Lates calcarifer (barramundi perch): 108881078
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Entry
108881078 CDS
T04895
Symbol
socs1a
Name
(RefSeq) suppressor of cytokine signaling 1a
KO
K04694
suppressor of cytokine signaling 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
lcf04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108881078 (socs1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108881078 (socs1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108881078 (socs1a)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108881078 (socs1a)
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GFIT
Motif
Pfam:
SH2
SOCS_box
SH2_1
DUF4614
RAP1
Motif
Other DBs
NCBI-GeneID:
108881078
NCBI-ProteinID:
XP_018528379
UniProt:
A0AAJ7LNX1
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Position
LG11:complement(15151696..15154158)
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AA seq
245 aa
AA seq
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MVADSTVEGHDKTHLSSSSSSSSSSSSSSSSSSSSSSSSFSSSSSFSSSSSLSSSSSLRA
ESDQLQQWAPPEPRPRSAPSVPSVYQTHFRTFSCQEDCTIITDTAAKLERSGFYWGPLGV
EDAHRMLRNAPLGSFLIRDSRQKDIFFTLSYHAKSGPVSVRIDYKRQKFSLAGNERSFPT
LFALLEHYINSPKKSLSTPYRKWEPTLQELCRKRIMELCGGPSRVPELPVTHVVQDFLLE
FPYKL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggtagccgacagcacagtggaaggccatgacaagactcacttgtcaagctcatcgtcg
tcatcatcctcttcatcatcatcatcctcatcgtcatcttcatcctcctcatcatccttc
tcctcatcctcgtccttttcttcatcatcctcgctgtcctcatcgtcatcactccgcgca
gagtcagatcagctgcaacagtgggcccctccggagccgaggccaaggtcagcgccctcc
gtcccctccgtgtaccagacccacttccgtaccttttcctgccaggaggactgcaccata
atcacagacaccgcagccaagctagagcgcagcggcttctactggggccccctgggagtg
gaggacgcccaccgcatgctgaggaacgctccgctgggaagcttcctcatccgcgacagc
cggcagaaagacatcttcttcacgctgtcctaccacgccaagagcgggccggtcagcgtg
cgcatcgactacaagcgccaaaagttctcactggcgggcaacgagcgctccttcccgacg
ctcttcgccctgttggagcattacatcaactctcccaagaaaagcctcagcaccccatac
agaaaatgggagcccacgctgcaggaactgtgcaggaaacgcatcatggagctgtgtggt
ggaccaagccgggttccagagctgccagtcacccatgttgtccaagacttcctgttggaa
ttcccttacaaactatga
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