Lates calcarifer (barramundi perch): 108880609
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Entry
108880609 CDS
T04895
Name
(RefSeq) homologous recombination OB-fold protein
KO
K27803
homologous recombination OB-fold protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108880609
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108880609
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Ortholog
Paralog
GFIT
Motif
Pfam:
HROB
IMUP
ATR7
Motif
Other DBs
NCBI-GeneID:
108880609
NCBI-ProteinID:
XP_018527702
UniProt:
A0A4W6CMH3
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Position
LG11:3951923..3959961
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AA seq
616 aa
AA seq
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MTAMTCKLSGLFSIGEDFDDEDLLGTDWAVSSASGPADVAAAVSSCALRASSVAHREPEK
NRPQQTAERSAAPCNGTASRGSTQAAAEQTVALGLRQISSSSSSSSSCSPTLTNTRLNLA
SPQSHTNAEGALKPSVAQDDFDDWDVDLADLDECDGQIGLEPPAPAPPVPTVQPSSLAKT
LRAPACGGIQTLPDQTLREPGAARQLCGSSNHNLPPRTLSAAAPVRSPAPRPTFPSTPPQ
SPGVFRGLTATSPAPSPISRTLIRPHQPQRSWATPGPSPQTRTLFETVSPGPSSSSTTLS
PHPLHTPVLTNRLVQLVSASNKLPKKRSCSEPHRPRTRRFPGPAGLLPQQPQGQSLDNIV
VSVPHTPAHGAVARLPSQASSSQTEEDEFGGGAWAAMKAEMGLDERNPSCFLHSYSVVMV
LRKAALKQLARNKVPNMAVLLKSIIHTHADAKAVFKDPTGEIQGTVHRRLLEDRAEELKV
GAVLLLKQVGVFSPSHRNHYLNVTPNNLLRIYAPDGVSLSSTQLLPFNLEPMLQSPAPSP
AILREPVSRMHLVFDEEDDEGQEGERSTEGGKDPQAPVNTGPQEPTGKSAPQDSGWDADD
DLDELLGELPEDTYSF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgatgacctgtaaattaagtggcctgttcagcattggtgaggactttgatgat
gaggacttgctcgggacagactgggctgtcagctcggcgtctggaccagccgatgtggca
gctgctgtgtcatcctgcgcgctgcgtgcctcttctgtcgctcacagagagccggagaaa
aatcgccctcagcaaactgcagagagatcagctgcaccgtgtaatggcacagcatcaagg
ggcagcacgcaggctgctgctgaacaaactgttgctttgggtttgagacagatctcctcc
tcctcctcctcctcctcctcctgttctcccaccctgactaacactcggcttaatttggca
tcaccacaaagtcacactaacgctgagggggcgctgaagcccagtgtggctcaggatgat
tttgatgattgggatgttgacctggcagacctggatgagtgtgatggccagatagggctc
gaacctcctgctccagctccacctgtgcccacagtccagccttcatctttagccaaaacg
ctccgagccccggcctgtggagggattcagacactacccgatcagaccctgagggagcct
ggcgctgcacgccaactgtgtggctcatctaatcataacctacctccacggaccctttcc
gctgctgctcctgtacgatctccagctccccgccctactttcccatcaacccccccacag
agtcctggtgttttccgtggcctcactgccacttctcctgcccccagccccatttccagg
acactcatcaggccccaccagccacagaggtcgtgggcaactccaggaccttcccctcag
acccgtaccctttttgagacggtctccccaggtccctcctcctcgtcaaccactctcagc
cctcatcctcttcacacaccagtcctcactaaccgcctggtccagctggtatccgcctcc
aataagcttcctaagaagaggtcttgctctgagcctcaccggcccaggacccgacggttc
cccggtccggctggactcctgccccagcagccgcagggtcagagcctggacaacatagtg
gtttctgttcctcatactcctgctcacggtgctgtcgcccggttaccaagccaggcttcc
agctcacaaaccgaggaggatgagttcggcggcggtgcctgggcagcgatgaaggcagag
atgggattggacgagaggaacccgtcgtgcttcctgcactcctacagtgtggtcatggtg
cttcgaaaggcagcactgaaacagctggcaagaaacaaagtgcccaacatggctgtgctt
ctgaagagcatcatccacacacatgctgatgccaaggctgtgtttaaagacccgacaggg
gagattcagggaactgtgcaccgccgtctcctggaggacagagcggaggagctgaaggtc
ggagccgtgctgctgctcaaacaagtcggcgtgttttccccctcccatcgtaaccattac
ctgaacgtgacgcccaacaacctgctgaggatctacgcccctgatggagtcagcctgtcc
tccactcagctcctgcccttcaacctggagccgatgttgcagtcacccgctccgtctcct
gccatcctccgggagccggtgtctcggatgcatctggtgtttgacgaggaggatgatgag
ggacaagagggtgaaagatccacagagggaggtaaagaccctcaagccccagtgaacaca
ggaccacaagagcctactgggaagtcagcaccacaggactcaggctgggatgcagatgat
gacctggatgaactcctgggagagttacctgaggacacctacagcttttga
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