KEGG   Lates calcarifer (barramundi perch): 108880588
Entry
108880588         CDS       T04895                                 
Symbol
elob
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108880588 (elob)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108880588 (elob)
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108880588 (elob)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     108880588 (elob)
   Cul5 complex
     108880588 (elob)
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108880588 (elob)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 108880588
NCBI-ProteinID: XP_018527676
UniProt: A0A4W6CDZ1
LinkDB
Position
LG11:complement(3384533..3388678)
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRPPEDQRLYKDDVLLNDSQTLGNC
GFTNQTARPQAPATVGLAFRLGDDSFEQLRIEPFSTPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgtttttaatgatccgacgtcacaagacgaccatcttcacagatgccaaagaa
tctaccacagtctatgaactgaagcgcattgtggaaggcattttaaagaggccacccgaa
gatcagaggctttataaggatgacgtgctgcttaacgacagtcaaactcttggcaattgt
ggcttcacaaatcaaacagcccgacctcaggctccagccactgtgggattagctttccgt
ctgggtgatgattcatttgagcagctgaggattgagcccttctccacccccccagagctc
cctgacgtcatgaagccccaggactcgggcagcacagccaacgagcaggccgtacagtga

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