Lates calcarifer (barramundi perch): 108880900
Help
Entry
108880900 CDS
T04895
Symbol
tulp4a
Name
(RefSeq) LOW QUALITY PROTEIN: tubby-related protein 4a
KO
K24720
tubby-related protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108880900 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Tubby family proteins
108880900 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
108880900
NCBI-ProteinID:
XP_018528134
UniProt:
A0AAJ7LNK4
LinkDB
All DBs
Position
LG7_1:9744406..9773285
Genome browser
AA seq
1799 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRPTPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYSPP
QVHSQKPLLTVSFTSGDISLMSNYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERTLL
SPDSPVLPSARNAIVKFYNVQGEHIYTLDTPAQRPITTLCWGHRDSRLFLACGPALYVVR
VEHRVASLQLLCQQGIATAVKEEKDVAKLTMPSRLCSYVTAAFIPTIKPPIPDPNNMRDF
VSYPTAGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDP
KTDGKTDEIYGNSLISAMIDSCNCSDSSDIELSDDWVGKKSPKISRGSKSPKLPRINIDP
RKSPKLSRATQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQQNYLAQVTSNIWGTKFK
IVGLATFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFSPNVFSEDEDD
LPVTGPAGGADDNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNVQLDVLTNPTA
TPAGAAASGSDQSQDTILTAQYTVPTRYSSPGQVIFGGLEMGRLMVGPPPSHHPSQQQPN
HHQQQQQQQQQQQQQQHQQQLQQHHQQIQHHQQQLQQQQQQQQLQQQQQQMLQHQHLQQQ
QLQQQHIQQQLQHMQQQQQQQQLQQHIQQQQQLQQQHQQIQQQLQQQQQQMHHQQQSQQQ
QQMQQQQHHHQLQQQLQIQIPVPSMSSGQPSGAAVHQLQPGALQIQIPQPPADLVVERAV
GGEHEHLLKIKTTRSTPQLAEGDTVVFSAPLELSKMNPPPPYPGTVAAAVAAAAAAAASA
TASTAASNAASGAGGGTSGTPPPSDLCMKKGEFYPLGQQQAQYPTPLGYERITTFDSSGN
VEEVCRPRTRLVCNQNVYTLQGPGSSATLRVTSSSSSSSADKKIQLPYTSATLNRLTAPR
YSIPSGDPPPYPDTANQNSTVGRNPGQRLDSSLIHATLRRNSREAALKVSQMLEPPRPLP
PKAKNSALAASFQQRVPTALYTCSQCSSGSSVGGTAPGSANGIAGGTIIRQDFPPRNGAP
HSTVIVHSNSATPLTSQSSYNLLSSLEGSGNAAGGGSNRDRAEYVNSAFTEDETLNQTLR
HLALGGNDASGLVVKRPPPYQWDPAATEEVWVPQERTATLNPTGPPGPHKPPPLILSPAQ
HLDVSRLPFVLSPKSPTSPSAASFQAAAAAAGYQISLQYPPATAYSGAQLQPIPGSPRPC
SSPKEVVAPVPLSQQDATLVLPPGYPANLANLACCPLPPMYPGGSACSGLPIPPIALHTP
WGTYNSCPPMPSPAVPLPPKASHMAVDKNVLSPPPPPPPPPPPPPAELQSHGGLQEAMAE
AGEGFQEVLSLTESPVPQRSEKFSKKNRKRADGRADEANVPPLAEGSKSKKEGRALGDFN
SLISSPRLGGRDKKKLKGQKEQQLKAKKLSKATANSEFQDSSESEPELFISGDELLNQCQ
SSKKGWKSKRNLRAASELDEIKCRKANEKEDRGLGSQGFVYVMANKQPLWNEATQVYQLD
FGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgccgtggagcatggcccggtcctttgcagcgactccaacatcctgtgcctg
tcctggaagggccgagtgcccaagagcgagaaggagaagccggtgtgcaggaaacgctac
tacgaggagggctggctcgctaccgggaacggccgaggagttgtcggggtcacgttcaca
tccagccactgtagacgggaccggcccactccgcagagagttaacttcaacctcagagga
cacaacagcgaggtggtgctggtgcggtggaatgagccctttcagaaactggctacctgt
