KEGG   Lates calcarifer (barramundi perch): 108880661
Entry
108880661         CDS       T04895                                 
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108880661
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108880661
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 108880661
NCBI-ProteinID: XP_050931994
UniProt: A0A4W6C6Q7
LinkDB
Position
LG15:complement(9787034..9799796)
AA seq 2161 aa
MDATQMINDSILESDEEENEEENENKRGQPLAKLCILTNEHIPETELPLFLGENVLGRDP
NTCTLPLPAPSISKQHATICISVYRRRGRHSEVDTEALVWDHASMNGTRKGRLKLTPNVR
YALSDGDSLVVADIPCQYVCCAVDTVSSQGDTRTSGVKANLPGASGEKGGDINTGSKKCV
NGGAKARVSSTKTPVRASCLSFEQTPTQPQGTLVPESDSDSDGERRGGGDRRHKALVSDS
DSHKSSPTCSTFLSPANKIVPESEDESPITPSSSTKNRPHRHVSFSKEETEVDVGGQLLK
GKKALVDDSEDEEGMEEERAAAEGTKSKESGQRVSVKQESNVSFTGEDELPVSTPTASTD
GIPAFNMDSDTDMEGEEEGAASAGPVTLNINQVSQPPDTAQFHMDSDTDVDEDEDALNRA
PKTVPSSDDSIKPTHVNSVVQPEGITANSDTDVDDDATVSDAATKVKPMSFQSAHSADTA
PLTQPKDFHLDSDTDVDEEEEMECGTNKAGSKIDKTPTRLDIKATGPESAPSSLHLDSDT
HDEAIPAPALGEPSLESAATESRATKDGRADTLPDSDTDVEDDSPLVEPVAVATLSVPAG
VVSDSDADTDVDESSMPLAGDGANPPDLRVDSDTDVEDKEADVREAGEGQIPGLCREETP
GIVAPLLQNCSTPVQLSEGQVENMETQAFLSPSSVPFRCAVAPVALSSCSDSQEDEDFVV
AETQSFVLQTQGCQSNPPEDHTMEPTQAFGLEPSGDENDEQSSRGGSFQLGLSDSSHLQC
QAQALAMESTQAFVSTDRSVNLEDTQAYAAISTADRTSAENDPNLEATQAYGADKEPARC
SVMSEKAGHVDLALQATQAYISEPYNDSENETDEDERKNITATAEIQPLGSANLCALMAE
TQPMSAFEEEESLATDKPVSSVQHVKHITKNDKEEREGRRETTQPQQKPSSEILSLAETQ
PMHTFDNEESDDEDPFPGPQRRKPKPLHLEEEQRQPLLSSELSIAETQPMAVSENEESDD
GDSMPGPRKRKAKQLRVEEEETQTLTNSELSAVETQPMDTGENGESDEEDSIPIFRKRRA
KPLQLEDTQTLSSSEVQTQPMGEDEQSDEEDFIPGPRKGKAKPLQIEDEQTQPLTIETQP
VLTGEDEESDDEDSIPGPCKRKAKALQLEEEETQPLTISEFSTVETHSLETQSGVQPERQ
RMRQSEAGTSGVSVRNKKETRARLREEEEQAECSEPPKRQTRGKSKALPTTRGRRGTSRP
DEDKSGKEEEVEQTRRARGKKSMRQQKDDEEKGEKHETEGEENAGNGNLIKEKQEGGLGE
ERDVADLRHQERENMEKEKRETERERKRDEIERQHRRGEQERLERERKEKEEQERLQAEN
TKRIRLEQERAEKERKEQEEKERSDRLKREKEQLERERKENEEKERLEREKAEQEEREIL
EREEKERIERERKEQEEKERLETEKKELEEKLERERKERENHARLQREERERLEKEKETK
EKQIKEQQQNKEEVNKPKVPIRGRRAARSTAATQSTTEPEQDPTVSANDDVPARRTRSRS
NSSNSVSSERSASSINTQEGKGRGRGRGAKRISEPPQAGIARSSNRRRTVAAETTEQDNN
DISHQGVLSRSNSSNSLNSEISSCSASSQNRGRGGRQRGRQRKTEPAPNSILPINWSDQN
STPKPAARGRRGRKTEGSSNVVPQEDEEEKAGSQQTSNTRGQRRANTNDSEPTAAHEEDQ
SNQEEDCANEESPLKRKVRGRGQKAVKSETVEAPVAPSVSDGDEAKDKRKGRKRELEAHT
EDSSSSSKILKGKERAQTTEATKEEGQDETKDENPVHVKRRGRASSAQAKKNAKESPLEV
