Lates calcarifer (barramundi perch): 108880440
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Entry
108880440 CDS
T04895
Symbol
snx4
Name
(RefSeq) sorting nexin-4
KO
K17919
sorting nexin-4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108880440 (snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108880440 (snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108880440 (snx4)
Membrane trafficking [BR:
lcf04131
]
SNARE
SNARE associated proteins
Others
108880440 (snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
108880440 (snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
108880440 (snx4)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108880440 (snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BEX
GrpE
Motif
Other DBs
NCBI-GeneID:
108880440
NCBI-ProteinID:
XP_018527476
UniProt:
A0A4W6EZE3
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Position
LG1:14716929..14725559
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AA seq
437 aa
AA seq
DB search
MMADSGSSEEVAVIGNIDLTSSESENNIINTMVERGTALLRKMEINVAEAEKRTGKNTVN
MQETYTVYLIETRPAETVPDGGTPAAPDTLWRRYSEFELLRTYLLVTYPYIIIPPLPEKR
AEFVWHKLSADNLDPDFVERRRVGLENFLLRVASHPVLSNDEIFFRFLTEEKGWREAVLE
TGFQDKADSRLKSLSAMFRVKNPDKRFTALKHYSDELNTVISQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTYASSIDDILEEEEHYADQLKEYLFYTDA
VRSVCRKHELIQYELEMAAQDLAHKKQQKEELATGTVRVFSLKGMTSKLFGQESQEQRES
RLAALEQSIQEGEEAVKEKNAECQEFVRTAWEDIERFKEQKDRDLREALISYAIMQISMC
KKGIQVWSNAKECFNKM
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactctggaagcagcgaagaagtagctgtgatcggcaacatcgacctcact
tcatcggaatcagagaacaacattataaacacgatggtggaaagagggacagctctgttg
agaaaaatggaaataaatgtggcagaggcagagaagagaacagggaagaacacagttaac
atgcaggaaacctatactgtctacctcatagaaacacggccagctgaaactgtcccagac
ggaggtacgccagctgcacctgacactttgtggagacgctacagtgaatttgagttgctc
agaacgtacctcttggtcacctacccctacatcatcatccctccactaccagagaaaagg
gcagagtttgtgtggcacaagctatcagcagacaacctcgacccagactttgttgaacga
aggagagtcggcctggaaaactttctgttgcgtgttgcatcacatccagtcctttcgaat
gacgaaatcttcttccgctttctcacagaggagaagggatggagggaggcagttttggag
acaggtttccaagacaaggctgactccagactaaaatctctgagtgccatgttcagagtt
aagaaccctgacaagcgattcacagctctgaaacactacagtgatgagctgaatactgtc
atctctcagttactcagggtgcgggcgagagtagcagacaggttgtatggagtttacaag
gtccacggtaactacggcagagtctttagtgagtggagtgctatagaaaaagagatggga
gatggactacagagtgctggccaccacatggacacgtatgcttcatcaatagacgacatt
ctggaggaagaagagcactatgcagatcaactgaaagaatacctcttctacactgatgct
gtcaggtcagtatgtaggaaacatgagttgatccagtatgagctggagatggcagctcag
gacctcgcccataagaagcaacagaaagaagaactggccactgggacagtgcgagtcttt
tctctgaaggggatgaccagtaaactatttggccaggagagccaggagcagagggagagc
aggttggcagccctggagcagagtatacaggagggagaggaggcagtcaaggagaagaac
gcggagtgccaagagtttgtgagaacagcctgggaagacattgaacgtttcaaggagcag
aaggacagagatctgcgtgaggcattaatcagctatgccattatgcagatcagcatgtgt
aagaagggaatccaggtgtggtccaatgcaaaggagtgtttcaacaaaatgtga
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integrated database retrieval system