Lates calcarifer (barramundi perch): 108880914
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Entry
108880914 CDS
T04895
Symbol
sash1a
Name
(RefSeq) SAM and SH3 domain-containing protein 1a isoform X1
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108880914 (sash1a)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
108880914 (sash1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_1
SAM_2
SH3_2
SHOCT-like_DUF2089-C
SH3_1
Motif
Other DBs
NCBI-GeneID:
108880914
NCBI-ProteinID:
XP_018528150
UniProt:
A0AAJ7LNK5
LinkDB
All DBs
Position
LG7_1:10559306..10719098
Genome browser
AA seq
1547 aa
AA seq
DB search
MTSNGPVIVFEWLKTLQLAQYVESFVDNGYDDLEVCKQIGDPDLDAIGVYIPHHRQRIHD
AVRRLKEEAKETASGLYFTLEPMPPAAEIYTSHMVDQYESKLRGSKSWTEPNSDRVGRNG
GYMGAQRNLTLGNRRELVIYPKLKLKIMIRDKLIRDGINLAKPPYSNKDGSLGNIDDLAQ
EYSEYYNTCFSDVSDRMEELRKRRVSQELDMEKQDPSSTSLQLRNEIQESLGFSSEVSTP
ETDRKMPLHKSSSEDGSGGKWDNKKKNKSFWQNFRKSQHKPVMRQTSKGEDIGYVASEIT
MSDEERIQLMMMVKEKMITVEEALARLKEYERSRQSSSTDTAEWTEGSAPNLNQSSNCNS
REQSDDEQSEDSVKFKRLHKLVNSTRRVRKKLIKVEEGKKHGSEDFLNLEAPPTCEDNTA
LYTGVLKKPPLPQEASLPSLTQDQLSLDGDTDSLTTSPSSSSLDTWSGHKLVKTFSKSSS
THGLIRPPRRTPVGSGGLGGSISGVGGSGSSFSELDGCGLDDEGKLSRSTTDGEMRKALS
SISHGVSSNEALYAFYGLTKPRPKPHAQSRLLISLDDGPQGSPKHQPANRHHSSWTHRKP
DPNYAYSTKHLLYQRSRNAKTPVSPLSVTPSSPARCDVAKSKGFGSGGGGWVFPSRRLRG
RTAVSELNITYVVERSLYGHLNWAQLVRPVTLSRAERRCLLEEDREADRKWAASVDRCTK
RVLLRIQQKSRTCSFGGFDLSNRSLHVVNTGSEANNKEQEAIYREVVKSPTTSRISLGKK
VKSVKETMRKRMSKKYSSSLSEQSSPDGAPGSPQSPQPDTDSLEKPKLKAGGSVESLRSS
LSGQSSMSGQTVSTTDSSASNRESVKSEDGDDEEPPYRGPFCGRARVHTDFTPSPYDTDS
LKLKRGDVIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSEEEEKPKRPVRRRRKGRPPK
PTSVEELLERINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDPQHRAVLLTAVELL
QEYDSSSDPERSGLSGSQEKLLSEGRGLVGDSPRDSGCYESNENLENGKSRKTSRSSRSS
AGLQSPDYPTLPMTLSTEALQQNSKNQRTKFPKSFFIKPSLKGFNLLGLRKAQRQSPIPA
SRSCEDLDGPPQPTGPWKRSHSLGDLHWEQSYEQKKDVGVEFKPPKEGSKSGSSSPTKAC
REQGSPAHNGTPTVSPKGRAERPPIPSLLPLRPPCPTTQSPTHPELLSSPTPSPPESSGE
KVIRTHPKKPPVPPPVPAKKSKERLANGLRHPPLSLPSSPSPTPSPTHSLTRSHPSSPII
RSSSSSNSSSSPVAPALPAKTPSTPASPCATSSASSMGEEPGTPPTVQPPWLSDLGGKVA
VARKVSHNKMSPDLFTLLEQRLEAEGIDLTEEPYSDKHGRCGIPQPLVQRYSEDLEQPVK
DVASTMDQLRVKELRKQHRMAIPSGGLTEMCRKPLPSGNISTVSDWLISIGLPMYAAPLA
SAGIDTLSRVASLTESSAWEAGVRDQRHARRLVSEARLVREHREVQS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaacggacctgtcatcgtcttcgagtggctgaagaccctccagctcgcccag