gatacagatgggggaatctttgtttggatccagtacgagggccgctggtcagtggagctg
gtcaatgaccgaggagctcaggtgagtgacttcacctggtcccatgatggcacccaagcc
ctcatctcctaccgtgatggctttgtcctggtgggatcagtcagcgggcagagacactgg
tcctctgagatcaacctggaaagccagatcacctgtggtatctggactcccgatgaccag
caggtgttgtttggtactgcagatggacaggtgatagtgatggactgccacgggcgcatg
ctggcccacatactgctacatgaatcggatggcattgtcagcatgtcctggaactacccc
agcttcctggtggaggacagcagtgagagcgacacggactctgacgactactccccacca
caagtgcacagccagaagccactgctgacagtcagcttcacctctggtgacatcagcctg
atgagcaactacgatgacctctctcccaccctcatccgcaccggtctgaaagatgtggtg
gtccagtggtgctcacagggggacctccttgcagtggcagggatggagagaacactcctc
tcccctgactcacctgtcctcccctctgccaggaatgccattgtcaagttctacaacgtt
cagggtgaacacatctacacactggacactccagcacagcgcccgatcactacgctgtgc
tggggtcaccgggactctcgtctgttcttggcatgcggtccagcgctttatgtcgtacga
gtcgagcaccgtgtcgccagcctgcagctactctgccagcagggcattgccacagcagtg
aaggaggaaaaagatgttgccaagctcaccatgccctcccgcctctgttcttacgtcact
gctgctttcatccccaccatcaagccccccatcccagatcccaacaacatgcgtgatttt
gtgagctacccgacagctgggaatgagcgtctgcactgtaccatgaagcgtacagaagat
aaccctgaggtgggggggccctgctacactttgtacttggagtacctaggaggactagtg
cctatcctcaagggcaggcgaataagcaaactacgtccggagtttgtcattatggacccc
aagacagacgggaaaacagatgagatatatggcaacagtctgatatctgccatgatcgac
agctgtaactgctcagactccagtgacattgagctgagtgatgactgggtgggcaagaag
tctccaaagatatccaggggcagcaaatcccccaaattacccaggatcaacattgatccc
agaaaatcgcccaaactgtcccgtgctacgcaggagatctccagatcaccacggttaccc
atacggaaaccctcaattgggtcacccagtctaacacggagggaatttcctctagatgac
atcactcagcaaaattaccttgctcaggttacatccaatatttggggaacaaagttcaag
atagtgggtttggcaacattcttgcctaccaatcttggtgcagtcatctacaagacaagc
ctcctccatctgcagccgagacagatgaccatctacctgccagaggtgcgtaagatctcc
atggactacattaatctgcctgtcttcagccccaacgtcttcagtgaggatgaagatgac
ctgcctgtcacaggccctgctggtggcgccgatgacaaccctccctgcactgtcaacatc
cctattgcccccatccatagtcccgcccaggccatgtcccccgctcaaagcattggtctg
gtccaatcactcttagccaatcaaaacgttcagctggacgtcctaacaaatcctacagca
acgccagcaggagcagcagccagtgggtcagatcaaagtcaggacactatcctgacagcc
cagtacacagttcccaccaggtattctagtcctggtcaggtcatctttggcgggctggaa
atgggtcgcctaatggtgggacctccaccttctcatcatccatcgcaacaacaaccaaat
caccatcaacagcagcagcagcagcagcagcaacaacaacaacaacagcaccaacaacaa
ctacagcaacatcaccaacaaattcagcaccaccaacaacagcttcagcagcagcagcag
cagcagcaactccaacagcagcagcagcagatgctccagcaccaacacttacaacagcag
cagctccagcagcagcacatccagcagcagcttcaacacatgcagcagcaacagcagcaa
cagcaactccagcagcacatacagcaacagcagcaacttcaacagcagcatcaacaaatt
cagcagcaactgcagcaacagcagcaacaaatgcatcatcaacagcaatcacagcagcag
caacagatgcaacaacagcagcatcaccatcaacttcagcagcagcttcagattcaaatc
cctgttccctccatgtcatcaggacagccctcaggtgcagctgtgcatcagctccagccg
ggggcgctgcagatccagatccctcaaccacctgcagatttagtggttgagagagcagtg
