Lates calcarifer (barramundi perch): 108880665
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Entry
108880665 CDS
T04895
Name
(RefSeq) multiple epidermal growth factor-like domains protein 8
KO
K23664
multipile epidermal growth factor-like domains protein 8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108880665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Kelch_4
Kelch_5
EGF_LMN_ATRN
Kelch_1
CUB
Kelch_6
EGF_TEN
EGF_laminin
EGF_3
NANM
PSI
EGF_CA
Kelch_2
EGF_PEAR1L
EGF_Teneurin
EGF
cEGF
hEGF
Motif
Other DBs
NCBI-GeneID:
108880665
NCBI-ProteinID:
XP_018527781
UniProt:
A0A4W6BI35
LinkDB
All DBs
Position
LG15:complement(9111681..9131016)
Genome browser
AA seq
2890 aa
AA seq
DB search
MGPKRRELALPVMASPLPVSFILVLLLLAESPVCQAGDCKGHRQVLRGPPGYVTDGPGNY
SVNGNCEWLIKAPSNSHRIVLNFTFMDTECTYDYLFVYDGDSYQSPLLASLSGNTLPQPI
EAKSGKMLLHLFSDANYNLLGFNATYTFSLCPGACGGHGRCDSSTSKCQCHQDWGGASCT
TPLCSKDCSVNGQCDKKGERCLCNPGFLGQSCQLGLHDDVGVGQWWRVSEGNPYTPPRTG
SAGVYLSSTGAMYLFGGFDLNRALGDLIKYNFTSNQWDSRSYGHSPVARHSHTAVEWMGN
MVIFGGELANGSLASDVWMYRPLNDDWQQLGFSTTRGAPKLANHAAAVVDDYLYVFGGRT
EEDMFSSSLYRFGLRGSGRWETVQPTGGKPPATAGHSMVFHSPSRTLLVYGGHRPTTARF
SVRVNNTDVFHVDRRFWTSFRSRFPATGPRERAFHSATVIGNYMVVYGGNVHIHYQEEKC
YDEEIFFYHLGCHQWVSAGERWSLRGDAVRGRYSHVAAVMEGRVLLVAGGYSGVARGDLV
AYKVPLFVSSDQGDRDAVCAEALDESMCLKNPECSWCEGRCREYQPTNPCGSTGCLGLAR
FLSDCQSCLVFSGTPAFLARAPGEFGWCVQNESCLPVSERSACRVDQISGAYGWWGERTL
FLTSLHSCRTENYVPGLHLLTFQHPRNDSQPDKVSILRSTNIILSPTTEMDVALQFRGFI
HPLWGAPPPAPPPTETVSMWARIQRLHFEAQMASGPNSSQLEVVGRWAAQQEKELKLLAR
TDGSRLFSNLTRGNHYLVQAEGYLNNSGSGQTSEMALIWNRTLPGGSEISFLFLEPYRSG
SCSGYMSCLACLSDQSCGWCPSLSRCLLRDGPDLKLCPEGEKGEGKEEDQRHLLLAPQQC
TLCEEYRDCSACTQDPYCEWQINSSKKGDYQCSRRGRLDGSIRDPRGCPRVCNQRKTCGE
CLSNSSQCAWCESAQACFYFAAYLTKYPYGECRDWYDSVHSVPQCKQCSALNTCTDCLRT
FQCGWCGDYNNPTIGKCLRGDWAGMDDPSVYNCSVAVAEARAANPEPQTSAPPRPLEMEM
ELEHFDDEEQDAIWSYPTCPDVEECRLGLHNCHPFATCINTPTSYECHCERGYTGDGTLH
CNQTCYNECREGQCSGSPRFECECSLGWTSDPATLVLSGVECDVDCGCNFHSTCITAPGI
CDECQDWTTGPHCEHCRPGSFGSALASGGGCVPCECNGHGDPLRGYCHNQTGQCYCTHNT
QGPHCESCLPGYYGDPRNNGTCYRQCQGRSVLLSSTTSSAMPLSSSLGWRSGTEGKGGLS
HCLWVLSVTENLAPCLPRQLCPPVALTLHPDSHTYCRSSYVYVFDGLPRFLGNGVVHSDH
NLIGAFCGTTRTQPITVEATSGVISVYFEANVSSNKPQGFNASFWVRRCHQSSDEGDEGS
PVCPGGTQCQGGLCQCPQGYGGPHCDRPTCPQDCGIAEGRGACNISLGVCVCTDSWAGSD
CSVPRDPNSLVWETLLDTQLTVNQAHRFLHRMGHSLVSGPQGNLWMYGGLSLSEGILGNV
YRYSVLEHRWTQMLTSSVEEGSTPSPRYHHASALLTSHESGSGSHGASHNFMLVVGGVTQ
SGVAMDTWSLNLSSLVWREHKSSVLPPVAGHTLTVRRDSSVLLIGGYSPENGFNHHLLEF
SPHSGNWTIAPHTGTPPTGLYGHSAVYHEQTDAIYVFGGYRFHVETVEPSGELYSLYYPN
LTWSLLVPSQGNKPLSRFFHAAALIKDTMVIVGGRTEAEDYSNSVSLYQINCNTWIQPVS
