Lates calcarifer (barramundi perch): 108880666 Help Entry 108880666         CDS       T04895                                  Symbol cicb Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism lcf  Lates calcarifer (barramundi perch) Brite KEGG Orthology (KO) [BR:lcf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:lcf03000]     108880666 (cicb) Transcription factors [BR:lcf03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     108880666 (cicb) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HTH_Cic_C DUF4819 HMG_box HMG_box_2 Zf_WRKY19 DUF3915 Motif Other DBs NCBI-GeneID:  108880666 NCBI-ProteinID:  XP_018527785 UniProt:  A0AAJ7PJC9 LinkDB All DBs Position LG15:complement(9398398..9434838) Genome browser AA seq 2752 aa AA seqDB search MRPIKKHRGRSPPLTRGRGGRRRGGSQPLQEKDPKRVKRETLVKTTQHTPNIPSTRKQSP PTATNSNEEPVTNSNSPTREESMEPRKPVESAERDGKKAEEKTEREKIVGTNGNSAMSVD TVAFPTSAPAPLSTAAPPPTTNHSPGLGSVSSRKTATFKARVPKKKYTYEHFANNASAPT TIPTSSPALIHNSYCNINSKISDNVNTPNNNFKTSNSISKSINVSLNSSTNNNTTSGINN MTNSSNSSAGSHSTFINSSNSRSNNCSGNQPSVLTMDSKATEANHFVSMEERALRTTDSQ EKESQAGENESEGAPNSVRSSSTDTASEHSADLDVMETTGPSLHQKNSHIPAPLHNLHRE EASLSELAEALAKGMKNQRVLARQIKRTVESGVGAAGDRGVKERDSCLLSPVFRPGVVRR VSGGIVEVQLQGEETLLKYPFHGGTVMTSSSGAESTVEFILDAPPPGMAPVALGTQVCVP FGGEEGGPLLYREGIVTQVDPHPGVSFPYQVLLSEDRGTLGDEGVAEEKEKRKANGQAVW VSRQSLRLLTPPWEVSHLDGGRAREREREREREERERREEMEVEREVCQLSIGMGVLGGG ARLGHGFAHEGVAGGHPYGNVHQPPLSSAVTSSAVVSTVHDCGENYSDRERQKQPNTPEE DVEVSRFNMGLTVGPKPSAGTSQQRNIISKSSGYPPSSPHLSIVRGLGPPHLSTLASPQP SPSPAVLRSEMNNSTPNLPPSKTTPTQTPTPTSGGGSSSTSSRSRTPLSLAQQKYKKGDV VCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEAAGGERGGGGGGS SSGTVTPSDLRGRASSEFEWDDTSRESSETSSRADSRPRLVLPSLLPHDLSSRFDFDECE AATMLVSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRH RQPSGTGGGGGGGSKATTPAGGAERERHTSGIQPSFHSNLTFTVPMSPSKRKPDAPPPPP LPSHHHDYTPKTELDQGDLNSFRVLSPQTPASHSRTHTPTFSRPRGVTTPSSSRPPSSTA VSPPPLLVSPTPPSPLTPDGGPRRVVPVSQQALRDSPVIVRNPEVPLAKFTECPLGRGGG GGGGGNEGGIDNTSSKDIGLTPLIPQPISGLQVPVPINAAAATVPNGTVLLRSPAQTLVL VSPTPSSLPTTDTPATPLQALSVTVSTTVTAPAPSSTDSSGEREENRGTGFGGEVQQPVP CHPSPTALLPLILPAESLHPVPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQS DASSQPGESQHPVNHPQAASLKTECQGVAALSQEPAEAPPTVERGPPSRPPPSSDEPPQE KEKGDAERERPDSETESDVDDPFLPGVVPEQPLSISPVKRRTQSLSALPKDGEKNSPGKR EKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGTKEKQKYHDLAFQ VKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSESTEPHSVELKGGVGPGLV SERSAGEGHVGQLTRPRAFSQSAMHNLERSDRGNTQALAELAQMCGDGGSQFSSHAPPLS QSQRGVSEDMTSDEERMVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSDHGSGDESD RKRVFAPVICSTASSASSHPTPHGRSVSLSSYPTSKRYDEGRSGGGGFSDHRRKERGEGE GKDTFGGEGGGGVQASSLSLSSGQSVISTSPAGGPPSSSVGSLGANPLLGIGAVRVASTV VTNVMRPVISTPLPIASKPRDGGTSSSPHPPERKSLTPLQQPQLLIGSGPGGGAAATGGG YYSSSSPNPVGGGVGPGGVVTNLVLGGALSAQPAVQLITPSPQSQPSHQQALPSTAVSAP HSQSNGPLPLPLLQPQFLPASSLAPPGGKAITQVQYILPTLPANTNPKSPPQQLSQPTSI FNLPTAPPAHVSLANGKQQATSSLTGYTSSPAVGVVSPGTRVQTQSPVLQGKMLVPMATV RTAPAPAQQFPIVAPPLPVQNGAQTGSKIIQIAPMPVVQSQLPQGGAVHPATPFPVTVGT AAVVAPGSAPSQAVLLPPAPTRITYVQSTPGVPSTLPLVSTTTGSSPTQQALPVPGSAYV PSPLATLGFTAIAPPGQTLVQPLIAGQPPLLATGQSPQPSTSSPASGSGGQIVTAIYPPS PSVTMATGVVSMTAVPPSVVYSVSSPSSTSPHILPKHTAAPATITHPHPDRQADRHLPPD RPADRQADRQAERQTELLTHSDRQLERQMQTSSSSSSVAPPSGSAVSIRPCSPPLQIQAP GSTPGTPKLTQLPVRTPQKVKATVANIPVGSYEGGGRGKEREREKDREREREREREREKE RERDREREAAANCHFSFDPEPAGQTASPSTHPAEEPPSSDRPLEGSSAADSSDTRTREST TAKETGWKESHPSSPLPPPSATEPALPPPQTDKDGPTPKKVKARPPPLKKTFDSVDKVLS EVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSATDDQVSPK RKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRAATDGEDILAELEFDKVPYSSLRRTLDQR RALVMQLFQEQGFFPSAQATAAFQTRYSDIFPTKVCLQLKIREVRQKIMQTAAPSDASGL GISDSAGSLPGPSGSQSGEGSGRGGGDLQDEEGEQGTEASPEDPRESQDSCR NT seq 8259 nt NT seq  +upstreamnt  +downstreamnt atgagaccaataaagaaacacagagggcgttctcctccattaactagaggcagagggggg agaaggagagggggctctcagcccctccaagagaaagaccccaaaagagtcaagagggag acactcgtcaaaaccacacagcacacacctaacattccctccacacgcaaacagagtccg cccacagccaccaactctaatgaggagccagtcacaaacagcaatagccccacgagggag gagtctatggagccaaggaaacctgtggagtcagccgagagagatggaaagaaggcagaa gaaaagacagaaagggagaagatagtgggcacgaatggaaatagtgctatgtccgtggat actgtagcatttcctacgtctgccccagcaccactctccacagccgcacctcctccgacc accaatcacagccctggtttaggctcagtctcgagtaggaaaacagccacatttaaggct cgtgtccccaagaagaaatacacatatgagcactttgctaacaatgcgagtgccccgact accattcctacctccagccctgcactcatacacaacagttactgcaatattaacagcaaa attagcgataatgtgaatacacccaataataatttcaagactagtaacagtattagtaaa agcattaatgttagcctcaatagtagtactaacaataacactacaagtggtattaataac atgactaacagtagtaacagtagtgctgggagccatagtacttttattaatagcagtaat agtagaagtaataattgctcaggtaatcagccatcagtgctaactatggatagtaaagct acagaagcaaaccattttgtctccatggaagaaagggccctcaggacaacagactcccag gaaaaagagtctcaagcgggtgaaaatgagtcagagggggcccctaactcggtgcgctcc tcatccactgatacagctagtgagcactcagctgacctggacgtgatggaaacaacagga ccaagccttcatcaaaaaaactcccacataccagctcctctccataacttgcaccgagaa gaggccagcctttcagagctagccgaagctctggctaaaggcatgaagaaccagagagtc