Lates calcarifer (barramundi perch): 108881103
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Entry
108881103 CDS
T04895
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108881103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881103
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108881103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Lgl_C
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108881103
NCBI-ProteinID:
XP_018528421
UniProt:
A0AAJ7LQQ6
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Position
LG11:15617938..15652338
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AA seq
1067 aa
AA seq
DB search
MMKFRFRRQGTDPQREKIKQELFAFNKTVEHGFPHQPSALAFDPKLQLMAIGTKSGAIKV
YGAPGVEFTGLHKDTTAVTQIHFLPGQGRLLSLLDDNTIHLWELVAGAPREVGGVKKEGV
VSLQEVGNYSLPGRPGIESCSATRVTVLLLLRSCDLLCIGTEGGGVYFLQLPRLSLKDNH
TLLQDQVTQSLPDDYRCGKSLGPVESLQEHPQQSGKILIGYSRGLVVLWDLSTRHADQLF
LGKQQLESLVWERTGNLFVSSHNDGGYSVWPVTSGNTCSHQPVTSTIPYGPFPCKAISKI
LWRTTQTGSPVLLYSGGMPRASYGDRHCLTIQQDKDHVTLDFTSRVIDFFTVHSTEPEKE
FDDPSALVVLLEEELVVIDLQTPGWPSLPTPYLAPLHSSAITCSCHISSVPPKLWERLVN
AGKAQQGRQHTHRSWPICGGKNLAPPPKQQELLLTGHEDGTVRFWDASGVALTPLYKLST
ANVFHTDCDPSEDPQDPSDDPDMQQEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYSNK
LVVAGTAGQVIVLGLSDERSDHLVDVSVVDLLQDREGFTWKGHDRLEPRLKPAPFPPGFQ
PLVLVQCLPPASVTAVALHAEWNLIAFGTSHGFGLFDYHRRNAVLARCTLHPNDSLAMEG
PLSRVKSLKKSLRQSFRRIRKSRVSGKKRTITTPTSKVQEANAALAEQEEVAPVQRRIEP
RSADDSLSGVVRCLCFADTFLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGTGRVCERGG
ASESSVCVEAVLGKEIQLMHRAPVVSICVLDGRGKPLPDPYEASQDLAITPDMTNAHSVL
IASEEQLKVFSLPKVSAKTKFKLTAHEGCRVRKVALVVFSSTAQEDYSEHTLVCLTNLGD
MHLFNIPGLRPQVRYDCIRKEDISGIASCVFTKNGQGFYLISPSEYERFSLSAKVITEPL
FSVQLDRPLEPTPASDGTTTQPQANGTHKNQMGQAEGQTEEPPSSLSSPILDTPLDSPLS
CADLTLDSTGELTVEDVRDFLTTVDEAENNLKNIKEEEGRSTGILIN
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggtttcgtcggcagggcactgacccgcagagagagaagataaaacag
gagcttttcgccttcaacaagaccgtggagcatgggtttccccatcagcccagcgctttg
gcctttgaccccaagctgcaactcatggccatcggcacaaaatcaggagccatcaaagtt
tatggggcccctggtgtggagttcacaggacttcacaaggacaccactgcagttacacag
atccacttcctgcctgggcagggccgtctgctgtcactcctggatgacaacacgattcac
ctgtgggagttggtggcgggggcccccagagaggtgggaggggttaagaaagagggtgtg
gtctccctccaagaagtgggcaactacagcctcccaggacgacctggcatcgagagctgc
agtgccacccgggtgactgtcctcctcttgctgaggtcatgtgacctgctctgcattgga
acagagggagggggcgtgtacttcctgcagttgccccgcctctcactgaaagacaaccat
acgcttcttcaggatcaggtcacgcagagcctgccagatgactacagatgtgggaaatcc
ttggggccggtggaatctcttcaggaacatcctcagcagtcagggaagattttgattggc
tacagccgaggactggtggtcctatgggatctgagcactcgtcacgcagaccagctcttc
