Lates calcarifer (barramundi perch): 108880948
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Entry
108880948 CDS
T04895
Symbol
pard3ab
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04517
IgSF CAM signaling
lcf04520
Adherens junction
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108880948 (pard3ab)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108880948 (pard3ab)
09144 Cellular community - eukaryotes
04520 Adherens junction
108880948 (pard3ab)
04530 Tight junction
108880948 (pard3ab)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108880948 (pard3ab)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108880948 (pard3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108880948
NCBI-ProteinID:
XP_018528206
UniProt:
A0A4W6CGF3
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All DBs
Position
LG4:3516867..3723174
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AA seq
1418 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLIAVYDEQEPHHGGDGTSASSTGTQSPDLFAADLSAGSGASAFQPY
QAASEIEVTPSALRTNMPLHVRRSSDPALLTINGPFSGGGESRVQTEEPPSRKNPTRWST
TAGFLKAHHSSGTNSLERKGKGMDTYRSLPRDAGTWANQREFQRETARSSLSANHPMVDR
WLERQEQEEETREEENGRIEPVGRADSCMDHTPVRSLEDIVKLVEVSNDGGPLGIHVVPF
SGRDRRTLGLLVKRLERGGKAEQQGLFQENDCIVRINNGDLRNIRFEQAQNMFRQAMRSP
VIMFHVVPSSMKAHYEQLSHAERNPAYASGRFSPDSLTGSTVSGMDHTPQRMSRHGSQTH
PHSHPHPHSHAHQDLTDGYPPLTHPAVSAAKPPTGHTHSPQRGMNSTPTGGYTKKVGRRL
NIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLN
GRTQEEVVSLLRATPMGGAVGLLVLRQEEAFLPREVNAEPQMQSPRDAHPRQPVIAGKPH
WLIEKTEEDELVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSII
NGGAACKDGRLRVNDQLIAVNGESLLGKTNQDAMETLRKSMSTEGNKRGMIQLIVARRVA
KRNEETPGSPLGPQQAMNTSLDDHERRISHSLYGGLEGLDDNLMPRQGMMPRTIGNYQLS
PTVNMPQNDTVIIEDDRPPLLPPHLSDQSSSSSHDDVGFTADITPPWAKELPSQNDSSLV
QDENHPDGAFQREGFGRQSMSEKRTKQFGDAAQLEIIKTRKSKSMDLVADEINLTPRPEI
NTGSSTKDVGPSLGLKKSSSLESLQTAVAEVTLNGDLPFHRPRPRIIRGRGCNESFRAAI
DKSYDRPAATEEDDEGMETLEEDTEESSRSGRDSVSTVADQTPLSGTEKPLVNGTNRTKE
EKKKDKDKGGKEQKKKQEGGKEKDKGKAKKGMLKGLGDMFRFGKHRKDERPGEKMDRKGS
SKWRPEETQVSEEETMKMRMEQERIQAKTRELRERQARERDYAEILDINRTPERSSEEEH
PYAGINPLNSSVDSGHSRPHSPRDDYPHIHPHHQHQHSDSLYTQVSKARSDRPPSADSNR
LAPSNHDRIQRLRQEFQQAQNVPDDPDDRRRTYSFEQPWSNASSNGPGGYSQPGRHSVSV
EVQMQRQRQEERDSFAQAQRQYSSLPRQPRKNPSSISQDSWEKAYTPGEGFQTAKDNPRY
SSYQGSRNGYPGGGGVNARVLLEAQELLRQEQRRREQEAKGKLMQEGTGNSSYEGYSTAH
LKDPASPKGPYRQDVPPSPSQLARLNRLGSEKGRLFYS
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacggtgtgttttggcaggacccgggtggtggtgccgtgcggggatggaaat
attaaagtgcacacactcatccagcaagctgtcatgagatacaagaaggctatcgccaag
gatgctagttactggctgcaggtccaccggttggaacacggtgatggcggcatcctcgac
ctggatgatgtgctctgcgatgtggccgatgacaaagacaggttgatagccgtgtatgac
gaacaggagccccatcatggaggtgatggtaccagcgccagctccacagggacccagagc
cccgacctctttgctgcagacctcagcgccggcagtggagcctcagcctttcaaccctac
caggctgccagcgagatcgaggttacaccctccgccttgcgcaccaatatgcccctccat
gtccggcgcagcagtgacccggccctgctgaccattaatgggccatttagcggtggcggc
gagtcacgggtccaaacggaagagccgccatcaaggaagaacccaacccgctggtccacc
accgctggtttcttgaaagcacaccactcatctggcaccaacagcctagagagaaagggt
aaaggtatggacacatatcgcagtctgccgcgggatgcagggacatgggccaatcagaga
gaatttcagagagagacggcccggtcgtcactcagtgccaatcaccccatggtggaccgc
tggttggagagacaagaacaggaggaagagaccagagaagaagaaaacgggaggatcgag
ccggtcggacgagctgactcctgcatggaccacacccctgtgaggtcactggaagacata
gtcaaactggtggaggtgtcaaacgacggtgggcccctgggaatccacgtggtgcctttc
agtggcagggaccgcaggactcttggcttgttggtcaagcgtctggagcggggagggaag