ctggctcgccagataaagaggaccgtggagagtggagttggggctgcaggggacagaggg gttaaggagagagactcatgcctcctgtcacctgtgttcagaccaggcgtagtgcggagg gtgagtggaggtatcgttgaagtccagctccaaggagaggagactcttcttaaatacccc ttccatggtggaaccgtgatgacatcatcatcaggggctgagagcactgtggagttcatt ttggatgcccccccacctggcatggcacctgtggctcttgggacccaggtgtgtgtgcca tttggtggagaagaggggggtcctctgctgtacagagaggggattgtcactcaggtggac ccccaccctggtgtctcatttccttaccaggtgctcctgagtgaggacagagggactctg ggtgatgaaggggtggcagaggagaaagagaaaaggaaagctaatggtcaagctgtgtgg gtgtcccgacagagcctgagactgctcacccctccctgggaggtctcacatttggatggt gggagggcaagggagagagagcgggagagggaaagggaagagagggagcggagggaagag atggaggtagagagggaagtgtgccagctcagtattgggatgggggtgctgggaggggga gcaaggttgggccatggttttgcacacgaaggggttgcaggagggcatccctatggaaat gtacatcaaccccccctctcctccgctgtgacctccagtgcagtagtcagcacagttcat gactgtggagaaaactactctgacagagaaagacagaaacagccaaacactccagaagaa gacgttgaggtgtctcgttttaacatgggccttactgttggtcccaaaccgagtgctggg acctctcagcagcgaaacatcatctccaagtctagtggctaccctccctcctccccccac ctctctatagtacggggtctgggacctccacacctctccaccttggctagtccccagcca tccccttctcctgccgtactgaggtctgaaatgaacaactccactccaaacctacctcca tccaagaccactcccacccagacccctactcccacttctggcggggggtcctcctctacc tcctctcgctccaggactccgctctcattggctcagcaaaaatacaagaagggcgatgtg gtgtgcacccctaatggtatccgtaagaagtttaatggtaagcagtggaggaggctgtgc tctagggagggctgtatgaaggagtctcagcgtcgaggatactgctctagacacttatcc atgaggaccaaagagatggaggcagcagggggagagagaggaggaggaggaggaggcagc agctcagggacagtcaccccctctgacctgcgaggcagagccagtagtgagtttgagtgg gacgacacatcaagagagagcagtgagaccagtagcagagcagactccagaccccgcctg gtcctcccctccctcctcccccatgacctgtcctcacgctttgacttcgatgagtgtgag gctgccaccatgcttgtatcattagggagctcccgctctggcaccccctccttttctccc atctccaaccagtcgcccttctcccctgccccctctccctcgccctccccgctgttcggc ttccggccggccaacttctccccgattaccgcctccccggttctgcaacaccggaggcac aggcagcccagtggtacggggggaggagggggagggggcagtaaagcaacaaccccagct ggaggagcagaaagggagagacacacttcaggcatccagccctccttccacagcaacctg acttttacagtccccatgagccccagcaaacgaaagccagatgcacctcctccaccaccc cttccctcacaccaccacgattacacgcccaagacagagctggaccagggggacctcaac tctttcagggtgctgtccccccaaacaccagcttcacattcccgcacacacacacccacc ttctcccgacccagaggagtgaccaccccctcctccagtaggcccccgtcctctactgct gtctcccctcctcctctgctggtgtctccaactcctccttctcctctcactcccgatgga gggcctcgtcgtgtggtccccgtatcccaacaagccttgcgggactcccctgtcattgtg aggaatcccgaagtcccactggcaaaatttacagaatgtcccttgggaagaggtggagga gggggaggaggtggaaatgagggagggatagataacacttcatctaaagacattggccta acaccccttatccctcagcccatttctggcctccaggttcccgtccccattaacgctgct