Lates calcarifer (barramundi perch): 108880631
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Entry
108880631 CDS
T04895
Symbol
mybpc2a
Name
(RefSeq) myosin binding protein Ca isoform X1
KO
K12558
myosin-binding protein C, fast-type
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108880631 (mybpc2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108880631 (mybpc2a)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108880631 (mybpc2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
FN3_DSCAM-DSCAML_C
V-set
Il13Ra_Ig
Motif
Other DBs
NCBI-GeneID:
108880631
NCBI-ProteinID:
XP_050930006
UniProt:
A0AAJ8BCZ0
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Position
LG11:3006111..3057395
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AA seq
1126 aa
AA seq
DB search
MCVFPPHSEKPAEEEEVQAAVELPPDEHVPGEEPQMSELTGLFVERPESVTATKGKDITF
VAKVDSTNLTRKPTMKWLKGKWLDLGSKAGKHLQFKESYDRNTKIYTYEMSIIKVVDGDA
GGYRCEVTSKDKCDSCTFDISVQAVQEEQQDNILEAFKRSGDAGEDAGDLDFSALLKKRE
KKQEEPKEEVDVWEILKAAKPCDYEKIAFQYGITDLRGMLKRLKKMKIEPKKSDAFLRKL
DSAYSVDKGKRIQLSVEVADPDAPIKWLKNGQEIKPSAKYVFESVGNKRTLTINKCNLSD
DAAYECVVGEEKCFTEVFVKEPPVTITKLLDDVHTVVGEKVEFEVEVSEEGAHVKWMKDG
VELTKETAGSKYRFKKDGKRHILIINEATKEDIGMYYAVTNGGESKAELEVEDKELEVLQ
SIADLTVKAAEQAVFKCEVSDEKVTGKWFKDGVEVQPSDRIKMSHIGRIHKLTINDVKPS
DAGDYTFVPDGYALSLSAKLNFLEIKIDYVPRQDPPKIHLDTSGSGNKNTIIVVAGNKLR
LDVEITGEPAPTVCWMKGDQVVAEAEGRVRVETRKTLSSFVIEGAERDDEGLYTITVTNP
AGEDKAEVIIKIVDVPNPPENVKCMSVGEDCATITWDPPSFDGGVPIKGYLMERKKIGSS
RWTKLNFDVYESTTYEAKKMIEGVLYEMRVFAVNGIGMSQPSANSKPFMPIAPTSEPTRL
MVDDVTDTTCALKWRPPERIGAGGIDGYIIEYCKEGSDQWVQANEEPVSKNQYRVKGLPA
GEKMLFRVVAVNIAGRSPPATLAQGVTIREIMENPKIRLPRHLRTKLITLVGEKVNLVIP
FQGKPRPVVTWFKDGVPLDDKTVGTRTSEVDTILFIRTAERTHSGKYTLSVQIENMSDSA
DIHIQVVEKPGPPIAVHVTDVWGFNAALEWKPPKDDGNCEIIGYTIQKADKKTKEWFTVY
EHNRRPSCTVSDLVMGNEYSFRVFSENICGLSDEAGISKNTAVIAKTGLAFNPPPFREKD
MNTSPKFTAPLVDRTVVAGYAAAISCAVRGYPKPKIIWMKNNMIIGEDPKFLMQNNQGVL
TLNIRKPSLFDGGRYSCRAINDLGQDEVECKLEVRVVQEKGEEAKK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtctttccccctcattcagagaagccggcagaggaggaggaagtccaggctgct
gtagagttgcctcctgatgagcatgtaccaggggaggaacctcagatgtccgagctgacc
ggtctatttgtggagaggccagagagcgtcacagcaacaaaaggcaaggacatcacattt
gtggctaaagtggactccacaaacttaacaaggaagccaaccatgaaatggctgaagggg
aagtggctcgacctaggtagtaaagctggaaagcacctgcagttcaaagagtcctatgac
aggaacaccaagatctacacttacgagatgagcatcatcaaagtagtggatggagacgca
ggtggctaccgctgcgaggtcacctccaaagacaagtgcgacagctgcacattcgacatc
tccgtgcaggctgtacaagaggagcagcaggacaacatcttggaggcgtttaagcgatct
ggagacgcaggtgaggatgctggtgacctagacttcagtgcgctgctcaagaaaagggag
aagaaacaggaggagcccaaagaggaagtggacgtctgggagatcttaaaggcggccaag
ccctgcgactacgagaagattgcctttcagtacggcatcacagacctgaggggcatgctg
aagaggctgaagaagatgaagatcgagcccaaaaagagtgacgctttcctgaggaagctg
