Lates calcarifer (barramundi perch): 108880928
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Entry
108880928 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108880928
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108880928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
108880928
NCBI-ProteinID:
XP_050927812
UniProt:
A0AAJ8B7G4
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Position
LG7_1:complement(10293458..10299312)
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AA seq
757 aa
AA seq
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MEEDHVHCMSCVNQRCTVRPEPGISCDLINCPLVCGAVFHSCKVDEHHLMCPLVRVPCLN
SGYGCPVTLVRNQMYGHLEVCPAGVVCCTMEWNRWPVSCLDYTSYESLSRGVEEVEQLDM
QLALQDQRTLLESLKVIAMAPTAEGEPLVLGSKANRTMDSAMLTPALEASTLTESPSQLS
SSHQSQPPPPGSAKEKIVSGINGLNEEHFSKLYEATVETARSLAAALDFVSSASSVGVST
ECVNREATMQKSSLSSNGDLQNGLADRTPVAADDLNTGEMEEKSVCSSCLSGNEATKGTD
LKILNSTNGPQSGAMDDSPEIACPVEVQDDSVFKELVTPQMTSPVHISQGVAQRAGHVVL
EDRGLVLLENHRSERKFHNYQFFRGQGQCSLPNGRIGYIPDRSLYRLRPKMEDKAVDTSD
LEQDDNPMGLGEIDLITAALLFCLEESRECRRISDTVYVDGYRVDFGTQTFTFPAAILVT
NTRVGDMASASACDHAAPQLSYPSPFRTLRLGLVLEALEVEAVPHNRYLPNNPRYQHMFP
FICGQSFRRDQFSSHFTNVHGDIHAGLNGWMEHRCPLAYYGCTFSQRRFYPSTQGAKVVH
DRNLRSFGVQLCPRAKLPGDSQSDQFSGLPIEILWHIAGFLDSFSLCQLSLVSRTMREVC
ASLLQTRGIVELQWERKRGAGAHGTVSWQIKNRVWRFSTAFSPVLSWGFTDLPSMSDHLK
KCHFNVVEHKTEPIPLPAMCTARDGHSLRRVLRHVNT
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaccatgttcactgtatgtcctgtgttaaccagagatgcacagtcagacct
gaaccaggcatttcttgtgatcttatcaactgtcctctagtgtgtggggctgtatttcac
tcctgcaaagttgatgagcaccaccttatgtgcccactggtgagggtcccctgcttaaac
agcggctatggttgccccgtcaccctggtgcgcaaccaaatgtatggacaccttgaggtg
tgtccggctggagttgtgtgctgcaccatggagtggaacagatggcctgttagctgcctg
gactatacttcctatgagagcctgagtcgtggggtggaggaggtggagcagctagacatg
caacttgcccttcaagaccagcgcacactactggagtccctcaaggtgattgcaatggca
cctactgcagagggagaaccacttgtcctgggtagtaaggcaaacaggacaatggattca
gctatgctaacacctgcccttgaggcctccacccttacagagtcaccttcacagttatca
tcctcacatcagtcacaacctcccccaccaggttcggcaaaggagaagattgtcagtgga
ataaatggcttgaatgaagagcacttcagtaaactttatgaggccacagttgagactgca
agaagcttagctgctgctttagactttgttagcagtgccagttctgttggcgtcagcaca
gagtgtgtgaacagagaagccactatgcaaaagagtagtttgagcagcaatggagacctt
cagaacggactggcagacagaacacctgtagctgctgatgatttgaatacaggagagatg
gaggagaaaagtgtttgttctagctgtttgagtggaaatgaagctactaaaggtacagat
ctgaagattttaaactcaacaaatgggccacagtcaggagcaatggatgactctccagag
atagcctgtccagttgaggtgcaagatgacagtgtttttaaagagctagtgacccctcaa
atgacatctccagtgcatatcagccagggtgtggcacagagggctggtcacgtggtcttg
gaagacagagggctagttcttttagaaaaccataggtctgagcgcaagttccacaattac
caatttttcaggggccagggccagtgctcattacctaatggacggataggttacatccca
gacaggtcactgtatagactccgacccaaaatggaggacaaggcagtggatacctcagat
ctggagcaggacgacaaccccatgggtctaggagagatagatctgatcacagcagccctg
ctcttctgtttagaagagtccagagagtgtagaaggatctctgacacagtctatgttgac
ggctaccgtgtagactttggcacgcagactttcacttttcctgcagcaatcttggtaaca
aacactagagtaggtgacatggcctctgcatctgcctgtgatcacgctgcccctcagctc
tcctacccgagccctttccgcactctccgtctcggtcttgtccttgaagctctggaggtg
gaggctgtccctcataaccgctacctccctaacaacccacgttaccagcacatgttcccc
ttcatctgtggtcagtcattccgccgggaccagttttcttcccatttcacaaatgtccat
ggtgacattcacgctggcctcaatggttggatggagcaccgctgccctctggcatattat
ggctgcacattttcccaacggaggttttacccatccacccagggggcaaaggtggttcat
gacaggaacctcaggtcctttggggttcagctttgcccaagggcaaaacttccaggagac
tcccagtccgatcaatttagtgggctgcccattgagatactgtggcacatagcggggttc
ctagacagttttagcctgtgccagctgtcattagtttcacggactatgagggaggtgtgt
gccagtctcctccagaccaggggcatagtggagctgcagtgggagcgaaaacgaggcgct
ggtgctcatggcactgtgtcatggcagatcaaaaacagagtgtggagattcagcactgcc
ttcagcccggtgttgtcatggggtttcactgacctccccagcatgtcggaccatcttaaa
aagtgccacttcaacgtagtggagcacaagacagaaccaatacccctccctgctatgtgc
actgccagagatggacactcactccgtcgcgtcctgcgtcatgttaacacctga
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