Lates calcarifer (barramundi perch): 108880418
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Entry
108880418 CDS
T04895
Symbol
desma
Name
(RefSeq) desmin a
KO
K07610
desmin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108880418 (desma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108880418 (desma)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
108880418 (desma)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
KASH_CCD
ABATE
CCDC92
DUF4407
Baculo_PEP_C
DUF2935
Sec10_N
DUF4515
GAS
Motif
Other DBs
NCBI-GeneID:
108880418
NCBI-ProteinID:
XP_018527428
UniProt:
A0AAJ7LPB9
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Position
LG1:14631761..14639166
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AA seq
475 aa
AA seq
DB search
MSKSYTSSSQTASSYRRTFGSGVGSSPMSSLFSSVGGGRGSSSSHMSSRVYEVKSTGIPS
YSSFRVSSGAGGAGFGSSTAMRTYAGEKLDFNLADAMNQDFLNTRTNEKAELQHLNDRFA
SYIEKVRFLEQQNAALTVEIEKLRGREGPGRVAEMYEEEMRELRRQIEALSNQRARVEVE
RDNLADDLQKLKLRLQEEIHQKEEAENNLSAFRADVDNATLARLDLERRIESLQEEIAFL
KKIHEEEIRELQSQMQDTQIQIQMDMSKPDLTAALRDIRMQYEAIAAKNISEAEDWYKSK
VSDLNQAVNKNNDALRQAKQESMEYRHQIQSYTCEIDSLKGTNESLLRQMRDMEDRMSRE
ASGFQDTIARLEEDIAKMKDDMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITMP
VQSAYSSIGFRETSPESQPQRSSEVHSKKTVLIKTIETRDGEVVSESTQHQQDIM
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcctacacttcctcatcccagaccgcctcctcgtaccgccgcacctttggc
tccggggtcggttcatccccgatgtcctccctcttctcctcagtgggaggaggccgtggc
tcctcttcaagccacatgtcttccagagtctacgaggtcaagagcactggcattccctcc
tattccagcttcagggtgtcctccggtgctggaggagctgggttcggctcctccacagcc
atgcgcacctacgccggcgagaaactcgacttcaacctggccgacgccatgaaccaggac
ttcctcaacacaaggaccaacgagaaggccgagcttcagcacctcaatgaccgctttgcc
agctacatcgagaaggtgcgcttcctggagcagcagaacgcagcgctgacggtggagatc
gaaaagctgaggggtcgcgaggggcctgggcgcgtggctgagatgtatgaggaggaaatg
agggagctgaggaggcagatagaggccctgtccaaccagcgtgcccgagtggaggtggag
agagacaacctggctgatgacctgcagaaactcaagctaagactgcaggaggagattcac
cagaaggaagaggctgagaacaacctgtctgctttcagagccgatgttgacaatgccact
ctggccaggctggacctggagagacgaattgagagtctgcaagaggagattgctttcctc
aagaagatccatgaggaggagatccgtgagctgcagagccagatgcaggacactcagatc
cagatccagatggacatgtccaaacccgacctgactgctgctctgagggacatccgcatg
cagtacgaggccattgccgccaagaacatctcagaggctgaagattggtacaagtctaag
gtgtctgatctgaaccaggctgtgaataagaacaacgatgcactccgccaggccaaacag
gagagcatggagtacagacaccagatccagtcctacacctgtgagatcgactcactcaaa
ggcaccaatgagtctctgctgcgccagatgagagatatggaggatcgtatgtcccgcgag
gcctctggtttccaggatactatcgcacggctggaggaagacattgctaagatgaaggat
gacatggcccgtcacctgagagagtaccaggacctgctcaatgtgaagatggcccttgat
attgaaattgccacttaccgcaagctgctggaaggagaggagagcaggatcactatgcct
gtccagtctgcttattcctccattggattcagagagaccagtcctgagtcccagccccag
cgctcatcagaggttcactctaagaagactgttctcatcaagaccatcgaaacccgtgat
ggagaggtggtcagcgagtccacacagcaccagcaagacatcatgtaa
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