ggaggtgaacatgagcacctactgaaaatcaaaaccactcggtcaactccacagctggca
gagggcgatacagtggtgttcagtgcccctctagagctcagcaagatgaaccctccgcct
ccctaccctgggacagtggccgccgctgtggctgctgcagcggctgctgctgcctcagca
acagcctccactgcagcctccaatgctgcttctggggcaggtgggggcaccagtgggact
cctcctcctagtgacctttgtatgaaaaagggagagttttatcctttaggtcagcaacaa
gcgcagtaccccacgccactgggatatgaaaggataacaacatttgacagcagtgggaat
gtggaggaggtatgtcgtcctcgaacgcgccttgtttgcaatcagaatgtgtacacactc
cagggacctggcagctctgccactctcagggtcacctcttcatcctcctcctcctcagct
gacaagaagatccagctgccctatacctctgccactctaaacagactcactgcacctcgc
tattccatacccagcggagatccacccccataccctgacacagccaaccagaacagtact
gttggcaggaaccctggacagaggcttgacagcagtctgatccatgccactctcaggagg
aacagccgagaggccgctctcaaagtttcccagatgctggaaccgcctagaccactgcct
cccaaggccaaaaatagtgcactagcagcctcattccagcagagggtgccaacagcctta
tacacctgcagtcagtgtagcagtggatcaagtgttggaggaactgccccagggagtgct
aatggaatagcaggaggaactattatcagacaagatttccctcccaggaatggggcacca
cacagcacagttattgttcactccaacagtgctactcctttgacctcccagtcctcttac
aacctgctgagctctctggaaggatctggaaatgcagcaggaggaggaagtaacagagac
agggctgaatatgttaattcagcatttactgaggatgaaacactgaatcagacactgagg
catctggcactaggaggaaatgatgcatcagggctggttgtcaaacgcccacctccctat
cagtgggacccagctgccacagaggaggtgtgggttcctcaggaacggacagcaacattg
aacccaactggccctcctggacctcacaaaccacccccactcattcttagtccagctcag
cacttggatgtgtccaggctgccttttgtcctttctccaaagtcccccaccagccccagt
gctgcatcatttcaagctgctgcagcagctgcgggctaccagatctccctccagtatcct
ccagcaactgcctattctggagcccagctccagcccatcccaggttcaccacgcccctgc
tcctccccaaaggaggtggtggcaccagtacccctttcacagcaggatgcaacccttgtc
ttaccgccaggttaccctgcaaacctggcaaacctggcctgctgccccctcccacccatg
tatccaggaggaagcgcttgttctgggcttcccattcctcccattgcccttcacactcct
tggggtacctataactcttgcccccctatgcccagtcctgcagtgccactcccacctaaa
gcctcccacatggcagtagacaaaaatgttctctcgccgccccctcctcccccaccaccc
cctccaccaccaccagcagaactgcagagccatggaggattacaagaggctatggcagag
gctggggaaggttttcaggaggtgctctcgttgactgagagccctgtgcctcagcggtct
gagaagttcagcaagaagaaccgcaagcgggcagacggtcgggctgatgaagctaacgtt
ccaccgctggctgaagggagcaaatcgaaaaaggagggcagagctctgggtgatttcaac
tcactcatctccagcccacggctgggaggaagggacaagaagaaactgaagggtcagaaa
gagcagcagttgaaggctaagaagctgagtaaggctactgccaatagtgagttccaagac
agctcagaaagtgagccagagctgttcatcagtggggatgagctgctcaatcagtgccag
agcagtaaaaagggctggaagagtaagaggaacctgagggctgccagtgaactggatgag
atcaaatgtcgaaaggctaacgagaaggaggacagagggctgggcagccagggctttgtg
tatgtcatggctaacaagcagccgctttggaatgaagccacgcaggtctaccagctggac
ttcggtgggcgcgtcacacaagagtctgccaagaactttcaaattgaactggagggcaga
caggtgatgcagtttggcaggattgatggcaatgcctacatcctggacttccagtatccc
ttctccgctgttcaggcctttgcagtggctttagccaatgtcacccaacgcctcaaatga
DBGET
integrated database retrieval system