ctgggcaagcagcagctggagagcctggtgtgggaacgcactggaaacttgtttgtcagc
tcccataacgatgggggctactctgtgtggcccgttaccagtggcaacacttgcagtcac
cagccagtgacctccaccatcccatatggtccatttccctgcaaggccatcagcaagatc
ctgtggaggacaacacagacaggttctccggtgctgttatacagcggagggatgcccaga
gccagctacggggaccgccactgtctgaccatccagcaggacaaggaccacgtcactctc
gacttcacatcacgagtcatcgacttcttcactgtccacagcacagagccagagaaagag
tttgatgacccgtcagcgttggtagtcctactagaggaggagctggttgtaattgacctc
cagacccccgggtggccctctctgcccactccctacctggctcctctccactcctctgcc
atcacttgctcctgccacatctccagcgtccctcctaaactgtgggagaggctggtcaat
gccggcaaagcacagcagggccgacaacacacacacaggagttggcccatatgtggaggg
aaaaacctggcgcccccacccaaacaacaagagctgctgttgacaggacatgaggacggc
actgttcgcttctgggatgcatcaggtgttgctctgactccgctgtacaaactcagcaca
gccaatgtcttccacaccgactgtgaccccagtgaagaccctcaggaccccagcgacgac
cccgacatgcagcaggaggaggaatggcctcccttcaggaaggtgggctgtttcgacccg
tacagcgatgacccccggctgggcatccagaagatcagtctgtgcaaatacagcaacaag
cttgtggtggctggaactgctggacaggtgatagtgttgggtttgagtgacgagcgttca
gaccacttggtggacgtgtcggtggttgacctgctgcaggacagggagggcttcacctgg
aagggccacgacaggctggagccacgccttaaacccgcccccttccccccaggcttccag
ccactggtgctggtgcagtgcctgcccccggcctctgtcacagcagtggcactgcacgcc
gagtggaacctgatcgcctttgggacaagtcatgggttcggcctgtttgactaccaccga
agaaacgcagtgctggccaggtgtaccctgcaccctaatgactcattggcgatggagggc
ccgctgtccagagtcaagtccttgaaaaagtccttacggcagagcttcagacgcatccgc
aagagcagggtgtcggggaagaaacgcaccatcaccacacccaccagcaaggtccaagag
gccaacgctgctttagcggagcaggaggaagtggctccggtacagcgaaggattgaaccg
cggtcagctgatgactcgctgtcaggagtggtccgatgtctttgcttcgctgacaccttc
ctgcgtgatggtacacaccacggccccacactatgggcgggcaccaactcaggcagcgtg
tacgcctacgctctggaggtgcccggcgtgggcacgggacgcgtgtgcgagcgtggcgga
gcgagcgagagcagcgtgtgcgtggaggcggtgttgggtaaagagatccagctgatgcac
agggctccagtggtgtcaatctgcgtactggacggccgggggaaaccactaccagaccca
tacgaagcctcccaggacctcgccatcacaccggatatgaccaacgctcactctgtcctc
attgcatcagaggaacagctcaaggtcttctctctccccaaggtgagtgccaagaccaag
ttcaagctgacggcgcacgaaggctgtcgagtgaggaaggtggccctggtggtcttcagc
tccacggctcaggaagactacagtgaacacacactggtgtgtctgacaaacctgggagac
atgcacctctttaacataccgggcctccgaccacaggtgcgctacgactgcatccgcaaa
gaggacatcagcggcattgcatcctgtgtctttaccaagaacggacaaggcttttacctg
atctctccttcagagtacgagaggttctcactgtctgccaaggtcatcactgagccgctc
ttctctgttcagctcgaccgaccactggagcccacacctgccagcgatggtacgacgacg
cagccgcaggccaacggaacccacaagaaccagatgggtcaggctgaggggcaaacagag
gagcctccgagctccctgtcctctcccatcctggacaccccgctggactcccccctcagc
tgcgccgacctcaccctcgactccaccggagagctcaccgtggaggacgtcagggatttc
ctaaccactgtggacgaagcagagaataacctaaagaacattaaagaggaggagggacgc
tcgaccggcatcctcatcaactga
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