EVKEESEKRARGRLSAVQKNKKEEQEESGASVSSMKQDAKAEASEPLQPQTPTSTVSRKR
QAPADSSPVAKTPRSSSASPAASGRLRAASQAYKVLFTGVVDEAGERVLARLGGSMAKGV
ADMNCLVTDKVRRTVKFLCAVAKGVPIVTTHWLEKSGKAGSFLSPNAFVVKDSEQEKKFS
FCLQESLRIAGSQPLLQGYEIHVTKSVKPEPVQMKDIISCSGATFLPKMPSSHKPQTVVI
SCEEDWLLCSPAVSASLPVVTAEFILTGILQQKVDFRTHALSAPVTNLQPAGGRGRGRKK
T
NT seq 6486 nt   +upstreamnt  +downstreamnt
atggatgctactcagatgatcaatgactcaatcttggagtcagacgaggaagaaaatgaa
gaggagaatgaaaataagagggggcaaccactggctaaactgtgcatcttaacaaatgaa
cacatccctgagacagagttgcccctctttttgggagaaaatgtgctgggccgtgacccc
aacacctgcaccctgcctttgccagcaccctcaatatccaagcagcatgccaccatctgc
atctcggtttaccggagaagaggtcgtcacagtgaagtggatacggaggctttagtttgg
gaccatgcgagcatgaatgggacccgcaaaggtcgcttaaagctgactcctaatgtacgc
tacgccctcagtgatggtgacagtttggtggtggcggacatcccatgtcaatatgtctgc
tgcgccgtagacacagtctcttctcaaggggatacaaggacttcgggggtaaaggccaac
ttgccaggtgcctcgggagaaaagggaggtgacataaacacaggcagcaagaaatgcgtc
aacggaggcgcaaaggctagggtgtcatcaacgaagactcctgtcagagccagttgcctg
tcctttgagcaaactccaacccagccacaggggaccttggtcccagaatctgactcagac
tcagatggagaaagaaggggaggaggagacaggaggcacaaggctctagtgtctgattct
gactcccataaatctagtcccacttgttctaccttcctgagtcccgcaaacaaaatcgtc
cctgaaagtgaggatgaaagtcccatcacaccgtcctcctccactaaaaatagacctcac
agacatgtcagctttagcaaggaagagacagaagtagatgtgggggggcagctgctgaag
ggaaaaaaggcactagtggacgacagtgaagatgaggaagggatggaggaagaaagagca
gcagcagaagggacaaagtctaaggaaagtggacaacgtgtgtcagtgaagcaggaaagc
aatgtcagtttcacaggtgaagatgaattgcctgtgtctacaccaacagcctccacagat
gggatccctgcatttaacatggacagtgacactgatatggagggagaggaggaaggagcg
gcatctgcaggtcctgtgaccttgaacataaaccaagtcagtcagccaccagacacagct
cagtttcacatggacagtgatacagatgtcgatgaggatgaagatgccttaaacagagct
cctaaaactgtgccttcctctgacgacagtatcaaacctacccatgttaattcagttgtt
cagcctgagggaatcactgcgaacagtgacactgatgtggatgacgatgctactgtctcc
gacgctgccacaaaagtgaaacccatgtcatttcagagtgcacactcagctgacactgct
cctttaacgcagccgaaagatttccacctagacagtgacacagatgttgatgaggaagaa
gaaatggaatgtggaacaaataaagcaggctctaaaatagacaaaactcccactagatta
gatataaaggcaactgggcctgaatctgcccctagtagcctacatctagacagtgacaca
catgatgaggcgatccctgcccctgccctcggcgaaccctcgttggagtctgctgccaca
gaatcacgtgccactaaagatggaagggctgacactttgcctgacagtgacacagacgtg
gaagacgattctcctctggttgaacctgttgctgtcgcaaccttgtcggtccctgctggt
gtcgtgtcagattctgatgcagacacagatgtagatgaatccagcatgccacttgctggg
gatggggccaacccacctgatcttagagtggacagtgatacagatgtggaggataaagaa
gcggatgttagagaggcaggtgaaggccagattcctggcctatgcagagaagaaacacct