gattcagcctactcagtggacaagggcaagaggatccagctctctgtggaagtggctgac
cccgacgctccaatcaagtggctcaaaaacggacaggaaatcaaaccatcagccaagtat
gtgtttgagagcgtgggcaacaagcggacactcactatcaacaagtgcaacctttcggat
gacgcagcatacgagtgcgtggttggggaggagaagtgcttcacggaggtttttgtcaaa
gagcctccggtcaccatcaccaagctgctggatgatgtccacactgtggtgggtgagaag
gtggagtttgaggtggaggtgtcggaggaaggagcccacgtcaaatggatgaaagatgga
gttgagctgactaaagaaactgcaggttcaaagtacaggtttaaaaaagatgggaagagg
catattttgatcataaatgaagccactaaagaggatattggaatgtactacgccgtcact
aacggtggagagtcgaaggcagaactggaggttgaagataaggagctggaggttctgcag
agcatagctgacctgacagtgaaggctgctgaacaggccgtgttcaagtgtgaagtgtct
gatgaaaaagtgacgggaaaatggttcaaggacggtgttgaagtccagcccagcgatcgc
atcaagatgtcgcacatcggaaggatccacaagctgacaattaatgacgtgaagccttcg
gacgctggggattacacttttgtccctgatggctacgctctttctctctctgcaaaactc
aacttcctggagatcaagattgactatgttccccggcaagatcctcccaaaatccacctg
gacaccagcggctctggcaacaagaacaccatcatcgtggtggctgggaacaaacttcgc
cttgacgttgagatcacaggcgagccggcccccactgtgtgctggatgaaaggagaccaa
gtggtggcagaggccgagggacgggtccgcgtagagacgaggaagaccctgagcagcttt
gtgatagagggggcggagagagatgatgagggcctgtacaccatcaccgtgactaaccct
gctggagaggacaaggccgaagtcatcatcaagatcgtggatgtgcccaaccctcctgag
aatgtcaaatgcatgtcagttggcgaggactgtgccacgatcacatgggaccctccctcg
tttgacggcggagttcccattaaagggtacctgatggagaggaagaagattggctcgtcc
agatggaccaagctcaactttgatgtttatgagtcgaccacgtacgaggctaagaagatg
attgaaggcgtactttatgagatgagagtgtttgcagtcaacggcatcggcatgtctcag
ccaagtgcaaactcaaagcccttcatgcccattgcccccaccagcgagcccactcgtctc
atggtggatgatgtgacagacactacctgtgcactcaagtggcgtcctccagagagaatc
ggagcaggcggcatcgacggctacatcatcgagtactgcaaagaaggaagtgaccagtgg
gtgcaggctaatgaggaaccagtgtcaaagaaccagtacagggtgaagggtctcccagcg
ggggagaagatgctgttcagagtagtggctgtcaacatcgctgggcgcagcccccccgcc
accctcgcccagggcgtcactatcagagagatcatggagaatccaaagatccgcctgcct
cgccatctgagaaccaaactcatcacgcttgtgggcgagaaggtgaacttggtcatcccc
ttccagggtaagcctcgccccgtcgtgacctggttcaaagatggcgttcccctggacgac
aaaacggtgggaactcgcaccagcgaggtggacaccatcctcttcatccgcacggcagag
agaacccactccgggaagtacacgctgtctgttcagattgagaacatgtcggacagcgct
gacatacacatccaggttgtagaaaagcctggtcctcccatcgctgtgcatgtcacagac
gtgtggggtttcaacgctgcgctggagtggaagccgcccaaagacgacggcaactgtgag
attatcggctataccattcagaaggctgacaagaagactaaggagtggttcacggtctat
gagcacaaccgcaggcccagctgcactgtgtctgacctggtcatggggaacgagtattcc
tttcgagtgttcagcgaaaacatctgcggcctcagcgacgaggccggcatcagcaagaac
accgccgtcatcgctaaaacaggtttggcctttaaccctccacccttcagagagaaggat
atgaacacatcccccaaattcacagcgcccctggtggacagaactgtggttgcaggttac
gctgctgccatcagctgtgctgtccgtggctaccccaagccaaagatcatttggatgaag
aacaacatgatcatcggtgaggaccccaagttcctgatgcagaacaaccagggcgtgttg
actctgaatattcgcaagccgagcctgtttgacgggggccgatactcctgcagggccatc
aacgatctcgggcaggacgaggtggagtgcaagctggaggttcgagttgtacaagaaaaa
ggagaggaggcgaaaaaatga
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