Lates calcarifer (barramundi perch): 108880393
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Entry
108880393 CDS
T04895
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108880393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108880393
03036 Chromosome and associated proteins [BR:
lcf03036
]
108880393
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108880393
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108880393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
108880393
NCBI-ProteinID:
XP_050932714
UniProt:
A0AAJ8DVT5
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All DBs
Position
LG16_LG22:8907465..8919540
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AA seq
1218 aa
AA seq
DB search
MADQVAAMCDQLIKAVNVMMDAETSQIYRLEALKFCEEFKETNSLCVPCGLQLADKAQPA
VIRHFGLQILEHVIKFQWNNMQQQEKVQLKECAMQLLSNGTHSILEEESHIKDVLSRITV
EMIKREWPQHWPDMLKEMEALTGQGEAQTELVMLILLRLAEDVITFQTLPTQRRRDIQQT
LTQNMESIFSFMMAILQLNVEDYRKLKESPGHELQARAHCRVAVATLNTLAGYIDWVSLV
HITSGNCHLLEILCLLLSEPELQLEAAECLLIAISRKGKLEDRKPFMLLFDDVAIHYILS
AAQSADGLAICKKSSESQAVEVVERRYIFLKRLCQVLCALGGQLCSLVGSDVEVEVPANL
SKYTEALLAFTTHSSQFLKSSTLATWGALFRHETLSKDAVVVEMAVKYLRACMTNLVKAG
FPSRDDNPSCEYSRVDFDSDEDFNSFFNSFRAQQGEVVRSACRIVPLEAFQIAAEWLQYQ
IASPIDIGDTTSKTAEGLCSLLSPSVVQWDAVTVFMECMVAHIFKSLEEEKLPIDQSMEL
LQAVLNYETKDPLILSCVLTNVSALFPFVIHRPHFLTQVLYKLFKAITFDIGQDNKVPRT
RAVKNVRRHACSSIIKICRDYPQFILPCFDMFYNHVKKLFSSDTTLTHMEKCSLMEALVL
ISNHFKDFAKQKAFLDELMASVVAEWTSDEMRHVLWDPALFLSFVGADQVVTEQSTEKDT
AGLNRGRLSFCLYAMLGVVKRARWPADLEEAKAGGFVVGYTPAGAPIYRNPCTAQFLVLL
PNLLALIRTHNSLFVPENMARLSETFSRAHEVMDAEKNVVLGLPQHLLDIYDSPVYRTNL
ERMQGFFTTLYDNCFHVLGNAGLSLQQEFYTIERLAEEIAGSAFVSLDHVPDHRLRPMIR
VFLRQLVLSCPQEYYDSLLCPLLGPLFTYMQQRLNVKWQVINQRTSINGEDQEEVVCQES
QVTQEMLEEQLVRLLTREVLDLLAVSCIARKVPEPAANKEEVDEEDMMMDSVQTVSPAQP
TDELTELGKCLMKHENIYMSLLTLSFTSLSWKDTSNCHRTASMVCWTLLRQVVGGNLLPE
AVTWFYTSVLRGLQVHGQHEVCNSTLSQLAMLIYENLRPRYMELRAVMTQIPNISVEGLD
QYDRRLMDPNAQKVGDKKRKDQFKKLIAGTVGKALCQQFRKEVHIRNLPSLFKKPKSDKD
LQNSGEPLGLAALFVPGE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaggtggccgccatgtgtgatcagcttattaaagctgtgaatgtgatgatg
gatgccgaaacaagccaaatttaccgactggaggccctaaagttttgtgaagagtttaaa
gagacaaactccctctgtgttccatgtggcttacaattagccgacaaagcccaacctgct
gtaataagacactttggtttgcaaatcctggagcacgtcatcaaatttcaatggaacaat
atgcaacaacaagagaaagtccagttgaaggagtgtgccatgcagctgctatcaaatggt
actcattctatcctggaggaggagagccatatcaaagatgtcctgtcacgaatcacagtg
gaaatgataaagagagaatggccgcagcactggccagatatgctgaaagagatggaggct
ctcactggccaaggggaggcacagacagagctggtgatgttgatcctgttgaggctggcg
gaggatgttatcaccttccagacgctgcccacccagcgacgcagagacatccagcagacg
ctcacccaaaacatggagagcatcttcagtttcatgatggcaattttgcagctcaatgtc
gaggactaccgtaagctgaaagagtcacctggacatgaactgcaggccagagctcactgt
cgtgtcgctgtggccacactgaatacgcttgcaggctacatagattgggtgtctctggtg
cacatcacctccggaaactgccatctactggagatattatgtctgctgctgagtgagcca
gagctgcagctggaggcagcagagtgtctgctcatagctatcagccggaagggcaagctg
gaggataggaagccgttcatgctgctgtttgatgatgtggccatccactacatcctttct
