Lates calcarifer (barramundi perch): 108880520
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Entry
108880520 CDS
T04895
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
lcf03083
Polycomb repressive complex
lcf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108880520
03083 Polycomb repressive complex
108880520
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108880520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108880520
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108880520
Histone modification proteins
HAT complexes
HATB complex
108880520
HDAC complexes
Sin3A-HDAC complex
108880520
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108880520
PRC2.2
108880520
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108880520
Heterochromatin formation proteins
Other heterochromatin formation proteins
108880520
Chromatin remodeling factors
NuRD complex
108880520
NuRF complex
108880520
NuRF complex (fruit fly)
108880520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108880520
NCBI-ProteinID:
XP_018527593
UniProt:
A0AAJ7LQ04
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVRRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPFIIATKTPTSDVLVFDYTKHPPKPDPSGECNPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGSGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaggtgtatgatgatgcagtggaagaaagggtcatcaatgaagagtac
aagatctggaagaaaaatacacctttcctgtatgacctggtgatgactcatgcattagag
tggcccagccttactgtccagtggcttccagatgtccgcaggccagagggaaaggactac
actgtccacaggctggttttagggacccatacatcagatgagcagaaccaccttgtgatc
gccagcgtccaggtacctaatgatgatgcccagtttgatgcctctcactatgacagcgag
aaaggagcagagtttggtgggtttggttcagtaagtggaaaaatagagatcgaaatcaag
atcaaccatgagggagaggtaaaccgagcccgctacatgccccagaatcccttcatcatt
gccaccaagacccccacatctgatgtgctggtcttcgactacactaagcacccgcctaaa
ccagatcccagtggggagtgtaatcctgacttgaggttgaaaggtcaccagaaagagggg
tatggcctttcctggaatcccaacctcagcggcaaccttcttagtgcctctgatgaccat
accatctgtctatgggacattggatctggcccaaaggaggggaagattgtggatgccaag
accatcttcactggccacacagcagtggtagaagatgtttcctggcatttgctccacgaa
tccctgtttggctcagtggccgacgaccagaaactcatgatatgggacactcgatccaat
aacacatccaaagccagccactcggtagatgctcacactgctgaggtcaactgtctgagc
ttcaacccctacagcgagttcattcttgccactggttctgctgataagactgttgcattg
tgggatctaaggaacctcaaactgaagctccactcgtttgaatcccacaaagatgaaatt
ttccaggtacagtggtctcctcacaatgagacgatcctggcctctagtggcactgaccga
cgtctcaatgtctgggatctcagtaaaattggggaggagcagtcagcagaggatgcagag
gatggcccaccagaactgctgttcatccatggtggccacacagccaagatctctgacttc
tcctggaaccccaacgagccctggatcatctgctcggtgtctgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggagccagacaacacccctgcatca
gagctggaggctcagggatcttaa
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integrated database retrieval system