gccgagcagcaaggcctcttccaggagaacgactgtatcgtccgtatcaataacggagac
ctgcgaaacatccgctttgaacaagcccagaacatgttccgtcaggccatgcgctctcca
gtcatcatgtttcacgtggtgccgtcatccatgaaggcgcactacgagcagctgtcccac
gctgagaggaaccctgcgtacgcctcgggccgttttagccccgactccctgaccggcagc
accgtctccggcatggaccacaccccgcagaggatgtcccgacacggttcccaaacgcat
ccacactcccacccgcaccctcattcccacgctcaccaagacctgaccgatggttacccc
cctcttactcacccggcggtctctgcagccaagcctccaacaggtcacacccactcacct
cagagggggatgaactccaccccgacaggaggatataccaaaaaagtcgggcggaggctt
aacatccagctaaagaaaggtccagagggactcggcttcagtattacgtcgcgggacgtt
cccatcgggggctcagcacccatctacgtaaagaacatactgcctcggggagctgccatc
caagatggccgcctcaaggcaggagacaggttgctggaggtgaacggagtggacctgaat
gggaggacccaggaggaggtggtgtctttgctcagagccacacccatgggtggtgccgta
gggctgctggtcctacgccaggaagaggcttttctccctcgagaagtgaatgccgagccc
cagatgcaaagccccagagatgcgcatccaaggcagcctgtgatagccgggaaaccccat
tggctgattgagaagacggaggaggatgagctggtcctgactccagatgggacccgggag
ttcctgacctttgagatccccctcagtgattcaggttcagcaggtttgggtgtcagcgtc
aaaggcaaccgctccaaggagaaccacgctgacctcggaatctttgtcaaatccatcatc
aatggaggagcagcctgcaaggacgggcggcttcgggtgaacgaccagttgattgccgtc
aatggggagtcgctactgggcaaaaccaaccaagatgccatggagacgctccgcaagtcc
atgtctacggaaggaaacaaacgtgggatgatccagctcattgtggccagacgagtggcc
aaaagaaatgaggagacaccagggagcccactgggaccccagcaggccatgaacacctct
ctggacgaccacgagcgccgaatctcccactccttgtatggtggcctagagggtcttgat
gacaacttgatgccacgacaaggcatgatgccacgcacaataggtaactatcagctctca
ccaaccgtcaacatgccgcagaacgacactgtgatcatagaggatgaccggccgccgctc
ctcccaccccacctctctgaccagtcttcgtctagctcccatgacgacgtgggcttcacc
gctgacatcacgcctccatgggccaaagagctgcccagtcaaaacgacagctccctggtt
caagatgaaaatcatccagacggtgctttccagagggaaggtttcggacggcagagcatg
tcagagaaacgcaccaaacagttcggagacgctgctcagcttgagatcatcaaaacacgc
aagtctaagagcatggatctagtagctgacgagattaacctcacccctcgtcccgagatc
aacacaggttcctccacaaaggatgtgggaccatcactaggcttaaagaagtccagctct
cttgagagcctccagacagccgttgccgaggtaacccttaatggggacctccccttccac
aggcctcgcccccgtatcattagggggcgtggctgcaacgagagcttccgggcagccatc
gacaagtcctacgaccgtccggctgccacagaggaggatgatgagggcatggagacattg
gaggaggacacagaggagagttcacgatcagggagagactctgtgtccacggtggccgac
cagaccccactgtcgggcacagagaaacccctggtcaacggcaccaaccgaaccaaagag
gagaagaagaaggacaaagacaagggagggaaggagcagaagaagaagcaggagggaggg
aaggagaaagacaagggaaaagccaagaagggaatgctcaaaggactcggggacatgttc
aggtttgggaagcatcgaaaagacgagcggccgggggaaaagatggatcgtaaaggctcc
agcaagtggagacctgaggagacgcaggtttctgaggaggagacgatgaagatgaggatg
gagcaggagaggattcaggctaagaccagggagctgagggagcgccaggccagggaacga
gactacgccgagattctggacataaaccgcactccagagaggtcctctgaggaggagcac
ccgtacgccggaatcaaccccctgaacagctctgtggacagtggtcacagccgaccccac
agcccccgagacgattacccccacatccatccacaccaccagcaccagcactctgattcc
ctctacacccaagtcagcaaggcccgcagtgaccggcctccatctgcagacagcaaccgg
ctagctcctagcaaccacgaccggatacagaggctgaggcaggagttccagcaggcccag
aacgtcccagacgaccctgacgaccgcaggagaacctacagcttcgagcagccctggtcg
aacgccagcagtaacggtccgggcgggtacagtcagccgggtcgccactcggtgtcggtc
gaggtccagatgcagaggcagagacaggaggagagagactcgttcgcccaggcacaacga
cagtacagctccctaccaaggcaacccaggaagaaccccagctccatttcccaagactcg
tgggaaaaggcgtacacacctggagagggcttccagacagccaaggacaaccccaggtac
tccagctaccagggttccaggaacggctacccaggcggcggtggtgtcaatgccagagtc
cttctggaggcccaggagctcctgaggcaggagcaaaggcgccgagagcaggaagccaaa
gggaaattaatgcaggagggcaccggtaacagcagctatgaggggtactcaacagctcac
ctgaaggacccggcatccccaaagggtccgtaccgccaagatgtgccaccttcaccttcg
cagttagcaaggcttaatagattggggtcagagaaaggaagacttttttattcttga
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