gcagcccagtctgcagatggactggcaatatgtaagaaatcctctgaatcgcaagcagtg
gaggtggtggagcgacgttacatcttcctgaagaggctgtgtcaggtcctgtgtgctctg
ggaggccagctctgctcattagtgggttcagatgtggaggttgaagtacctgcaaatctc
agcaagtacacggaagcccttttagccttcactacacattccagtcagttcttgaagtcg
tccactctggctacttggggagctttgttcagacatgagactctgtcaaaggatgcggtt
gttgtggaaatggctgtcaaatacctcagagcgtgtatgaccaacctggtcaaggctgga
tttccatctagagacgataacccaagctgtgagtactctcgtgtggactttgacagcgac
gaggacttcaactcattcttcaattcttttcgagcgcagcagggagaggtggtgaggagt
gcatgtcgcattgttcctctggaggcctttcagatagcagcagaatggttacagtatcag
attgctagccctattgacatcggggataccacgtctaagactgcagagggcctgtgctcc
ctcctgtcaccatctgtggtccagtgggatgcagtgaccgtcttcatggagtgcatggtc
gcacacatcttcaaaagtctggaggaggagaagctgcccatagatcaaagcatggagctg
ctgcaggctgtgctgaactacgagaccaaagacccgctcatcttgtcctgtgtcctcacc
aacgtctctgccctcttcccatttgtcatacaccgaccacacttcctgacacaggtccta
tacaagctgtttaaagccatcacatttgacattggtcaagacaataaggtacctcggacc
agagctgtaaagaacgtgaggaggcacgcctgttcttctatcatcaaaatttgccgggac
tacccacagttcatcttgccttgtttcgacatgttttacaatcacgttaaaaagctgttc
tcgagcgacaccacactgactcacatggagaaatgttccctgatggaggctttggtgctg
atcagtaaccacttcaaggactttgcaaagcagaaggcttttctagatgaactgatggca
tcagtggttgcagaatggacctcggatgagatgaggcatgtgctgtgggatcctgcactg
ttcctgtcctttgttggagctgatcaggtggtcactgagcaaagtacagagaaagacaca
gcaggacttaatagggggcggttgagtttctgtttgtacgccatgctgggggtggtgaaa
cgggcacggtggcctgcagacttggaggaagccaaggctggtggctttgtggtgggctac
acccccgccggagctcccatctacaggaacccctgcactgcccagtttctggtcttgctg
cccaacctgttggctctcatcaggactcacaacagtctgttcgtgccagagaacatggct
cgtctgagtgagaccttttccagggcccatgaggtgatggatgcagagaaaaatgtggtt
cttggtctccctcagcatcttctggatatttatgactcgcctgtatatagaaccaacctg
gagcgcatgcagggatttttcaccacattgtatgacaactgcttccatgttctgggaaat
gcaggtctgtccttgcagcaggagttctacaccattgagaggttggctgaggaaatagcg
ggctctgcttttgtctcccttgaccatgtgcctgaccacagacttcgccctatgattcgg
gtgtttctgaggcagctggtgctatcatgtcctcaggagtactacgacagtctactctgc
cccctgctgggccctctattcacctacatgcagcagagactcaatgtcaagtggcaggtc
atcaaccagaggacctctattaacggtgaggatcaggaggaggtggtgtgccaggagagc
caggtgacgcaggagatgttggaggagcagctggtgcgcctgctcaccagggaggtgctg
gatcttctcgctgtgagctgtattgccagaaaagtgcctgaaccggccgcaaataaggag
gaggtagacgaggaagacatgatgatggattcagtgcagacggtgtctcccgcccagccc
acagacgagctgactgagctggggaagtgcctgatgaaacacgagaacatctacatgtcc
ctattgaccctctccttcacctcgctgtcatggaaggacacctcaaactgtcaccgcact
gcttccatggtctgctggacccttctgcggcaggtcgtagggggtaatcttcttcctgag
gcggtcacgtggttctacaccagtgttctcaggggccttcaggttcatgggcagcatgaa
gtatgcaactctaccctctctcagctggccatgctcatctatgaaaacctgcgccctcgc
tacatggagctgagagcagtaatgacccagatcccaaacatcagtgtggagggtctggac
cagtatgatcgcaggctcatggaccccaatgcccagaaggttggagacaagaagaggaaa
gaccagttcaagaagcttattgcaggaacagttgggaaagctctgtgccagcagttcagg
aaggaggttcatatccggaatcttccatcgctctttaaaaagccgaagtcagacaaggat
ttacagaacagtggtgaaccattgggcctggcagctctcttcgtccccggtgaataa
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integrated database retrieval system
