Lates calcarifer (barramundi perch): 108881074
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Entry
108881074 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108881074 isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108881074
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108881074
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108881074
Protein kinases [BR:
lcf01001
]
Serine/threonine kinases: Other
TAF1 family
108881074
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108881074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
LRR_8
LRR_14
nSTAND3
NPHP3_N
nSTAND_NTPase5
AAA_22
AAA
TsaE
SRP54
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
108881074
NCBI-ProteinID:
XP_018528368
UniProt:
A0A4W6BXB6
LinkDB
All DBs
Position
LG11:15080238..15101464
Genome browser
AA seq
1651 aa
AA seq
DB search
MPQFEEVLDRVRQALTWASPSEIQALLEGLVEERIISDAYSKSLSLHRLAEGISNTAVHG
KPTWERESDQIHSRGSQWDHLSQVWDCGSRESAVTDHNQTRLESMLSAHENNSTRSSQRM
DLLYEDRVIHGNGLIHELNWGPAMDDLNHRIMSTPMTCDDQHSLRLNDEIAELLRSAELM
LKPISDNERVDEGISEDEKEWLEKVEEAARRIAVPLWQNWDRGQRMLLPLVPCMTTGCAT
NENKATDCEAQCPDVNMEVEAELALACKTLDLYTDSFRWMENTDTSFALDSGGDTEGLCF
SGVSSAVVTALNKDHFDIYGAARNPSPVQASAATDNTDTCLEGQVSTCWSADGTTDTTED
LMCLTGDAQYGTDARFADVADLLSPCTPTDTHTLAQYNSFYSKTGHSMTLGDVDTYSSTR
CSADCITDFHEKREDEESLDSHWGAKMQEVDQDQSDLTFTDLDLPDDISEFMNEDYLLGT
ADVLFDCDSLLNYEEFNNPSDIVVTTELPRPDSHEERQDEPPSRKRRKVPRAQQCTDENT
PSRPKRSRRAGKAQTKEPQDEPAVTQSIDTGPEPSLTETEGLSTPPTRILHFHPSIRFIT
IPDAQGYHVVQTLRFRPPVITPTYILVPAPSTPSKHEMQPLSPEDGAVAPVQMSSSPPGS
LSDTASKAMATPVSSPVSPSTEISPCKESPLPQSPTVLDIPHVVKDYIQEAKAHMNQTCQ
DMEEGLSLTSHYVDVQLSHREIRSGKNTNKCLDKELVIMGDTDRQKSLLGKSQIFERSNG
DKSKRYILLLGNAGMGKTTLIRKLCLDWSRDCIPQFDFVFLLDGKALTLTKPTFSLQTLL
LNLSAFAPSCMDPEAVYAQILAAPKRVLIIFDGFDELREYEMLLQTQEKDLITSLQKDSR
AQTYTVRQLYSAILQRVLLPGCTLLLSTRPRGTANQLLRRADSFLEVCGFTPTDVETYVS
QYFTDTALRTSALECLKNCSYLHLLCWNPGLCRLVCLVLEQSKGLEVLPRTLTGLCHQVL
CLKMEKDSRSTNVQAEVQTQIPLQSEEETQTQISSNNQRNKNTQTKSRAQGRTRTRSRTR
SQRKRGAKEQENKEDEVYREMNSGSREAEERELLSQLSSLAWEGVKTNSSMLPTRRTLCA
KLRAFGLRTRLFLSHPLRTRLMVSIGESEGGGREDKDEMGGGGERKENRGRMDMENCDAS
DDHITLWANPFLQSYLAGVHLSLSRTVSDRTFLQTLPFQSGPKGRRRPQREELELTQRFA
VGLLFHNRTELQRLHSYTETSFRDMVVSKQGLVTKHLEGLSYSDLSPAQVLEACHYVYEA
SFSHGNGSRGSGSTQLVAHLAANLPEVLTFHGVPLNPTDVFTVQNTLEIGGTEGRSFCLD
LEDSGIQVSGLRALVGLNNINTYRACIADVITLWEQLEKSSEEGLLQGAVSKLKIHPLKA
TQVCHVEHLAKLVNIHMHKRLSDSCSQSDSILAEGVPAVKELRKLEFELGPEKGPLGLPM
LWELLPGLHNLQHLDLENSKIGDEGAEKLADALASLSSLEILNLSQNCIGNHGVKRLTTT
LRDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTALDVSYNRLTDVGVQSLGASLRNC
QKMKTLRMWNQFIPYGVFERLQQQDSRILWH
