Lates calcarifer (barramundi perch): 108880489
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Entry
108880489 CDS
T04895
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108880489
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108880489
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108880489
Peptidases and inhibitors [BR:
lcf01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
108880489
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Others
108880489
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Others
108880489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108880489
NCBI-ProteinID:
XP_018527543
UniProt:
A0A4W6F794
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MCMFVFYPRKNREHNGGAGYQEDGMGEHTACLLLLLATLTLSSEVPADDSVGLLTEPQVA
MFCGKLNMHINVQTGKWESDPSGTKSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQ
NWSKKGRKQFRSHTHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAK
ESCGDRTMNLHDYGMLLPCGIDRFRGVEFVCCPVEADQESDSTELEGEESDVWWGGAETE
YSDNSMSRPADTEPATAEGDEDEDEQAEAFERDENGDGDEGEDDDVTDERDSDERSANIA
MTTTTTTTTESVEEVVRAVCWARAESGPCHAMLERWYFVPEKGRCAPFLFGGCGGNRNNF
ESEEYCLAVCSSSLPTMAPSPPDAVDRYLESPGDDNEHADFQKAKESLEAKHREKMSQVM
REWEEAERQAKNLPRADKKAVIQHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRR
LALENYLSALQANPPRPRQVLGLLKKYVRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQV
LTHLRVIDERMNQSLGLLYKVPSVANEIQNQVALIVQRVQSELSQQVSSLQSDGRVDGRV
SYGNDALMPDQAYSSAPMDPGLDGLGFIHPESFNQPNTENHVEPVDARPIPDRGLPTRPV
SALKPEEMPEVRMETEERQNAGYEVYHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVI
TLVMLRKKQYTSIHHGVIEVDAAVTPEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatgttcgttttttacccacggaaaaatcgtgaacataacgggggtgctggatac
caggaggacggcatgggagagcacacggcgtgtctgctgttactgttggcgaccttgacg
ctttcatccgaggtgcccgctgatgactctgtgggtttactaactgagccccaggttgcc
atgttctgtgggaagctcaatatgcacatcaatgtgcagactggcaaatgggagtctgat
ccttctggcactaagagctgcatcggcaccaaggagggcatcctgcagtactgccaagag
gtgtacccagagttgcagatcacaaatgttgtggaagccaaccagcctgtcagcatccag
aactggagcaagaaaggccgcaagcagttccgcagtcacacacacattgtggtgccatac
cgctgcctggttggggagtttgtgagtgatgccctgcttgttcctgacaagtgtaagttc
ctgcaccaggagcgtatggaccagtgtgagagccacctgcactggcacactgtagccaaa
gagtcctgcggagaccgcaccatgaatctccatgactacgggatgctgttgccatgtgga
attgaccgtttccgaggagtggagtttgtctgctgtccagtggaggcagatcaagagtca
gacagcacagagctagagggagaggagtcagacgtctggtggggcggagctgagaccgaa
tactctgataacagcatgtcacgtccggcagacacggagcctgccaccgcagaaggtgat
gaagatgaggatgaacaggcagaagcttttgaaagggatgagaacggagatggtgatgaa
ggtgaagatgatgacgtgactgatgaacgggatagcgatgagcgcagtgctaacattgct
atgacgaccactaccaccactaccaccgaatcagttgaagaagttgttcgagctgtgtgc
tgggcccgtgctgagtcaggcccgtgtcatgccatgctggagcgctggtacttcgtgcct
gagaagggccgctgtgctcccttcttgtttgggggctgtgggggcaacaggaataacttt
gaatcggaggagtactgcctggctgtctgcagcagctcgttgcccaccatggcccccagt
cctccagacgctgtggatcgttaccttgaatctccaggtgacgacaacgaacacgctgac
ttccagaaggccaaggaaagcctagaggccaaacaccgtgaaaagatgtcccaggtgatg
agggagtgggaggaggctgagagacaggccaagaaccttcctcgtgctgacaagaaagct
gtcatccagcacttccaggagaaggtggaggctcttgagcaggaagcagcaggagagagg
cagcagctggtggaaactcacatggcgcgggtggaagctctgctcaacagccgccgtcgc
cttgctctggaaaattatctcagcgcccttcaggccaaccctccacggccccgtcaggtg
ttgggtctgctgaagaagtacgtccgtgcagagcagaaggacaggcagcacacactgaaa
cattacgagcacgtccgcacagtcgacccaaagaaggctgcacagatccgaccccaggtt
ttgacccatctacgtgtgatagatgagaggatgaatcagtcactgggtctgctctacaaa
gttcccagtgttgcaaatgagattcagaaccaagttgcgcttatagtgcagagagttcag
tcggagctgtctcagcaagtctcttccctgcagagcgacgggcgggtggatggcagggtg
agttacggtaacgatgctctgatgcctgatcaggcctacagctctgctcctatggaccct
ggcctggacggactcggcttcatccaccctgagagctttaaccaacccaacacagagaac
cacgttgagcctgttgatgctcgtccaattccagatagaggactgcccacaagacctgtg
tctgctctgaagccagaggagatgccagaagtgcggatggagactgaagagaggcaaaat
gctggttatgaagtttaccatcaaaaactggtatttttcgctgaagatgtggggtccaat
aaaggtgccattattggacttatggttggaggggttgtcatagcaactgttattgtcatc
accttagtgatgctgaggaagaaacagtatacttctattcatcatggtgtaatcgaggtg
gatgcagcagtgacaccagaggagcgtcacctggccaagatgcagcagaacggttacgag
aaccccacctacaaattcttcgagcagatgcagaactaa
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