AVGDPVNRSVSLAMTSWDGRLFLSGGFNGVTLGRLLTLTVPSDPCALLPTPEACNTTTGS
CVWCRGSCASSDTAERMGCFTSQSPCSPTPRQPDQCRRLKTCSECLARHPKTFSSPSQPA
LQCKWCTNCPEGACISSSVSCTSEHDCRINQREIFLSSNCTETSCEASDCPKCTASGKCM
WTRQFKRTGETRRILSVNPTYDWTCFSYALLNVSPMQVESSPPLPCPPPCHSLHNCSLCL
GSRGSDGGWQHCVWSMALQQCMSPSFVPLRCEAGQCGRLLSGGDSCSPQCSQLTQCSQCI
ARPQCGWCATRGGNGAGRCLQGGLDGVNEGVCPLRNSSWSFLHCPEEDECANGHHHCNST
QDCHDLPQGYHCTCKQGYILSSVSGQCEPVCAQGCVNGTCVSPGVCQCHFGFVGDNCSSQ
CSCNKHSNCAGVNKPDVCLECHNNTIGKHCEKCKPLFVGSAKGGGTCRPCREFCRGNSAV
CLSRDEHKKALENPRLFPLDPNSIQNWVSEGPTEENAVCVNCQNNSVGDKCESCLSGYFL
LQGKCEKCQCNGHADTCNEHDGTGCPCQNNTETSSCLSSPQSDRKDCYRQQCAKCKDSFN
GTPVNGRQCYRQFNVDTECCFDPTSQTNCFHDPTIRNLPKGRTVFFAAQPKFTNVDIRVT
IDVTFGEVEVYVSNSHDTFIVDVDRYTGIHTIKIEDESVSRGAGTGVDKDSPPSPIKVFA
NASSSLGGPVLSHNPLQLQAKAPGAEREIREERAEGLITYITVWKPQTVLIVRAVRDRVV
ITFPHEVHSLKSSRFYIALRGVGTEEKEGESQGLLFLRQDQAHIDLFVFFSVFFSCFFLF
LSVCVLLWKVKQFLDFRREQRRHIQEMTKMASRPFAKLTIYLEPEEPQLIYLPSAGGGVG
GSTVSLAHARTGKLGGVVVGQRGRAGAVSYKHDPGSGPTAHHHHHLTLGGGGNSGQHLPL
HYLNTHHYASTTAGTPASHHHHPSTYSGYQHFCRSDPFLSQLMGFSYSSFKVGPITLEPT
DDGMAGVATVLFQLPGGVLAPNRACLGSALVTLRQNLQEYCGHGNGGGHPGAGAGRKGLL
GHQHLTTMAM
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaagagacgggaactggctttgccagtgatggcctctcccctccctgtctcc
ttcatcctggtgttactgctgttggctgagtcacctgtgtgccaggcaggggactgcaag
ggccacaggcaggtgttgaggggaccaccaggctatgtcacagatggcccaggaaactac
tctgtcaatgggaactgcgagtggcttatcaaagctcccagcaacagtcaccgtattgtc
ctgaattttaccttcatggacacagagtgtacctatgattacttgtttgtgtatgatggt
gactcctaccagagccctctcctagccagtctgagtggcaacactctgcctcagcccatt
gaagccaagtctggcaagatgctgcttcatctcttcagtgatgctaattacaatctgctg
ggcttcaatgcaacctacactttctctttgtgccctggagcctgtggtggtcatggccgc
tgtgattcctctacatcaaagtgccagtgccatcaggactggggaggagcatcttgcaca
acccctctgtgctccaaggactgttctgtgaatggccagtgtgacaagaaaggagagcgc
tgtctgtgtaacccaggcttcctgggtcaaagctgccagcttggactccatgatgacgtc
ggggtggggcagtggtggcgtgtgagtgagggaaacccctacacacctcccaggacaggt
tctgctggtgtgtatctgtcctccactggagccatgtacttgtttggagggtttgatctg
aacagagctcttggtgacttgatcaaatacaatttcacatccaaccaatgggacagcagg
tcttatggtcactctcctgtggctcgtcactcccacacagccgtagagtggatgggtaac
atggttatctttggaggagagttagccaatggctccttggccagtgatgtctggatgtat
cgcccacttaatgatgactggcaacagctcggcttttcaactacacgtggcgctcctaaa
ctggctaatcacgctgcagctgtagtagatgactatctctatgtctttggaggtcgcact
gaggaggatatgttttcctcttctctgtatcggtttggtctgcgtggctctgggcggtgg
gagacagttcagcccaccggtggtaaacccccggccactgctggccactccatggtgttc
cacagcccatccaggacactgttggtctatggaggccaccgacccaccactgcaaggttt
agtgtgagggtgaacaacactgacgtgttccacgtggacaggcggttttggacatccttc
