Lates calcarifer (barramundi perch): 108880729
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Entry
108880729 CDS
T04895
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108880729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108880729
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108880729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
RMD1-3
CFAP70_mid_TPR
TPR_20
CFAP70_TPR_C
TPR_Slam
ANAPC3
TPR_9
TPR_10
PEX18_PEX21_C
CABIN1_N
Secretin_N_2
MAS20
CNOT10_TPR
Motif
Other DBs
NCBI-GeneID:
108880729
NCBI-ProteinID:
XP_018527921
UniProt:
A0A4W6CEG7
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Position
LG15:complement(9980365..9991039)
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AA seq
642 aa
AA seq
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MAMRELVEAECGGANPLMKLTSHMTKEGGAWRHRSTPTIPPTPIEIATEEELVNEFLQAP
PRPPHTFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWAAEFLSGSDSASTPGLI
TLGDAADADWTREFIAEAADPGRWAEEYLEQSEEKLWLGDLGDKENEWTKEYQPGEELRQ
TANELVSKVEDPKLQNTEFLRFIRQIGEGSVTVESSTDRQLTDKAQAEEAQNWASNLNQV
SEESAEAWVDEFATSGPDFQQAKAAVESDVDFWEKLQQEWEEMAKRDAESHPWLSDFDQL
LSTSYDKGYQFEEDNPYLSHPDPLSEGVKRMEAGDIPGAVRFFESAVQREPDNQLAWQYL
GTCQAENEQEFAAISALRRCIELKNDNLTALMALAVSFTNESLHRQACETLRDWLKHNPK
YRSVWEQNERERQKDGARDREKERERFGSLLPESLFSDVQSLFLRAANSDPAQVDPQLQC
GLGVLFNLSGEYDKAVDCFSAALSVTPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQ
PGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQAAGDGARAARGPGGAAATMMSDNI
WSTLRMALSMMGESSLYAAADRRDLDTLLAHFCQREVDGGTE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagttggtagaggcagaatgtgggggagccaatcccctcatgaagctg
accagtcacatgaccaaggaagggggggcatggcggcaccgttcaacacctacaattccc
cccactcccattgaaattgcaactgaagaagagctggtgaatgagttccttcaggcgccc
ccacgacccccacacacatttgacatgggtcagctgctggaggaaatgcagcagatcgac
cagcaaagctacagacaagctccacagagagctccagatgtggcagcgttggcgctctcc
ggtgactgggcagccgagttcctctcaggttctgactctgcctccacaccggggctcatc
actcttggcgatgcagcagatgctgattggacgagggagtttatcgctgaggctgcagat
cctggacgctgggcagaggagtatctggagcagtcggaggagaagttgtggcttggagac
ttgggagacaaggagaatgaatggacaaaagagtatcaaccaggagaggagctgaggcag
acagccaatgagcttgtctcaaaggtcgaagaccccaagttacaaaatacagagttcctg
cgattcattaggcagattggcgagggcagtgtcacagtggagagcagtacagacagacag
ctcacagataaagctcaggccgaggaggctcagaactgggcctccaacctcaaccaggtg
tcagaggagtcggctgaagcctgggttgacgagtttgccacatcaggaccagacttccaa
caagccaaagctgcagtggagagtgatgtggatttctgggagaagctacagcaggagtgg
gaggagatggctaagagggatgcagagagccatccctggctgtctgacttcgatcagcta
ctcagcacttcttatgacaaggggtatcaatttgaagaggacaacccctacttatctcac
ccagaccctttgtcagaaggagtaaagaggatggaggcaggggacatccctggtgctgta
cggttctttgaaagtgctgtacagagagaaccagacaaccagctggcttggcagtatctg
ggaacctgtcaggcagaaaacgagcaagaatttgctgccatcagcgccctccgcagatgt
atagagctgaagaacgacaacctgactgctctgatggcgctggctgtcagtttcactaat
gagtcactgcacaggcaggcctgtgagactcttcgtgattggctgaagcacaatccaaaa
taccgctctgtttgggagcagaatgagcgcgaacgccaaaaagatggtgccagagatagg
gagaaggagagggagaggttcgggtcactcctgccagaatctttgttttctgacgtccag
tccctgttcctgcgtgcagccaactctgacccggcccaggtggacccccaactgcagtgt
ggtctgggagttctcttcaacctcagtggagagtatgacaaggcggtggactgtttcagt
gccgctctctctgtcacgccacaggactacctgctgtggaataagttgggtgctactctg
gccaatggaagccgctcagaggaggcagtggcggcctacaggagagccctggagctgcag
cccggtttcgtccgcagtcgctacaacttggggatcagctgtgtcaacttaggagcacac
agagaagcggtggagcatttcctcgaagctctgtctctacaacgccaagcggctggggat
ggggccagagctgcaagagggcccggaggtgctgcagcaaccatgatgtctgacaacatc
tggtccaccctgcgcatggctctcagcatgatgggagagagctctctgtatgctgctgct
gatcgccgggacttggacacattgctggctcacttctgccagagagaggtggatggtggg
actgaatga
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