggagaagttccactttgag
tgccacaattcctcagaccgaattaaagtgcgtgtgtgggatgaagatgacgacatcaag
tcgagggtgaagcagcgtctcaagagggaatctgatgatttccttggccagagtattatt
gaagttcgaacactgagtggagaaatggacgtctggtacaacctggagaagaggacggac
aagtcagccgtgtcaggtgccattcgcctccaaatcaacgtggagatcaagggagaggag
aaagtggcgccatatcatgtgcagtacacatgtttacatgagaacctgttccaccattcg
actgatgtgcttggccaaggtgtagtgaaaatcccagaggctcgtggagatgatgggtgg
aaagtctactttgacgatgtggcacaagaaatagtagatgagtttgccatgcgctacggg
attgagtcaatctatcaggccatgacgcactttgcctgtctgtcatctaagtacatgtgt
cctggagttcctgcagtgatgagcaccctgctggccaatatcaatgccttctacgcccac
acaactgcctccaccaacgtgtccgcctccgaccgcttcgctgcctccaattttgggaaa
gaacgctttgtcaagctcttagaccagttacacaactccttgcgcattgacctctcaact
tacaggaaccacttccctgccagcagcaaagaccgcctgcaggatttgaaatccactgtg
gatcttctaaccagcatcactttcttcaggatgaaggtccaggagttacagtctccaccc
agagccagccaggttgtgagggactgtgtcaaggcctgtctcaattctacatacgactac
atcttcaataactgccatgagctgtacaacagacagtaccaacctgtggacacaaacaag
gaggagctccctctggaagagcagggtccaagcatcaagaacttggacttctggcccaaa
ctcatcatgctcattgtttcaatcattgaagaggatagaaactcctacacacctgtgctc
aaccagttccctcaagaactgaatgtagggaaggtgtcagcagaggtcatgtggacattg
tttgctcaagacatgaagtatgctatggaagaacatgagaagcacagactgtgtaagagc
acagactacatgaaccttcactttaaggtcaagtggctctacaatgaatatgtcaaggag
ctgccaagtgtcaagggtgttgttcccgactacccatcatggttcctccaatttgtgctg
cagtggttggatgaaaatgaggatgtatctgttgagtttatgcatggagccctggaaagg
gacaaaaaagatggattccagcagacatctgagcatgctctattctcctgctctgtggtg
gacatcttcacccagctcaaccagagttttgagatcatcaagaaactggaatgtcctgac
cctaacgtcatggctcagtacagtcgccgcttctccaagacaattgccaaagttcttctg
cagtacagcgccattctgaccaagagttttccttcttatattgacaaggagaagattccg
tgcgttctgatgaacaatgtgcagcagttaagaatccagctggagaagatgtttgagtcg
atgggtgccaaacagatggatactgaggccagcgacttactgaacgacctgcaggtgaag
ctgaacaacgtactggacgagctcagcagtacattcgggaacagcttccagagccgcatc
aatgattgcatgcaacagatggcgtctctgctgtaccagctcaaaggaccactcaacgcc
aataacaaaaaccaagtggaggccgactccgataatatgctaaggccactcatggatttc
ctggatggaaagctgacactgtttgccactgtatgtgagaagactgtactgaagcgtgtg
ctcaaggagctttggaggattgtaatgagcagcctggagaagactattgtcctgccgcag
ggcagcgatacctttggagcacagatcctctcagctgcaaaagaacttggtcagctctcc
aaactcaaggatcacatggcaggggaggctaaaagcctgtctcccaggcagtgtgctgtc
atggatgtggcactggacactattaagcaatactttcacgcaggaggcaatgggctgaag
aaggcattcctggataaaagtcctgagctgtcctccttacgccatgctctgtccctctac
actcagacaacagacacactcatcaagacctttgtcaccacccagcatgcacaaggctca
ggtgtggacaagccaataggtgaggtgtcgatccagattgagctgtacactcatcctggg
aatggggagcgcaaagttactgccaaagtcgtgggagccagtgacttaaaatggcagaca
tctggcatgttccgaccctttgtggagatcaccatgattggtcctcaccttagcgacaga
aaacgcaaattccagaccaaatccaaaaacaacagctggtctcccaagtttaatgagacc
ttccactttgctctgggtaaccaggatggctttgagtgctacgagctgcaagtctgcgtc
aaagactactgttttggccgcgctgaccgagtggtgggcttggctgtgatacaattaaga
gacatcatagagaagggcaactgcgcctgctggtgcccactgggacagcgcatccacatg
gacgacaccggcctcactgccatgcgaatcctctcccagcgctccaacgacgacgtggcc
aaggagtttgtgaggctgaaatcagaaactcgatcggctgaggagggcagatga
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integrated database retrieval system