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgccccagttcgaggaggtcctggacagagtgcgccaggctctgacctgggcctctcct
tctgagatccaggctctgctggagggtttggtggaggagcggatcatctcggacgcctac
agcaagagcttgagtcttcatcgactggctgagggaatttcaaatacggctgttcatggc
aaaccgacgtgggaacgggaatctgatcagattcattctcgaggatcccagtgggatcat
ctcagccaggtgtgggattgtgggtcgagagaatctgccgtcactgaccacaaccagaca
agattggagtctatgttatcagcgcatgaaaataacagcacgagatccagtcaaagaatg
gatctgctgtatgaagacagagttattcatgggaatggactaattcatgaattgaattgg
gggccagcaatggatgacctcaatcataggatcatgtccacacccatgacatgcgatgac
caacacagcctcagactcaatgatgaaatcgcagagctgctgagaagtgcagaattaatg
ctgaagccaataagtgataatgaaagagttgatgaggggatttcggaggatgagaaggag
tggttagagaaagtagaggaggcggctaggaggatagctgtccctctatggcagaactgg
gacagaggacagaggatgttgctgcctctggttccttgtatgactactggctgtgcaaca
aatgaaaataaagcgacagactgcgaggcacaatgccctgatgtgaacatggaagtggaa
gcagagctcgcacttgcttgcaaaacactggacctctacactgacagcttcaggtggatg
gagaacacagacacaagctttgcactggattcaggaggagacactgagggcctctgtttc
tctggggtcagcagcgcggtggtgaccgcattgaacaaggatcactttgatatctatgga
gcagcgagaaacccctcgcctgtgcaggccagcgcggcaacagacaacacagacacctgt
ctggaaggacaggtcagcacctgctggtcagccgatgggacaacagacacaacagaggac
ctgatgtgtctcacaggagatgcacaatatggcacagatgctagatttgcagatgtggca
gatttactttcaccttgcactccgacagacactcacactcttgcacaatataactcattt
tactcaaaaacaggtcatagcatgacattaggagatgtggacacctatagctcgacaaga
tgcagcgctgattgcataacagacttccatgagaagagagaggatgaggagagtctggat
tcacactggggtgccaagatgcaagaagtagatcaggaccaatctgatcttaccttcaca
gatttagatctaccagatgatatatctgaattcatgaatgaagactacctattaggcaca
gcagatgtactgttcgactgcgattctttgttgaattatgaggaattcaacaaccccagt
gacattgttgtgacaacagagctgccccgtccggatagccacgaggagagacaggatgaa
ccaccaagccgaaaaagacggaaagttccccgggcacagcagtgtactgatgagaacaca
ccatccagaccaaaaaggtccaggagagcaggtaaagcacaaacaaaagagccacaagat
gagccagctgtcactcagagcattgacacaggaccagagccaagtcttacagagacagag
ggcctttccacccctccaacaagaatccttcacttccatccctccattcggttcatcacc
atcccagacgctcaaggatatcacgtggttcagactctgaggttccgtcctccggttatt
acacctacatatatattagttcctgctccctccacaccctccaaacatgaaatgcaacca
ctctcgccggaggacggggcagtagcaccagtccaaatgagctcatcgccaccaggatct
ctttcagacactgctagcaaagccatggcaacccctgtctcttcaccagtctccccttcc
actgagatatccccatgtaaagaatcacctcttcctcagtctcccaccgtccttgacatt
ccacatgttgttaaggactacattcaggaggccaaagcccacatgaatcaaacttgccag
gatatggaggagggtcttagcttgacctctcattacgtggatgtacaattgagtcacaga
gagattcgttctggaaaaaacacaaacaaatgcctggacaaggagcttgtcatcatggga
gatacagatcggcaaaaaagcttgttggggaagagtcagatctttgaaaggtcaaatggg
gataaatccaaacgctacatattgctacttggcaatgcaggcatgggaaaaaccaccctg
atcaggaagctttgtcttgactggtccagagactgcatcccacagtttgactttgtcttc
ttattagacggcaaagcactcaccttaacaaagccaaccttcagccttcagaccctccta