tatgtcgagtctttcgtggataatggatatgacgatctggaggtttgcaaacaaatagga
gaccctgacctggatgccatcggcgtctatatccctcaccacaggcagaggattcacgac
gcggtgagaaggctaaaggaggaagccaaagagacggccagtggactgtacttcaccttg
gagccgatgccacccgcagccgagatttataccagtcacatggtagaccagtatgagtcc
aaactgcggggatccaagtcctggaccgagccaaacagtgaccgggttgggcgcaacggt
gggtacatgggcgcgcagaggaacctgacgctgggcaacaggagggagctggtgatatat
cccaagctgaagctgaagatcatgatcagggataaactcatcagagacggcatcaacctc
gccaagccaccctattctaacaaggatggttctctgggcaacatagatgaccttgcccag
gagtactctgagtactacaacacctgcttcagtgacgtcagtgaccgcatggaggagcta
cgcaagcgacgagtctcccaagagcttgacatggagaaacaggatccaagcagcacctct
ctacagctccgtaatgagatccaggaatcattaggcttcagcagtgaggtgtcgactcca
gaaacagacagaaaaatgcccctgcacaagtccagctctgaagatggatctggaggcaaa
tgggacaacaaaaagaaaaacaaatctttttggcagaatttccgcaagtctcagcataaa
cctgtcatgcgacagacatccaaaggagaggatattggctatgtggccagtgagatcacc
atgagcgatgaagagcgaatccagctgatgatgatggtgaaagaaaagatgatcaccgta
gaagaagctctggctcggctgaaggagtatgagcgcagcagacagtccagcagtactgac
actgcagagtggactgagggatctgcacccaatctaaaccagtcctcaaactgcaactct
cgtgaacagtcagacgatgagcaatcagaggattcagtgaagttcaaacggcttcacaaa
ctggtcaactccacacgccgggtcagaaagaaacttatcaaggtggaagagggcaagaaa
catggctctgaagattttctgaatctggaggcacctcccacctgtgaggacaacacagct
ctgtatacaggggtcctaaagaagccccctttgccccaggaggcctctctgccctccctc
acccaggatcagctctccctcgatggagacacagacagtctgaccacctccccttcctct
agcagcttggacacctggtctggacacaagctggtcaaaaccttcagtaagtcctccagc
acccacggtctcatccggccccccaggagaaccccggttggctctgggggcctgggaggt
tccatctctggcgttggaggtagtggctcttccttctcggagttggatggctgtggattg
gacgacgaggggaaactgtcacgctccacgaccgacggcgagatgcggaaggccctgagc
tccatctcccacggggtaagtagcaacgaagccctctatgccttctatggcctcaccaaa
cctcgtcccaaaccccatgcccagtctcgcctcctgatctcgctggatgacggcccacaa
ggcagccccaaacaccaacctgccaaccggcaccacagcagctggacacaccggaaacct
gaccccaactacgcttactccaccaagcacctactgtaccagcgttcgcgcaatgccaag
acccctgtctcccctctgtctgtcactccctcttcccctgcccgctgtgatgtagccaaa
tcaaagggttttggaagtgggggagggggctgggtgttcccctcccggaggctgcgcggc
cgaacagctgtcagtgagctgaacatcacctatgtggtagaacggagcctatacggtcac
ctcaactgggcccagctggtccgcccagttaccctcagccgcgctgagcgccgctgtcta
ttggaggaggaccgcgaggcagacaggaagtgggcggccagcgtggaccgctgtaccaag
cgtgtgctcttgcgcatccagcagaagtctagaacgtgcagtttcggaggctttgacctg
tccaaccgttcgctccatgtggtcaacactggctcggaggccaataataaagaacaggag
gctatatacagagaagtggtcaaatcccccaccacgtctcggatctcactgggcaagaag
gtcaagtcggtcaaggagacgatgaggaaacgcatgtcgaagaaatacagcagctccttg
