Lates calcarifer (barramundi perch): 108880445
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Entry
108880445 CDS
T04895
Name
(RefSeq) synaptotagmin-like protein 5 isoform X1
KO
K17598
synaptotagmin-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108880445
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108880445
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108880445
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
108880445
Small GTPases and associated proteins
Rab associated proteins
108880445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
108880445
NCBI-ProteinID:
XP_018527482
UniProt:
A0A4W6FGA0
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Position
LG1:complement(15157092..15194128)
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AA seq
751 aa
AA seq
DB search
MEQVAEDLNLSFLLEHEREMILKVLQKDEKLRKREEKRIRKLKNELLEIKRKGSRRPQEL
GERQCARCLKTLGLIFDRGDLCEDCQLRVCNNCRITAPTGRQWKCNVCAKISELKVVTGE
WFLEERSKRFEQGVLSSDVIKQTILSSPITTDSKSTENLLAPSESERPDTPRSNRSAILN
AVDGVRRKGRMKLDKKGSRPTLKPENGVDSTSVTSVLDGDAQSVRSARSAPSPHSNRGGA
VALESSGMPTVPNNLRSQTPDRSSASSDNRRVRPDGAESVASVHSSDSVPEKKAAGHHRT
NSGAPTISVSRASVSSDHSRSEMDLSAPGSDPSDDALSLRSRSVPGLNETEFSDEDAEED
IDALMSAHGKSAGRRLSNAVSTSSTPGSERRWGYLNVPDSDAETSSINSMMSMYSETGDY
GNARVSGEILLNISYSYKTGALSVLVKECHNLATGDERRQRTDAYVKTYLLPDTSRQSKR
KTSIKANTINPVFNENLRYVISHSQLETRTLQVSVWHHDRFGHNSFLGEVELTFDTWEFD
SQIEEWYALQPKVESSIDSTLQYKGELTVVLKYIPAEKNLMLPLDQVQVKKGFLKSKKTS
SFTLPKGGMVELLVKGAKNLTAVKSGGTSDPFVKGYLLPDSNKSTKHKTAVERRTVNPLW
NHTFTYCGLQPGDLNNVCLELTVWDKEALASNVFLGGVRLGAGTGKSYGNEVDWMDSYGE
EQRLWQRMIENPEVPQECTLMLRSSMRKYNT
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtcgcggaggatctgaacctgtcctttctgctggaacatgaaagagagatg
atcctgaaggtgctgcagaaagacgagaaactgaggaaacgagaggagaagaggatacgg
aagctgaagaatgagctgctggagatcaaacgaaagggttcccgtcggccccaggagttg
ggggagagacagtgtgctcgctgcctgaagactttgggcctgatttttgaccgcggagat
ctctgtgaggactgtcagctgcgcgtctgcaacaactgccgcatcacagctcccaccgga
cgccagtggaagtgtaacgtttgtgccaagatctcggagctgaaggtggtgacaggagaa
tggttcctggaggagcggtccaaacggttcgagcagggagtgctgagcagcgacgtgatc
aaacagacaatcctgagcagcccgatcaccacagactcaaagtctacagagaacctgttg
gccccctctgagtctgagagacccgacaccccaagatccaacagaagtgcaatactcaat
gctgtagacggagtcaggaggaaaggaaggatgaaattggataaaaaaggcagccgaccc
accttgaagccagagaatggggtcgacagcaccagtgtcacatctgttttggatggagat
gctcagagtgtacgaagcgctcgctctgctccgagtccgcattcaaataggggtggtgcg
gtggccttggagtcctcagggatgcccactgtacccaacaacctgcgatcccaaactccg
gacagatcatccgcctccagcgacaaccggagggtcaggcctgatggtgcggagagtgtt
gccagtgtacactccagcgacagcgtgcccgagaagaaagctgccggccatcacaggacg
aactctggagctccaaccatctctgtgtcaagggcctctgtctcgtcagatcacagtcgt
tcagagatggacctgtcagctccgggttctgatcccagtgatgacgccctcagtctcaga
agccgttcggtccccgggctcaacgaaacagagttttctgacgaggatgcggaggaagac
attgatgccctgatgtcggcccacggcaagtctgccggccgacgcctcagcaacgcagtg
tcaacgtcttccactcctggttcagaaagaaggtgggggtacctcaatgtccccgactcg
gatgctgagactagtagtataaacagcatgatgagtatgtacagtgagactggtgactat
ggcaacgccagagtgagcggtgagatcctgctgaacatcagctacagctacaaaaccggt
gctctcagcgtcctggtcaaagagtgtcacaacctggcaacgggagacgagaggaggcaa
cgcacagatgcctatgtgaagacttacctgttgccagatacgtcacgacagagcaagagg
aagacgagcattaaggctaacaccattaaccctgttttcaacgagaatctgaggtatgtt
atcagccactcgcagctggagacacgaactctgcaggtctctgtgtggcatcacgaccgg
tttggacacaacagcttcctcggagaagtggagctgaccttcgatacgtgggagtttgat
tctcagatagaggagtggtacgctctgcagccaaaggtggagagtagtatagactccacg
ttgcagtataaaggagaactgacagttgtgttgaagtatatacctgcagagaagaacctc
atgctgcctctggaccaagtgcaagtgaagaaagggttcctgaaaagtaagaagacgagc
agcttcactctgcctaaagggggcatggttgagcttctagtcaagggagccaaaaatcta
actgctgtcaagtctggaggcacctctgatccttttgtaaaagggtacctgctccctgac
agcaacaaatcaaccaagcacaagacggcagtggagcgacgcacagtgaacccactgtgg
aaccacaccttcacctattgcggcctgcagccaggagacctcaacaatgtctgtctggag
ctcaccgtgtgggacaaagaggctctggccagcaatgtctttctgggaggggtcaggctg
ggagcaggcacaggcaaaagctatgggaacgaggtagactggatggactcatatggggag
gaacagcggctgtggcaacgcatgattgaaaacccagaggtccctcaggagtgcacgctg
atgctgcgatccagcatgcgcaagtataacacatga
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