gcagccacagtacccaatggcaccgtccttttgcgtagcccagcccaaactctggtgctt gtgtccccgacaccttcctccctgcccaccactgacacccctgccacccccctgcaggcc ctgtcagttactgtcagcacgacggtcacagctcccgctccaagcagcacggacagctca ggggaacgagaggagaacagggggacggggtttgggggtgaggtccagcagccagttccc tgtcacccttctcccactgcactgctgcccttgatcctgcctgcagaaagccttcacccc gtcccacgaaaggacatcatcatgggacgtcctggcacagtgtggaccaacgtagagccc cggtcagttccagtcttcccctggcattcgttggtccctttcctggcaccaacccaatca gatgcttcttctcagccaggggagagccagcacccagtcaaccacccccaagcagccagt ctgaagacagagtgtcagggggtggcagcgctgtcacaggagcctgcagaggcacctccc actgtagaaagaggtcccccatcccggcctcccccctcctccgacgagccgcctcaagag aaggagaaaggagatgcagagagggagaggcctgatagcgagacagagagtgatgtggat gaccccttccttccaggggttgtaccagagcagcccctctctatatcaccagtaaagagg cgcactcagtccctcagtgcactgcccaaagatggagagaagaacagccctggaaagagg gagaaggaccacatccggcgaccgatgaatgcgtttatgatattcagtaagcgccatcga gcgttggtgcaccagcggcacccaaaccaggacaacaggacagtgagcaagattcttggg gaatggtggtatgctctgggaaccaaggagaaacaaaaataccatgatttggccttccag gtaaaagaggcccactttaaggcgcacccagactggaagtggtgcaacaaagacaggaag aagtccagctctgaaggccgtggggtgccagggggcaaagacatcagagagaggagcatg tctgagtccacagagcctcattctgtggagctgaaggggggggttggtccaggtctagtg tctgagaggagtgcaggggaaggtcatgtgggccagcttacccgtccccgagccttctct caaagtgccatgcacaacctggagcggagtgacaggggtaacacacaggccctagcagaa ctggcacagatgtgtggggatggtggcagccagttttcgagccatgccccacccctgtcg cagtcccagcggggcgtcagtgaggacatgaccagtgacgaggagcgcatggtcatctgt gaggaggagggagatgatgatgtcattgaggacccctatcctagcagttccatagacctc aagtgtaaggagcgggtgactgacagtgacagtgatcacggttctggagatgaaagcgat cggaagagagtatttgctccagtcatctgctccactgcatcatccgcttcctcacaccct acccctcatggcaggagtgtctccctgtcctcttaccccaccagtaagcgctatgatgag gggagatcaggagggggagggttttcagatcacaggaggaaggaaagaggagagggagag ggtaaggacacgttcgggggagagggaggaggaggagtgcaagcctcttctctctccctc tcttctggtcagtcagtcatttccacctctccagctggaggacctccatcctcgtcagtg ggttcactgggtgcgaacccactcctgggcattggcgctgtgagagtggcctctacggtg gtgaccaatgtaatgcgtcctgtcatcagcacaccactccccattgccagcaaacctaga gatggaggcacttcatccagcccacatccgccagagagaaagtccctgactcccctgcag cagccacaacttctcatcggttcaggaccaggaggcggggccgcagccacagggggtggg tactactcttcttcgtcacctaatcctgtaggtggaggcgtgggcccaggtggtgtagtg actaatttggtgttaggaggggccctgtctgctcaacctgctgtacagctcatcaccccc tccccccagtctcagccctcccatcagcaggcccttccctccaccgctgtttcagctcca catagccaaagcaatgggcccctgcctctgcccctgcttcagccccagttccttcctgct tcctcccttgcaccccccgggggtaaggctatcacacaagttcagtacatcctgcccaca ctacctgccaacaccaaccccaagagtccacctcagcagctcagccagccaaccagtatc