gggatagtcgctcctcttctacagaactgctccactcctgtacaactgtcagagggacag
gtggaaaatatggaaactcaggctttcttgagtccttcttcagttccatttagatgtgca
gttgcccctgtagcattgtcttcctgctcagacagccaggaggatgaagactttgttgtg
gcggagacgcagtccttcgttcttcagacccaaggttgccagagcaaccctccagaggac
cacaccatggaacccacccaagcctttggacttgaaccttctggtgatgaaaatgatgaa
cagtccagcagaggagggtcttttcagctgggattgtctgacagcagccacctgcagtgt
caggcccaagctctagccatggagagcacccaggcttttgtctctacggataggagtgta
aatctggaagatacccaagcatatgcagccatctcaactgcagacagaacctctgcggag
aatgatccaaatctggaagctacacaggcgtatggagcagacaaggagcctgccagatgt
tcagtaatgtctgaaaaagcaggtcatgtagatttggctctacaagcaacacaggcatat
atttcagagccctacaatgattcagagaatgaaacagatgaagatgagagaaaaaatatt
actgctactgctgagattcagcctttaggctctgccaacttatgtgctctcatggcagaa
acccaaccaatgtctgcctttgaggaagaggagagtttggcaacagacaagcctgtttcc
tctgtacaacatgttaaacacataacaaagaatgataaagaggagagggagggtcgtaga
gagacaactcaacctcaacagaagccctctagtgaaattctatctctggctgagactcag
cccatgcatacatttgacaatgaggaaagtgatgatgaagacccatttccaggtcctcaa
agaagaaaaccaaagccattgcaccttgaagaggagcagagacagccccttcttagttct
gagttatcaattgctgaaactcagcccatggctgtaagtgaaaatgaggaaagcgatgat
ggggactcgatgccaggccctcgaaaaagaaaagcaaagcaactacgagtcgaagaagag
gagacacaaacgctcacaaactctgagctctctgctgtcgaaactcaaccaatggataca
ggtgaaaatggagaaagtgatgaggaagactcaattccaatttttcgaaaaagaagagca
aagccgctgcaacttgaggacacgcagaccctctctagttctgaagtccaaactcagccc
atgggtgaagatgagcaaagtgacgaagaggactttattccaggtccacggaaaggaaaa
gcaaagccactgcaaattgaagatgagcagacacagcccctcactattgaaactcagcct
gtactcacaggtgaagatgaggaaagtgatgatgaagactcaattccaggtccatgtaaa
agaaaagcaaaggcactgcagcttgaagaagaggagacacaaccgcttacgatttctgag
ttctctactgtagaaactcactctttggaaacacaaagtggtgtgcaacctgagagacaa
aggatgagacaatctgaagctggaaccagtggagtcagtgttagaaataaaaaagagaca
agggcaagattaagagaggaggaagagcaagcagagtgttctgaacctccaaagagacag
acaagagggaagagtaaagctttgcccactactagaggaaggagaggaacgtccaggcct
gatgaggataagagtgggaaagaggaggaggtagagcaaactaggagggctagagggaaa
aaatccatgaggcagcagaaagatgatgaggaaaagggagaaaagcatgaaactgaagga
gaagagaatgctggaaatggcaacctaataaaagaaaaacaagaagggggactgggagag
gagagagatgttgcagacctcagacatcaagagagagaaaatatggagaaggaaaagagg
gagactgaaagagaaaggaaacgagatgagatagagaggcagcatagaaggggagaacaa
gaaagattagagagggaaagaaaagagaaggaagaacaagagagattgcaggctgaaaat
acaaagaggataagacttgaacaggagagagcagagaaagagagaaaggaacaagaagaa
aaggaaagatctgatcggctaaagagagaaaaagaacaattggagagggaacgaaaggag