cgttcccgtttcccagcaacaggccccagagagagagctttccactcagccactgtcatt
gggaactacatggtggtctacggagggaatgtgcatattcactaccaagaggagaagtgc
tacgatgaggagatctttttttaccacctgggctgtcaccagtgggtgtctgctggggag
agatggtcactccggggggatgctgttcgggggcgttactctcatgttgctgctgtgatg
gaaggacgagtgctgctggttgctgggggctacagtggtgttgcccgtggagacctggtg
gcttataaagttccactgttcgtcagtagtgatcaaggcgacagggatgctgtttgtgct
gaggcgctagatgaaagtatgtgcctcaagaacccagagtgcagctggtgtgaaggccgc
tgtcgagagtatcagcccacaaatccgtgtggcagtactggttgcctgggcctggcgcgc
ttcctgtctgactgtcagtcctgtctggtgttcagtggcactccagcttttctggcccgt
gcccctggtgaatttggctggtgtgttcagaatgagtcctgcctaccagtgtcagagcga
agtgcgtgccgtgtggaccagatctcaggggcgtacggctggtggggggagcgtaccctt
ttcctaacctccctccactcctgtcgcaccgagaactatgtcccgggactgcacctgctc
accttccagcacccccgcaacgactcccagcctgacaaggtttccatcctccgcagcacc
aacatcatcctcagccccaccacagaaatggacgtagccctgcagtttaggggcttcatt
cacccgttgtggggcgctcctccaccggcaccccctcccactgagactgtctccatgtgg
gctcgcatccagaggctccattttgaggctcaaatggcatcagggccaaactccagccaa
ctggaggttgtgggtcgttgggcagcccagcaggagaaggagttgaagcttctggctcgc
acagatgggagtagactgttctctaacctaaccaggggcaaccattaccttgttcaggca
gagggctacctcaacaactcaggttcaggacagaccagtgagatggcactgatctggaac
agaactttgcctggagggagtgaaatctctttcctgttcttggagccttaccgttcaggc
tcctgctcaggatacatgtcctgtctggcctgtctgtctgaccagtcatgtggctggtgc
ccgtctttgtcccgctgcctactgcgagacggcccagacctcaaactttgccctgagggt
gagaagggtgaaggcaaggaagaagatcagcgccatctgctgttggctcctcagcagtgc
accttgtgcgaagaatacagagactgttctgcttgtactcaggatccttactgtgagtgg
cagataaactccagcaagaaaggtgactaccagtgcagtcgacggggaagattagatgga
tctatacgtgacccaagggggtgtcctagagtctgcaaccagagaaagacgtgtggtgag
tgcctctctaactccagccagtgtgcatggtgtgagtcagcccaggcctgcttctatttt
gctgcctacctcacaaaatacccctatggagagtgcagagactggtatgacagtgttcat
tcggttccccagtgtaaacagtgttcagctttaaacacatgcacagactgcctgcgaacg
ttccagtgtggctggtgtggtgactacaacaatcccacaattggaaaatgtttgagggga
gactgggcaggaatggatgatccctctgtgtataactgcagtgtggcagtggctgaagca
cgagctgccaaccctgaaccccagacctcagccccacctcgaccactggaaatggagatg
gagctggagcactttgatgatgaagagcaagatgcgatctggtcctaccccacctgccct
gatgttgaagaatgcaggctgggcctccacaactgtcacccctttgccacttgcatcaac
actcccacctcctacgagtgccactgtgagagaggatacacgggagatggcacattgcac
tgcaaccagacgtgctacaatgaatgtcgtgagggtcaatgcagtgggagcccacggttt
gagtgtgaatgttccctgggctggacatctgaccctgccactctggttctgagcggtgtt
gaatgtgatgtggactgtggctgcaacttccattccacgtgtattactgccccagggatc
tgtgatgaatgccaggattggactacagggcctcactgtgagcactgccgtccaggtagc
tttggctcagccctggctagtggcggtggctgtgtgccttgtgagtgtaacggccatggt
gaccctctgcgtggctactgtcacaaccagacaggccaatgctactgcacccacaacact