ctaaacctctccgcctttgccccttcctgcatggacccagaggcagtttatgctcaaatc
cttgcagcccctaagcgagtgctcatcatctttgatgggtttgacgagttgagggagtat
gaaatgctactccagactcaagaaaaagacttgataacgtctttgcagaaagacagtaga
gcacagacctacacagtaagacagttatactctgccatccttcagagggtccttcttcca
ggatgcactcttctgctctctacacgaccaagaggtactgccaaccagcttctccgtcgg
gcagacagctttctggaagtatgtggctttactcccacagatgtagaaacatatgtgtcc
cagtacttcactgatactgccctcagaacatctgctttagagtgcttaaaaaactgcagc
tatctacatctcctctgctggaaccccggactatgtcggttggtgtgcttggttttggaa
cagtccaaaggtttggaggtcctaccaagaactttaactgggctctgccatcaagtgctt
tgtttgaaaatggaaaaagacagtaggagcacaaacgtacaggctgaagttcaaacacaa
atacccctgcaatctgaagaagaaacacagacacaaatctcaagcaataatcaaagaaac
aaaaatacacagacaaagtccagagcacagggtcgcactcgcactaggtctcgcactcgc
tcccaaagaaaaaggggggcaaaagagcaggagaataaggaagatgaagtgtacagagag
atgaacagtggtagcagggaagcagaggagagagagttgctgtctcagctgagctccttg
gcctgggagggggtcaaaaccaactcctccatgcttcccaccagacggactttatgtgcc
aaactcagggcttttggccttaggacaaggcttttcctctctcaccccctgaggacaagg
ttgatggtctcaattggtgagagtgagggaggaggaagggaggacaaagatgagatggga
gggggaggagagaggaaggaaaacagagggaggatggacatggagaactgtgacgccagt
gatgaccacatcacattgtgggccaaccctttccttcagagttacttggcgggtgtccat
ctatctttgtcaaggactgtatcagaccgcaccttcctccagaccctccctttccagtca
ggcccaaagggacgtcggcgacctcaaagagaggagcttgaactcactcagcgatttgcg
gttggcctcctcttccacaacagaacagagctgcagaggcttcattcatacacagagacg
tctttcagggatatggtggtcagcaagcaaggtttagtgacaaaacaccttgaaggtctt
tcttacagtgacctgagtcctgcccaagtcctggaggcatgtcactatgtttatgaagca
agtttcagccatggcaatggcagcagaggcagtggcagcacacaattggtcgctcacctg
gcagcaaatcttccagaagtcctgacatttcatggagttccactcaacccgacggatgtg
ttcaccgtgcagaatactcttgaaattggtgggactgaagggagaagtttctgcttggat
ctggaggattcagggatacaagtttcaggactcagggcattggtgggactcaacaacatc
aacacatacagggcatgcattgctgatgttatcaccctatgggagcagctggagaagagt
agtgaagagggactcctacaaggggcagtgtccaagttaaagatccaccccctgaaagcc
acacaagtgtgtcatgtagagcacctagcaaagctggtgaacatacatatgcacaagagg
ctgtcagacagttgcagccaatcagattctatcctggcagagggagtaccagctgtcaaa
gagttacgcaagctggagtttgagcttggtccagagaaaggtcccctgggtcttcccatg
ctgtgggagctcctaccaggtctacacaacctacagcacttagatctggagaacagtaag
ataggggacgagggagcagagaaattggctgatgctttagcctcactcagttcgctggag
atactcaatctgtcacagaactgtataggaaaccatggggtgaagagacttacaaccaca
ttaagggatctgcccaaactgcactgtttgagtctctacagtaatgtgatttctgacgaa
ggggcagagagtttagcagctgttctcccacacatggcgtcactcaccgccctggatgtg
agctacaacaggctgacagatgttggtgtgcagagccttggagccagtctgagaaactgt
caaaagatgaagactttaagaatgtggaaccagtttatcccatacggagtctttgaacgt
cttcagcagcaggacagcaggatcctctggcattag
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integrated database retrieval system
