Lates calcarifer (barramundi perch): 108880432
Help
Entry
108880432 CDS
T04895
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108880432
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108880432
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108880432
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108880432
Peptidases and inhibitors [BR:
lcf01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
108880432
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Others
108880432
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Others
108880432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108880432
NCBI-ProteinID:
XP_018527456
UniProt:
A0A4W6FH94
LinkDB
All DBs
Position
LG1:15245267..15261066
Genome browser
AA seq
748 aa
AA seq
DB search
MGEHTAFLLLLLATLTLSSEVPADDSVGLLTEPQVAMFCGKLNMHINVQTGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWSKKGRKQFRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPVEADQESDSTELEGEESDVWWGGAETEYSDNSMSRPADTEPATAEGDEDED
EQAEAFERDENGDGDEGEDDDVTDERDSDERSANIAMTTTTTTTTESVEEVVRAVCWARA
ESGPCHAMLERWYFVPEKGRCAPFLFGGCGGNRNNFESEEYCLAVCSSSLPTMAPSPPDA
VDRYLESPGDDNEHADFQKAKESLEAKHREKMSQVMREWEEAERQAKNLPRADKKAVIQH
FQEKVEALEQEAAGERQQLVETHMARVEALLNSRRRLALENYLSALQANPPRPRQVLGLL
KKYVRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQVLTHLRVIDERMNQSLGLLYKVPSV
ANEIQNQVALIVQRVQSELSQQVSSLQSDGRVDGRVSYGNDALMPDQAYSSAPMDPGLDG
LGFIHPESFNQPNTENHVEPVDARPIPDRGLPTRPVSALKPEEMPEVRMETEERQNAGYE
VYHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVDAAV
TPEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcacacggcgtttctgctgttactgttggcgaccttgacgctttcatccgag
gtgcccgctgatgactctgtgggtttactaactgaaccccaggttgccatgttctgtggg
aagctcaatatgcacatcaatgtgcagactggcaaatgggagtctgatccttctggcact
aagagctgcatcggcaccaaggagggcatcctgcagtactgccaagaggtgtacccagag
ttgcagatcacaaatgttgtggaagccaaccagcctgtcagcatccagaactggagcaag
aaaggccgcaagcagttccgcagtcacacacacattgtggtgccataccgctgcctggtt
ggggagtttgtgagcgatgccctgcttgttcctgacaagtgtaagttcctgcaccaggag
cgtatggaccagtgtgagagccacctgcactggcacactgtagccaaagagtcctgcgga
gaccgcaccatgaatctccatgactacgggatgctgttgccatgtggaatcgaccgtttc
cgaggagtggagtttgtctgctgtccagtggaggcagatcaagagtcagacagcacagag
ctagagggagaggagtcagacgtctggtggggcggagctgagaccgaatactctgataac
agcatgtcacgtccggcagacacggagcctgccaccgcagaaggtgatgaagatgaggat
gaacaggcagaagcttttgaaagggatgagaacggagatggtgatgaaggtgaagatgat
gacgtgactgatgaacgggatagcgatgagcgcagtgctaacattgctatgacgaccact
accaccactaccaccgaatcagttgaagaagttgttcgagctgtgtgctgggcccgtgct
gagtcaggcccgtgtcatgccatgctggagcgctggtacttcgtgcctgagaagggccgc
tgtgctcccttcttgtttgggggctgtgggggcaacaggaataactttgaatcggaggag
tactgcctggctgtctgcagcagctcgttgcccaccatggcccccagtcctccagacgct
gtggatcgttaccttgaatctccaggtgacgacaacgaacacgctgacttccagaaggcc
aaggaaagcctagaggccaaacaccgtgaaaagatgtcccaggtgatgagggagtgggag
gaggctgagagacaggccaagaaccttcctcgcgctgacaagaaagctgtcatccagcac
ttccaggagaaggtggaggctcttgagcaggaagcagcaggagagaggcagcagctggtg
gaaactcacatggcgcgggtggaagctctgctcaacagccgccgtcgccttgctctggaa
aattatctcagcgcccttcaggccaaccctccacggccccgtcaggtgttgggtctgctg
aagaagtacgtccgtgcagagcagaaggacaggcagcacacactgaaacattacgagcac
gtccgcacagtcgacccaaagaaggctgcacagatccgaccccaggttttgacccatcta
cgtgtgatagatgagaggatgaatcagtcactgggtctgctctacaaagttcccagtgtt
gcaaatgagattcagaaccaagttgcacttatagtgcagagagttcagtcggagctgtct
cagcaagtctcttccctgcagagcgacgggcgggtggatggcagggtgagttacggtaac
gatgctctgatgcctgatcaggcctacagctctgctcctatggaccctggcctggacgga
ctcggcttcatccaccctgagagctttaaccaacccaacacagagaaccacgttgagcct
gttgatgctcgtccaattccagatagaggactgcccacaagacctgtgtctgccctgaag
ccagaggagatgccagaagtgcggatggagactgaagagaggcaaaatgctggttatgaa
gtttaccatcaaaaactggtatttttcgctgaagatgtggggtccaataaaggtgccatt
attggacttatggttggaggggttgtcatagcaactgttattgtcatcaccttagtgatg
ctgaggaagaaacagtatacttctattcatcatggtgtaatcgaggtggatgcagcagtg
acaccagaggagcgtcacctggccaagatgcagcagaacggttacgagaaccccacctac
aaattcttcgagcagatgcagaactaa
DBGET
integrated database retrieval system
