KEGG   Lates calcarifer (barramundi perch): 108880800
Entry
108880800         CDS       T04895                                 
Name
(RefSeq) WD repeat domain-containing protein 83
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108880800
Spliceosome [BR:lcf03041]
 Complex C
  Other components
   Complex C specific factors
    108880800
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_ACSF4 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_Aladin NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WD40_like Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_HPS5 PQQ_2 Beta-prop_WDR35_2nd Beta-prop_Nup120_160 RCC1_2 Beta-prop_IFT80_2nd Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 108880800
NCBI-ProteinID: XP_018528027
UniProt: A0AAJ7LNC5
LinkDB
Position
LG5:complement(2866416..2869845)
AA seq 317 aa
MAFPQPRPQAPQLPQHLLRTIDCQQGAVRAVRFNADGNYLLSCGSDKSLKLWSVSRGTLL
KTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVGTGQVTRKLRGHAGKVNCVQFNEE
ATVILSGSIDGTVRCWDTRSRRFEPIQVLDEARDSISSVKVAQHELLTGSVDGRVRRYDL
RMGQLHVDFISSPITCVCFSQDGQCTLSSSLDSTVRLLDKSTGEMLGEYTGHKMKGYKLD
CCLSSKDTHVLSCSEDGHVYCWDLVEGSLSLKLPVGKAVVQSLSFHPTETCLLTAMEGRV
QVWGTEPEETEEDTMAT
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcgtttcctcagcccagacctcaggctcctcagcttcctcagcatctgctcaggacc
atagactgtcagcaaggagctgtcagggctgttcgcttcaacgctgatgggaactacctg
ctgtcctgtggcagtgacaaatctctaaagctgtggagtgtgagcagagggaccctgctg
aagacatacagtggacacggatacgaggttctggatgctgatggttcctatgacaacagc
cagctttgctcctgcagctctgacaagacagtgatcctgtgggacgtcggcacaggccag
gtcacacgcaaactcagaggccatgcagggaaagtcaactgtgtccagttcaacgaggag
gcaactgttatcttatctgggtccatagatgggacagttaggtgctgggacaccaggtcc
agaagatttgagcccatccaggttctagatgaggctcgggacagcatcagcagcgtgaag
gtcgcacaacatgagctgcttactggatcggtggacggcagagtgaggcgctatgacctg
agaatgggacagctgcatgtggacttcattagcagtcccatcacctgtgtgtgtttcagt
caggatggtcagtgcaccttgagctccagtttggattcaacagtcagactactggataag
agcacaggagaaatgctaggagagtatacaggacataagatgaagggctacaagttggac
tgctgtctgtccagtaaagacacgcatgtcctgagctgctcagaggacggacatgtctac
tgctgggacctggtggaggggtctttgtccttgaaattgccagtgggaaaagctgttgtc
cagtcgctgtccttccatcccacagagacctgccttctcactgccatggaggggcgtgtc
caggtgtgggggacagagccagaggagacagaagaggatacgatggccacatag

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