ttcaacctgcccacagctccacctgcacacgtatccttggccaatggaaagcagcaggct acaagttcactgacaggatatacgtccagcccggcagtgggagtggtcagcccgggaact agagtgcaaacacagtctccggtgctccagggtaaaatgcttgttcccatggcaacagtg cggactgcgccagcccctgcccagcagtttcccattgtggctccacctcttcctgtccag aacggtgctcagaccggaagcaagatcattcagattgcgcctatgcctgtggttcagtcc cagctgcctcagggcggagcagtgcaccctgccacccccttccctgtcacagtgggcaca gctgctgtggtggctccaggatcagccccctcccaggctgtactgctgccaccggcacct accaggatcacctatgtccagtccactccaggggtcccatccactctgcctctggtctcc acgacaacaggctcttcccccacccagcaagctctgccagtgcctggatctgcatatgtt ccctcgcccctagcaacactcgggtttacagccatcgcaccacctggacagacactggtt cagccactgattgcaggccaaccgccactcctagccacaggtcagtctccacagccctcc acctcttcccctgcctcaggctccgggggccagatagtcaccgccatctaccctccttca cctagcgtcaccatggcaacaggggtggtctccatgacagcagtgccccccagcgtggtg tactcggtctccagcccttccagcacttcccctcacatcctgcccaaacacacggcagca cctgccacaatcacacacccacatccagacagacaggcagacaggcacctacccccagac agacctgcagatcgacaggctgacaggcaggccgagaggcagacagagctgctgacgcat tcggacagacagcttgagaggcaaatgcagacctccagcagtagcagctcagtggcacct cccagtggctcagctgtgtccataaggccctgcagtcctccacttcaaatccaagcacct ggtagcacgccaggtactcccaaactaacccagcttccagtcaggacccctcagaaagtg aaggcgacggtggcaaacattcccgtgggcagctatgaaggaggaggaagaggaaaagag agagagcgggagaaggacagggagcgagagcgagagagggagagagagcgggaaaaggag agagagagggacagggagagggaagctgcagccaactgtcacttctcctttgatcctgag ccagcgggacagacagcgtctccatcaacacatcctgccgaggagccgccatcctctgac agacccctggagggctccagtgcagcggactcatctgacacacggaccagggaaagcaca actgccaaagagactggatggaaggagtcccacccctcctctcctctccctcctccatca gccacagagcctgccctgccacccccacagaccgacaaagacggcccaacacccaaaaag gtcaaagcccgcccaccacctttaaagaagacttttgactctgtggacaaggtgctgtca gaggtgtatttcgaggagcgctttgccgagctgccggagtttcggcctgaggaggttttg ccttcacccaccctgcagagtctggccacttcaccccgcgccatcctgggcagctatcgc cgcaagaggaagaactctacagatttggactcagccactgacgatcaagtctctcctaaa agaaagagccggcggcgctcaagctgcagctcagagcccaacacgcctaaaagtgccgcc aagtgtgagggagacatcttcacctttgacagagcagccacagatggagaagacatcctg gcagagctggagtttgataaggtgccgtactcctccctgcgacgaacgctggaccagagg agagcactcgtcatgcagctgttccaggagcagggcttctttccatcagctcaggccact gcagccttccagacgagatactctgacatattccccaccaaggtgtgtttacagctgaag atcagggaggtgcggcagaaaatcatgcagacagctgccccctctgatgcctctggttta ggcatctctgactcggccggctccctccctggaccctctggttcccagtcaggagaagga tctgggagaggaggcggggacctgcaggatgaagaaggggagcaagggacagaggctagc ccagaggatcctcgtgaatcgcaggactcttgcagatga

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