KEGG   Lates calcarifer (barramundi perch): 108880440
Entry
108880440         CDS       T04895                                 
Symbol
snx4
Name
(RefSeq) sorting nexin-4
  KO
K17919  sorting nexin-4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108880440 (snx4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108880440 (snx4)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcf04990]
    108880440 (snx4)
Membrane trafficking [BR:lcf04131]
 SNARE
  SNARE associated proteins
   Others
    108880440 (snx4)
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    108880440 (snx4)
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    108880440 (snx4)
Domain-containing proteins not elsewhere classified [BR:lcf04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   108880440 (snx4)
SSDB
Motif
Pfam: PX Vps5 BEX GrpE
Other DBs
NCBI-GeneID: 108880440
NCBI-ProteinID: XP_018527476
UniProt: A0A4W6EZE3
LinkDB
Position
LG1:14716929..14725559
AA seq 437 aa
MMADSGSSEEVAVIGNIDLTSSESENNIINTMVERGTALLRKMEINVAEAEKRTGKNTVN
MQETYTVYLIETRPAETVPDGGTPAAPDTLWRRYSEFELLRTYLLVTYPYIIIPPLPEKR
AEFVWHKLSADNLDPDFVERRRVGLENFLLRVASHPVLSNDEIFFRFLTEEKGWREAVLE
TGFQDKADSRLKSLSAMFRVKNPDKRFTALKHYSDELNTVISQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTYASSIDDILEEEEHYADQLKEYLFYTDA
VRSVCRKHELIQYELEMAAQDLAHKKQQKEELATGTVRVFSLKGMTSKLFGQESQEQRES
RLAALEQSIQEGEEAVKEKNAECQEFVRTAWEDIERFKEQKDRDLREALISYAIMQISMC
KKGIQVWSNAKECFNKM
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgatggcagactctggaagcagcgaagaagtagctgtgatcggcaacatcgacctcact
tcatcggaatcagagaacaacattataaacacgatggtggaaagagggacagctctgttg
agaaaaatggaaataaatgtggcagaggcagagaagagaacagggaagaacacagttaac
atgcaggaaacctatactgtctacctcatagaaacacggccagctgaaactgtcccagac
ggaggtacgccagctgcacctgacactttgtggagacgctacagtgaatttgagttgctc
agaacgtacctcttggtcacctacccctacatcatcatccctccactaccagagaaaagg
gcagagtttgtgtggcacaagctatcagcagacaacctcgacccagactttgttgaacga
aggagagtcggcctggaaaactttctgttgcgtgttgcatcacatccagtcctttcgaat
gacgaaatcttcttccgctttctcacagaggagaagggatggagggaggcagttttggag
acaggtttccaagacaaggctgactccagactaaaatctctgagtgccatgttcagagtt
aagaaccctgacaagcgattcacagctctgaaacactacagtgatgagctgaatactgtc
atctctcagttactcagggtgcgggcgagagtagcagacaggttgtatggagtttacaag
gtccacggtaactacggcagagtctttagtgagtggagtgctatagaaaaagagatggga
gatggactacagagtgctggccaccacatggacacgtatgcttcatcaatagacgacatt
ctggaggaagaagagcactatgcagatcaactgaaagaatacctcttctacactgatgct
gtcaggtcagtatgtaggaaacatgagttgatccagtatgagctggagatggcagctcag
gacctcgcccataagaagcaacagaaagaagaactggccactgggacagtgcgagtcttt
tctctgaaggggatgaccagtaaactatttggccaggagagccaggagcagagggagagc
aggttggcagccctggagcagagtatacaggagggagaggaggcagtcaaggagaagaac
gcggagtgccaagagtttgtgagaacagcctgggaagacattgaacgtttcaaggagcag
aaggacagagatctgcgtgaggcattaatcagctatgccattatgcagatcagcatgtgt
aagaagggaatccaggtgtggtccaatgcaaaggagtgtttcaacaaaatgtga

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