Lates calcarifer (barramundi perch): 108881037
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Entry
108881037 CDS
T04895
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108881037
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108881037
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108881037
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
108881037
Glycosyltransferases [BR:
lcf01003
]
O-Glycan biosynthesis
Glycosaminoglycan
108881037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
108881037
NCBI-ProteinID:
XP_018528323
UniProt:
A0A4W6BUB8
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Position
LG11:complement(14087074..14102592)
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AA seq
879 aa
AA seq
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MVASARVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEGERKTRRSKLPDHNSQDP
KRDIALWDKQNSLSGRNRGRWNTRLERTGGTASSSLRGGTNRRGGKPNLRMKSPQERGMM
EAGMEGVVPHDLSSSRNFSDTRVGNDGAARLPAAAIPGEPGSVDGAHQAPSSDFVPKCDI
VGKDALSALHRAGSQQCRQEIANIVCQHQAGQLMPDALPQFCPQLGISNPVQAVGELDNS
LSKVENPVRVAFVLMVHGRAVRQLKRLIKAIYHRDHYYYIHVDKRSGYMHREVLQIAQQF
PNVRATPWRMVTIWGGASLLKAYLRSMQDLLSMLDWKWDFFINLSATDFPTRTNDELVAF
LSQHRDKNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERSIPEGLEVSGGSDWFAL
TRRFVEYVINSQDDLVSGLKQFYSYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRK
LGCKCQYKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESTVNQEAIDILDTHLYG
QYAPGTIAIKAYWESLFEQLDGVGSLSDVALTAYTAFFRLGLKSLVTTQSNVEACRFEPV
GYPLSVHLYFYDDRFQGYLVRQEAQAVGSKVREMLEIWAVPQVSLVLETNLKEFERLKNL
EIGTEWDPKERIFRNFGGVIGPLDEPLAVQKWARGPNLTATIVWIDPALVVATSYDITVD
VDAEYTQYKPPLQRPLRPGTWTVRVLKQWERVAEVRFLVMPLTFKDKEPLRKEEDSWFHA
GPPGNQYLEQSFQQLSSMLRLPPQEPAMQEAQRNAELVGQPLEAWVDSNVRTFWVMGDLC
ATQTSSCPALGPCSKTSWSSLSPDPKSELGPVKSDGRIR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgctcgagtgcagaagctcctccgacgatacaaactcgcgattgccgcc
gcattaaccatcctcctgatccaagggctggtagtatggagtctgagaagtctggaggag
ggcgagggagagagaaaaacacgacggtctaagctgcctgaccacaacagccaggatccc
aagagagacatagcactttgggacaaacaaaactctttgtcagggagaaacaggggcaga
tggaacaccaggttggagaggacagggggcaccgcatccagttcgcttagaggaggaaca
aaccggcgaggaggaaagcccaacctcaggatgaagtctccccaggagcgggggatgatg
gaggctggaatggaaggtgtggtcccccatgacttgtccagcagccgcaacttcagtgac
acccgagtaggcaatgatggggcggccaggcttcctgctgccgccataccaggggagcca
ggcagcgtggatggcgcacaccaagcccccagcagtgactttgtgcctaaatgtgatatc
gtaggcaaggatgctctgtctgccctccatcgtgccgggtcacagcagtgccgacaggag
atcgccaacatcgtgtgccagcatcaggctggtcagctcatgccggacgcacttcctcag
ttctgcccacagctcggtatatcaaatccagttcaggctgttggcgagctagacaacagc
ctgtccaaagtggagaaccctgtcagggtggcttttgttctgatggtccatggtcgtgcc
gtacggcagctcaagcgcctcatcaaagccatataccaccgtgaccactactactacatc
catgtggacaagcggtccggctacatgcatcgagaggtcctgcagatagcccagcagttc
ccaaatgtgcgagccacgccctggaggatggtcaccatctggggtggtgccagcctgctg
aaggcctacctacgcagcatgcaggacctgctctccatgctggactggaagtgggatttt
ttcatcaatctcagtgccacagacttccccaccaggaccaatgatgaactggtggctttc
ctttcgcagcacagggacaagaacttcctcaagtcacatgggagagagaatgcccggttt
attaagaagcagggccttgaccgtctcttccacgagtgcgacaaccacatgtggcgcctc
ggcgaacgcagcatcccagaaggcctggaggtctcaggtggctccgattggtttgcgctc
acccgccgctttgtggagtacgtcatcaactcccaggatgacctggtgtcagggctgaag
cagttctattcctacgctctgctccccgctgagtctttcttccacacggtgttggggaac
agtcatatgtgtgacaccctggtggacaataacctgcgcgtcaccaactggaatcgcaag
ctgggctgtaaatgccagtacaagcacattgtcgactggtgcggctgctcccccaatgat
ttcaaaccacaagacctcatcaggattcagcaattgacccgtccaacattcttcgcccgt
aaatttgaatcaacagtgaaccaggaggccatagacatcctggacactcacctgtatggc
cagtacgccccgggcaccatcgccatcaaggcgtactgggagagcctgtttgagcagttg
gatggcgttggctcgctcagtgacgtggctctcactgcttacactgctttctttcgcctg
ggcctgaagagtctggtgactactcagagcaatgtggaggcctgcaggtttgaaccagta
ggctaccctctatcggtacacttgtacttttatgatgaccgattccaagggtacttggtg
cgtcaggaagcgcaggcggtggggtcaaaggtcagggagatgctggagatatgggcagtg
cctcaggtctcccttgtcctcgagacgaacctgaaagagtttgaaagactcaagaatctg
gaaatcggcacagagtgggatcctaaggaaagaatcttccgtaactttggtggggtgatc
gggcctttggatgaacccctggcagtccagaagtgggcccgtggtcccaacctcacagcc
actattgtgtggattgacccagctctggtggtggcaacatcgtacgatatcacagtggat
gtggatgcagagtacacccagtacaaaccaccgctacagcggccccttcggcccgggacc
tggacagtacgggtgttaaagcagtgggagcgtgtggcagaagttcgcttcctcgtcatg
ccgctaacctttaaagacaaggaaccactacgcaaagaagaggacagctggttccacgca
ggtcctccagggaaccagtacctggagcagagtttccagcagctgagctccatgctgagg
ctgcctccccaggagcccgccatgcaggaggctcagcgcaacgccgagcttgtgggtcag
cccctcgaagcttgggtggacagcaacgtgaggaccttctgggttatgggcgacctgtgc
gccacacagacttcctcctgcccagcattgggaccttgctccaaaacctcctggagctcc
ctgtccccagaccccaagtctgaactgggcccagtcaaaagtgatgggcggatcaggtag
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