Lates calcarifer (barramundi perch): 108880689
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Entry
108880689 CDS
T04895
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5 isoform X1
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108880689
04147 Exosome [BR:
lcf04147
]
108880689
04090 CD molecules [BR:
lcf04090
]
108880689
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108880689
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108880689
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108880689
Exosomal proteins of bladder cancer cells
108880689
CD molecules [BR:
lcf04090
]
Proteins
108880689
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Antigens
108880689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_5
V-set_CD47
BiPBP_C
Ig_6
C2-set_2
Extensin-like_C
Vault_2
CD99L2
Glyco_hydro_42C
Motif
Other DBs
NCBI-GeneID:
108880689
NCBI-ProteinID:
XP_018527839
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All DBs
Position
LG15:9203474..9223735
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AA seq
546 aa
AA seq
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METAVIYVVILGVISGLTSGAGVLPADSLNAAVGGTVMFTTTLTPPETQFVSVAWTFGVN
DIITSTTASNTTGPEYEGRITLFRSTGSLEFRNLALSDSGEYRVSIIPAVGGSLSGHTRL
DVYVPVSNVRVTANSSDLIEFNSSVSLSCSSSGSSLSFLWLNSSSEVTASDRVQLTDGGA
ILTIISVTRYDQGPFRCRVFNPVSDVTSEPVNLSISFGPDNTNLKRSPSQQYYMEGSNII
LSCSAVSRPAAQFQWFLNGDLLTARGPELRLMNIQMSQSGNYSCQAFNNITMRTQTSQTS
VVSVLERISGASVKSSTNQPVDGNSVNLTCEAAGSVFTRQWMKDGSDLILTDNMMLYNEG
RVLSFQPLKKKDSGEYSCKISNPVSSDEAKYVMVVNYGPENVKITGETVIYLQETLKLTC
SAESTPSASYTWMWNKTEIISYSAELTKVITELSESGNYTCRAMNSITSRTSSAVHELTV
KAERPSSCSAGCIAGIVIACLVVVGAVAGGVYYYNKKKVNKNPKLHKARQDTTMQGSISI
QRSFSL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagctgtgatatatgtcgtcatcctgggagtcatctcaggtttaaccagtggg
gctggtgtgttaccagctgattctctgaatgcagctgtgggaggcactgtgatgttcacc
acaacattgactccaccagaaactcagtttgtgtcagtggcctggacctttggtgttaac
gatataataacctcaaccacagcttcaaacacaactggaccagagtatgaaggcaggatc
accctcttcagatctactggatctctggagttcaggaatttagctctcagtgacagtgga
gaatacagagttagtattataccagctgttggaggaagtctgtcaggacacaccagactg
gatgtatatgtgccagtctccaatgtaagagtgactgccaacagctcagacttgatagag
ttcaacagctctgtcagcctgtcctgctcctcctctggatcctccctctctttcctctgg
ctgaacagcagctctgaggttacagccagtgacagagttcagctcactgatggaggggcc
atcctcactataatcagtgtgacccgctatgaccagggaccatttaggtgtcgtgttttc
aatcctgtcagtgatgtcaccagtgaaccagtaaacctctccatcagctttggtccagat
aatacaaatttgaagcggtctccatcacaacaatactatatggaagggtcaaacatcatc
ctgtcctgctcagctgtctccagacctgctgcccagtttcagtggtttctgaacggagac
ttgctgactgctagaggaccagagctcagactgatgaacattcagatgagtcagagtggg
aactacagctgtcaggcctttaacaacataactatgagaactcagacatctcaaacttct
gttgtctctgtactggagagaatatcaggagcttctgtcaaatcatcaacaaaccagcca
gttgatggaaactcagtcaacttaacctgtgaggctgctggctctgtcttcaccagacag
tggatgaaggatggctcagatctgatcctgactgacaacatgatgctttacaatgagggc
agagtgttgtcttttcaacctctgaagaaaaaagacagtggagaatattcctgtaaaatc
agcaaccctgtcagcagtgatgaagctaaatacgtcatggttgttaattatggaccagaa
aatgttaaaatcacaggtgaaactgtgatatatttgcaagagaccttaaaattaacctgc
tctgctgagtccacaccatctgctagttacacctggatgtggaataagacagagataata
agctattctgctgagctcactaaagtcatcactgaactttctgagagtggaaactacacc
tgccgagcgatgaatagtataactagcagaacatcatctgcagtacatgaactgactgta
aaagctgaaagaccttcaagttgctcggccggttgcattgctggaatagtaatcgcttgt
cttgttgttgttggagctgttgctggtggagtctactattataataaaaaaaaagttaac
aaaaatcccaagctacataaagcaagacaagacactactatgcaaggcagcatttcaatt
caacgatctttctctttatga
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