aatgaagaaaaagagagattggagcgtgaaaaggcagaacaagaagagagggagattttg
gaaagagaagagaaagagagaatagagagggaaagaaaggaacaggaggaaaaggaaaga
ttggagacagaaaagaaggaactagaagagaagcttgaaagggagaggaaggaacgagaa
aaccacgcaagactgcagagggaagaaagagaaagactggagaaagaaaaagagaccaaa
gaaaaacaaataaaagagcaacaacaaaacaaggaagaagtgaacaagcccaaagtgcct
ataagaggtcgaagagcagccagaagtacagctgccacccaatctacaacagagccagaa
caagacccgaccgtatcagccaatgatgatgtcccagcaaggcgaaccagatctcgctcc
aactcctccaactcggtcagctctgagagatccgcctcaagcatcaatacccaggagggc
aaggggagagggcggggcagaggggcaaagaggatcagtgagccaccccaggcaggcatt
gccagaagcagcaacaggaggaggacagtggctgcagagacaactgaacaagacaataat
gatatttctcatcagggagtcctttcgaggtctaactcctccaattctctcaattctgag
atttctagctgcagtgcaagctcccaaaaccgaggaagaggaggtaggcagcgaggaaga
cagaggaaaacagagcctgcgccaaactccatccttcctatcaattggagtgatcagaat
tcaacacccaaacctgcagccagaggcaggaggggaaggaaaacagagggatcctctaat
gtggttcctcaggaggatgaagaagagaaagcaggctctcagcagactagtaacacaagg
gggcagcgcagagccaacacaaatgactctgaacccactgctgcacatgaggaagaccag
tcaaatcaggaggaagattgtgccaatgaggaatcaccgcttaaaaggaaagtcaggggc
agaggacaaaaagcagtaaagagtgaaactgtagaggcaccggtggccccctcagtcagt
gatggagatgaggctaaagacaaaagaaagggaaggaagagagagttggaggcacataca
gaggattctagcagtagttccaaaattcttaaagggaaagagagagcccaaacaacagag
gcaacaaaggaggaaggtcaagatgaaacaaaagatgagaatcctgttcatgttaagagg
agaggtagagcatcaagtgctcaagccaagaagaatgcaaaagaatctcctcttgaagtg
gaggtgaaagaagagagtgagaagagagccagaggtcggctgtctgcagtccagaaaaat
aagaaagaggagcaggaagaaagtggtgcatctgtcagttccatgaaacaggatgcaaaa
gcagaagcatcagagcctctacagccccagactccaaccagcactgtatcccggaagcga
caggctcctgcagactcctctcctgttgcaaagactcctcgctcctcctctgcttccccc
gcagctagtggtcgactacgagcggcgagccaggcctacaaggtgctgttcacaggtgtg
gtggatgaagccggggagagagtgttggctcgtttaggaggcagcatggccaaaggtgtg
gcggacatgaactgcctggtgactgataaagtgcgaaggactgttaagttcctgtgtgcg
gtggccaaaggagtccccattgtcaccacacactggctggaaaagagtggcaaagctggg
agcttcctgtctcctaatgcttttgttgtgaaggattcggagcaggagaagaagttcagt
ttctgcctccaggaatctctgaggattgccggcagtcagcctctcttacagggatatgag
atccatgttacaaaatcagtgaagccggagccagttcaaatgaaagatataatctcctgc
agtggagccacctttctacctaagatgccctcttctcacaagcctcagactgtagtgatt
tcctgtgaggaggactggttgctatgcagcccggctgtctctgcatctctccccgtcgta
actgccgagttcattctcacgggaatccttcaacagaaagttgactttcgaacccatgct
ctctctgcccctgtaactaatctacaacctgcaggaggcagaggaaggggcaggaagaag
acatag

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