Lates calcarifer (barramundi perch): 108880434
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Entry
108880434 CDS
T04895
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108880434
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
108880434
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
108880434
NCBI-ProteinID:
XP_018527461
UniProt:
A0A4W6FEX6
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Position
LG1:complement(15261163..15269765)
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AA seq
441 aa
AA seq
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MSKSEPDEMIEIEIDEREKQACLEEGVEEQTITASDLIQQDIDINEPIGNLKKLLEPRIQ
ISLDPYEICLQDIQLHPDHSLFDQGVKTDGTVQLSLQIITKPGEEKLNILEIVKPVETVE
VVIDPDAAGEEGALVEEGQLIAVERSGLTDETSEQVTRWAAALEGYRKEQVRLGIPYDPL
LWTADQVIHWAVWVMKEFNIDEMEIGSIHIPGRELCSFSQEEFLQKVPNGEILWSHLELL
RKYVLASQDQSGGDATVTIDQPVQIIPAQVSTPTAIKVLKQSRGPRTPRISGGEERSSPG
NRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMNY
EKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNNLVTECEQKKLARMQM
HGIGQPITTVTLATTTLDKDS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagtgaaccagacgagatgatagagattgagattgatgaacgggagaaacag
gcatgcctggaggaaggtgttgaagagcagacgatcactgcatctgatttgattcagcaa
gacattgacatcaatgagcccattggcaatttgaagaagcttttggagcctcgtatccaa
atatcactggatccctatgagatctgcttgcaggacattcagcttcacccagatcacagc
ctcttcgatcagggagtaaagacagacggcacagtgcagctcagcctgcagattataacc
aaaccaggtgaagagaagctgaacattttggaaattgtgaaaccggtcgaaacagtggag
gtggtgattgatccggatgcagcaggggaggagggtgccctggtggaggagggtcagctc
attgctgtggagaggtctggcctcacagatgagacatcagaacaggttacacgctgggct
gcagcacttgaaggctaccgcaaagagcaggtccgcctgggcataccatatgaccccttg
ctttggacagctgaccaggtgatccactgggccgtgtgggtgatgaaggagtttaacatc
gatgagatggaaataggcagcattcacatcccaggccgagaactctgcagtttcagccag
gaggagttccttcagaaagtgcccaatggagagatactttggagtcacctggaactccta
cgcaaatatgtgttggccagccaggatcagtctggaggtgatgccacagtcactattgat
caacctgtgcagataatcccagctcaggtgagcacacccaccgccataaaggtactgaag
cagagccgtggccccagaacgccgcgcatttcaggaggagaggagcgcagctcacctggc
aaccgcacaggtaacaatggtcagatccagctctggcagttcttgttggagctgctgaca
gacaaggatgcaagagactgcatctcctgggtgggcgaggaaggagagttcaaactcaac
cagcctgaacttgtggctcagaaatggggccagcgcaagaacaagcctaccatgaactac
gaaaaactcagcagagccctcaggtattactatgacggggacatgatcagcaaggtgcag
ggcaagcgctttgtctacaagtttgtgtgcgacctgaggactctgattggctacagcgct
gctgagctcaacaacctggtgaccgagtgcgaacagaagaaactggctcgtatgcagatg
catggcattggtcagcccatcactacagtgaccttggccaccacgacactagacaaggac
agttga
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