cagggaccacactgtgagtcctgcctgcctggttactatggagaccctaggaacaacggc
acatgctaccgccagtgccagggccgttctgtgctgctctcctccactacatcctccgcc
atgcctctctcctcttctctgggatggcgaagtggcacagaggggaaaggaggactttct
cattgtctgtgggtcctgtctgtgactgagaacctggcgccttgtctgcccagacagctg
tgcccccctgtagccctcactcttcaccctgactcccacacatattgtagaagctcatat
gtctatgtgtttgatggccttcctcgttttctgggtaatggagttgtacattcagatcac
aacctaattggagcgttttgtggcaccacaaggactcagcctatcacagtagaggccact
tcaggtgtgatttctgtctactttgaggccaatgtctcctcaaacaaacctcaaggcttc
aatgcatctttctgggtgcggcggtgtcaccagagctctgacgagggtgacgaggggtca
cccgtgtgtccaggtggaacccagtgccagggtgggctctgccagtgccctcagggatac
gggggaccccactgtgaccggcccacgtgtcctcaggattgtggaatagcagaaggaaga
ggagcttgtaacatatctctcggagtgtgtgtgtgcacagacagctgggctggctcagac
tgctctgttcctcgtgaccccaacagcctggtctgggaaacactgctggacacacaactg
acagtgaaccaggcccacaggttcctccacaggatgggccactctctggtgtctggacca
cagggcaatctctggatgtatggaggactatctctgtcggagggcattctgggaaatgtc
tacagatactctgtgttggagcatcgttggacccaaatgttgacaagctctgtggaagaa
ggctcaactcctagccctcgctatcaccacgcctctgcactgctcaccagtcatgagtct
ggctctggaagccatggagctagtcacaacttcatgttggtggtgggcggtgtcactcag
agtggtgttgccatggatacttggagtctcaatctcagcagtttagtctggagagaacac
aagagctcagtgctgcccccggtggcaggccatactcttactgtacgccgtgactcctct
gtgctgttgattggaggttactctccagagaatggcttcaaccaccatctactggagttc
agccctcattctgggaactggaccattgccccacacactggcacaccacccacaggttta
tatgggcattcagcagtctaccatgagcagactgatgccatctatgtctttggaggctac
cgctttcatgtggagacagtggagccttcaggcgagctctacagtttgtactaccctaac
ctcacctggtctctgctggtcccttcacagggtaataagcccctgtcccgtttcttccac
gccgcagccctgatcaaagacaccatggtcattgttgggggaaggacagaagcagaagac
tacagtaactcagtgtctttgtatcagatcaactgcaacacctggatacaaccagtctca
gctgttggtgatccagtaaatcgttcagtgtcccttgccatgacaagctgggatggccgt
ctcttcctgtcaggaggcttcaatggtgtcacactgggtagactcctaaccctgactgtg
ccctctgacccctgtgccctgctgcctacgccagaggcctgcaacaccaccacaggcagc
tgcgtctggtgtaggggaagctgtgcttcttctgacacagctgagagaatgggctgtttc
accagccagtctccctgttccccaacccctcgccagccagaccagtgtcgcagactgaag
acctgcagtgaatgtctagcccgacaccctaagaccttctcaagtccatcacagcctgct
ctacagtgtaagtggtgcacaaattgtccagagggggcctgtatcagcagctctgttagc
tgtacttctgaacatgactgtcgaatcaaccaaagagagatctttctgtccagcaactgc
actgagaccagctgtgaggcctctgactgccccaaatgtactgcttctgggaaatgcatg
tggactcgccagttcaaacgtacaggtgagacgaggcgcatcctgagtgtgaaccccact
tacgactggacatgtttcagttacgccctgctcaacgtctcacccatgcaggtggagtct
tctccccctctgccgtgccctccgccttgccacagtctgcataactgcagcctctgtctg
ggctcgagaggctctgacgggggctggcagcactgtgtgtggagcatggcactgcagcag
tgcatgagcccatcttttgtgcccctgcgatgtgaggcaggtcagtgtggtcgactgctc
