Lates calcarifer (barramundi perch): 108880675
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Entry
108880675 CDS
T04895
Symbol
tlr21
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108880675 (tlr21)
Pattern recognition receptors [BR:
lcf04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
108880675 (tlr21)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
108880675
NCBI-ProteinID:
XP_018527812
UniProt:
A0A4W6BPX6
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Position
LG15:9159561..9164037
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AA seq
977 aa
AA seq
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MGGLIHQLLSVTALLAAVQLISGYSFDNCIEDPYSNATCFNCVNRKKKNMSTIIHDLPPS
VINLTISMNEVGCIPNDSFVHLQELQYLRLDQNHLVTIDQFAFRTLHQLQSLNLSVNSIT
ELNPSLFQDLHNLTFFSLANNKLKQLPLGIFSATPKLNTLIMRQNLLTNFSGIAESVSHL
LNLRILDLCYNNLASLSHSNVSLPKSLTTLYICRNNLSTLGCEHSFLGFLKVLDLSDNFR
LPTMAFQGVDLRHINYLRLRSTSVKVVAFLNISNVKAGAVDFSGTGLKNDSLLMELCKLL
KKKVRWIKNLHLGMNGIEKLTNYTLYYCPKIKGALDLSRSELKSIGCLNFLNRQTDIRSF
NAEHNHLTSLQSCKTQNMVLLNLEELSYRYNRILSVGPHAFCHIPNVRTLKLNINSIAYL
DQEALKGLKRLETLRLDNNLLTDLFPETFEENSRLQNLNLRNNRVSVIFNKTFHSLSNLS
VLDLGGNKITHIEPLGLDGLKNLSKLYLDGNNLKQIDSSHYHVFQDTLTVLDLQSNKISF
LTENMESPFMNLSKLSDLKLDGQRPHGMTILPRTLFRGLYSLKFLYLTNNKIFYLAPDTF
DDLTGLRFLTLDTCCVGVTQLQPGVFKNLRNLTALAAENMGIQNFSKEVFGNLTQLRKLQ
LNRNALQSMDVDALQSLPKLLYLDIRSLPLSCTCQNSLLQNWTRNNQNVQVVYLYNLPCQ
HNAKSNFYNFDTKVCYIDLGEYLFFSTAVVIFLFTVTPLLYVKLYWKLKYSYYVFRSWFS
EQWRRLREEEENCKYDAFISYNSSDEQWVMDQLVPNMEGNASFKLCLHHRDFELGRDIVD
NIVSAVYSSRKTICVVSRNFLQSEWCSLEIQLASYRLFDEHRDVLLLVFLEPISERQLSS
YHRMRKVMLKKTYLQWPGSDCTDPVQAQELFWNQLHRAMRTGTRVIEGNVISKDCVTTKS
EETEHFETSDENYYLLP
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtctaattcatcagttgttgtcagttacagctcttcttgctgccgttcaactc
atcagtggttacagctttgacaactgcattgaagacccgtactcaaatgcaacatgtttc
aactgcgtcaatcgaaagaaaaagaacatgtctaccattatacatgacctgccgccatct
gtcatcaatctcactatctccatgaatgaggtggggtgcattcccaacgacagctttgtt
catctacaagagcttcaatacctcagacttgaccaaaaccacttagtgaccatcgatcaa
tttgctttcagaacgttgcatcaacttcagtctctaaatttgtctgttaacagcataaca
gagctcaacccttctctgtttcaggaccttcacaacctcacctttttctcactggcaaac
aataaattaaagcagcttcctttgggcattttctctgccactcccaaactaaacacctta
atcatgaggcaaaaccttctgacaaatttctcagggatcgctgagtctgtgtcacatcta
ttgaatttgaggatactagacctttgctataacaatttggcctcccttagtcactcaaat
gtgtcgctacccaaatccctcactactttatatatatgtagaaataatctgtctacatta
ggatgcgaacattcatttcttggattcctcaaggtgcttgatttgtcagacaattttagg
ctccctacgatggcttttcaaggagtggatttgagacatataaactatctgcgtttgcgt
tcgacaagtgtcaaggtcgtggcgtttttaaacataagcaatgtcaaagcaggtgctgtt
gatttctctggcacgggtctaaaaaacgacagcctgctaatggagctatgcaaattgtta
aaaaaaaaggtgagatggattaaaaatttgcacctgggtatgaacgggattgagaaactg
acaaactacacactgtactattgtcctaaaatcaaaggggctctggatctatcccgcagt
gaactgaaaagcataggttgtcttaactttctcaatagacagacagatataagaagcttc
aatgcagaacataaccatctcacctccctccaatcctgtaaaacacaaaatatggtttta
ctaaatctggaagagctgtcctatcgttacaaccgcatcctctcagtgggtcctcatgct
ttttgtcatataccaaatgtcaggacactaaaacttaacataaactcaatagcctatctt
gatcaagaagctctcaaagggctaaaaaggcttgagacactccggttggacaataacctc
ttgactgatttgttccctgaaacctttgaagaaaattctagactgcaaaaccttaaccta
cgcaacaatcgtgtttctgtcattttcaataagaccttccacagtcttagcaatctgagt
gtattggacctcggaggtaataagatcactcacattgagccattaggccttgatggacta
aaaaatctgtccaaactctatctagatggaaacaacctcaaacagatcgacagttcccac
tatcatgtatttcaagatacactcacagtgctggatttacaaagtaataagattagcttc
ttaactgaaaatatggagtcaccatttatgaatctcagcaaactcagtgatctgaaattg
gatggacaacggcctcatggcatgaccattttaccccgcactcttttccgtggcctctac
tcactgaaatttctgtatctcaccaacaataaaatcttttatcttgctcctgatacattt
gacgatctgacaggcttgcgtttcctcaccctggatacctgttgtgttggggtgacacaa
ctacaaccaggagtctttaagaatctaagaaatttgaccgcattggctgcagaaaatatg
ggcattcagaacttctcaaaggaggtttttgggaatcttacacagttaagaaaactgcag
ctcaaccgcaatgcgctgcaaagcatggatgtagatgcactacaaagtttacctaaactc
ctctaccttgacatacgtagtcttcctctaagctgcacctgccagaacagcttgctgcaa
aactggacacgaaataaccaaaatgtccaggtagtctacctctacaatctgccatgccaa
cataatgcaaaatcaaacttctacaactttgataccaaggtttgttacatagatctaggg
gagtacctgttctttagcactgcggttgtgatcttcctgttcacagtcactcctttactt
tatgtcaaactctattggaaattgaagtacagctactatgtgttccgttcttggtttagt
gagcagtggcgcagactcagagaagaggaggaaaactgcaaatatgatgcatttatttcc
tacaactcctctgatgaacagtgggtcatggaccagttggtgcccaacatggagggaaat
gcgtcttttaaactttgtctacatcacagggactttgaactgggccgtgatattgtggac
aacattgtctctgctgtgtacagcagccgtaaaactatctgtgtggtaagcaggaatttc
cttcaaagtgagtggtgttctctggagatccagctcgccagctaccggctcttcgatgag
cacagagatgttcttctgcttgtgtttctggagcctatctctgagaggcaactgtcatcc
tatcaccgcatgaggaaagtcatgttaaaaaagacttatctgcagtggcctggctcagac
tgcactgacccagtgcaggcccaagaactgttttggaatcagctacatagggcaatgaga
actgggaccagagtcattgaaggaaatgtcataagtaaagactgtgttactaccaaaagt
gaagaaactgaacatttcgagacatcagatgaaaactattacttgctaccataa
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