tctgaacagtccagtccggatggagcccctggttcccctcagtcccctcagcctgacacc
gactctctggagaagccgaagcttaaagctggaggctcagtggaaagtctgcgtagttca
ctcagcggacagagttcaatgagtggtcagacagtgagcaccactgactcatcggccagt
aacagagaaagtgtgaagtcagaggacggtgatgacgaggagccaccttatagaggaccg
ttctgtggtcgtgcccgagtccacaccgacttcacccccagcccctacgacacagactcc
ctcaaactgaagcgtggtgatgtgattgacatcatcagtaagccacccatgggaacatgg
atgggcctgctcaacaacaaagtgggaaccttcaagttcatctatgtagatgtgttgagt
gaagaggaggagaaacccaagaggcctgtgaggagaaggaggaagggccgaccgcccaaa
cccacctctgtggaggagctgttggagcgcatcaacctcaaggagcacatgcctactttc
ctgttcaacggctacgaggacctagacacattcaagttgcttgaagaggaggacctggat
gagctgaacatcagagatcctcagcacagagctgtgttgctcaccgctgtagagctgcta
caagagtatgacagcagcagtgatccagagcgcagtggcctgtcaggctcccaggagaag
ctgctgtctgagggtcggggcctggtgggtgactccccgcgggactccgggtgctacgag
agcaatgagaacctggagaatggtaagagcaggaaaacatcccgttccagtcgttcttca
gcagggctccagtctccagactaccccaccctgcccatgaccctctcaacagaggctcta
caacagaacagcaagaaccagcgcacaaagttcccaaaaagcttcttcatcaaaccctcc
ctgaagggcttcaacctgctggggctgcgcaaagcccaaagacagtccccgatcccagcc
agccgcagctgcgaggacctggatggacccccgcagcccaccggaccctggaaacgctcc
cactctctgggagatctgcactgggagcagtcttacgagcagaaaaaggatgtgggtgtg
gagtttaaaccccccaaggaaggatccaaatcaggcagcagtagccccaccaaggcctgt
agagaacagggttccccagctcataatgggactcctacagtgagccccaaaggaagggct
gagagaccgcccataccctccctgctgcctctccgccccccttgtcccacaacccagtcc
cccactcacccagagctcctctccagtcctactccaagtccccctgagtctagtggggag
aaggtcattcggactcaccccaaaaagcctccggtcccccctccagttcctgccaaaaag
tccaaggaaagactagccaacggcctacgtcacccccctctctccctgccctcctcacca
tctcccactccctcccctacccactccttaacccgttctcaccccagcagccccataatt
cgaagcagcagcagcagcaacagcagcagcagccccgttgcccccgctctacctgccaag
accccgagcaccccggccagcccctgtgccacttcatcagcctcatccatgggcgaggag
ccgggcactcccccaacagtccagcctccgtggctctcggatctcgggggcaaggtggct
gtcgcaagaaaggtttctcataataagatgagccctgacctgttcaccctgctggagcaa
cggctggaggccgagggaattgacttaacagaggagccctactctgacaagcatggccgg
tgtggaatcccccagcctctggttcagcgttactctgaggacctggagcagcccgtcaag
gatgtggcctccaccatggatcagctccgagtcaaagagctccgtaaacaacaccgcatg
gctatcccctctggaggtttgacagagatgtgccgaaagccgcttccctcaggtaacatt
agcacagtctctgattggctcatctctatcggcctgcccatgtatgccgcacccctggca
tcagcgggaatcgacactctgagtcgcgtggcctcgttaacggagagtagcgcgtgggag
gccggggtgcgggatcaaaggcacgcccgccggctggtcagtgaggcacgactggtcaga
gagcatagagaggtgcagtcctaa
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