tctgggggggactcttgctctccccagtgctcccagctcacccagtgctcccagtgcatt
gccaggcctcagtgtggctggtgtgccactcgggggggcaatggggctggacgctgcctg
caaggaggacttgatggggtgaatgagggtgtttgccccctgagaaacagcagctggtcc
tttctccactgtccggaggaggatgagtgtgctaacggccatcaccactgcaacagcacc
caggactgccacgacctaccccagggataccactgcacctgcaaacagggttacatactc
agcagtgtttctggtcagtgtgagccagtgtgtgcacaaggttgtgtgaacgggacatgt
gtgtcccccggagtttgccagtgtcactttggctttgtgggggataactgctcctctcag
tgcagctgcaacaaacacagcaactgtgctggtgttaacaaaccagatgtttgtcttgag
tgccacaataacacaataggaaagcactgtgagaagtgtaagccactgtttgtgggctct
gccaagggaggcggcacttgtcgtccatgccgggagttttgcaggggaaacagtgccgtg
tgtctgtcccgggatgaacataagaaggcccttgaaaacccacggctcttccctctggat
cccaacagtattcagaactgggtgtctgagggtccaacagaagagaatgctgtgtgtgtg
aattgccagaacaacagtgtgggagacaagtgtgagagctgcctcagtggctacttcctg
ctgcaggggaagtgtgagaagtgtcagtgtaatggccatgcagacacatgtaatgagcat
gacggcacaggttgcccctgccagaacaacacagagacctcctcctgtctgagcagccct
cagagtgaccgcaaagactgctacaggcagcagtgtgccaagtgcaaagactccttcaat
ggcacaccagtgaatgggcgtcagtgttaccgtcagttcaacgttgacacagagtgctgc
tttgaccccacatcccagaccaactgcttccatgatcccaccattcgtaacctgcctaag
ggtagaacagtgttctttgctgcccagccaaagttcaccaacgttgacattcgggtcacc
attgatgttacttttggtgaagtggaggtgtatgtgtccaactctcacgacaccttcatt
gtggatgtggaccggtacacagggattcacaccatcaagatcgaggacgaatcggtatcg
cggggggcagggactggagtagataaggattccccaccgtcccccattaaggtgtttgcc
aatgcctcatccagtcttgggggtcctgtgctatcccacaacccactgcagctgcaagca
aaagccccaggtgccgaaagagaaatcagggaggagagggccgaaggactcatcacctac
atcactgtgtggaaaccacagacggtgctgatcgtccgggctgttcgagatcgtgtggtc
atcaccttcccccatgaggtgcactccctgaaatccagccgcttctacatcgctctgaga
ggtgtgggaactgaagagaaagagggagagtcccagggtctgctgtttctgcgtcaggac
caagcccacatcgacctttttgtcttcttctctgttttcttctcctgctttttcctcttc
ctgtctgtctgcgtcctcctgtggaaggtgaaacagttcctggacttccgtcgggagcag
cgtcgccacattcaggagatgaccaagatggcgtcaagaccctttgctaaactcactata
taccttgagccggaggagcctcagctcatctacctgccttcagctggtggaggagtgggg
ggcagcactgtatcgcttgctcatgcccgcacgggcaagttaggaggagtagtggtgggc
cagaggggcagggcaggagctgtctcctacaaacatgacccaggctctggacccacagcc
caccaccaccatcacctcaccctgggtggagggggcaacagcggtcagcacctgccgctg
cactacctgaacacccaccactatgccagcaccaccgccggcactccagcctcacaccat
caccatccatccacgtacagcggctaccagcatttctgccgctccgaccccttcctctct
cagctcatgggtttttcctactcctcctttaaggtgggacccatcaccctagagcccaca
gatgatggcatggctggggtggccactgtcctcttccagctgcctgggggcgttttggct
ccaaatcgtgcctgcctgggctctgcactggttactttgcgtcagaacttgcaagaatac
tgcggccacggcaatggaggggggcacccaggggcgggagcagggcgcaaggggctgcta
gggcatcagcacctgaccactatggcgatgtag
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