Lates calcarifer (barramundi perch): 108881146
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Entry
108881146 CDS
T04895
Name
(RefSeq) hypermethylated in cancer 2 protein
KO
K24384
hypermethylated in cancer protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881146
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108881146
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_15
zf-C2H2_3rep
zf-Di19
Zf-C2H2_ZNF451
zf-C2H2_16
Pox_VERT_large
HGTP_anticodon2
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
108881146
NCBI-ProteinID:
XP_018528493
UniProt:
A0AAJ7PJR3
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Position
LG13:4132174..4150568
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AA seq
587 aa
AA seq
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MELPNHAKHLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSIYFKSLVLHDNLIN
LDTEMVNPSVFRQVLDFIYTGKLLSSSDQSSEQNFSALLTAASYLQLHDLAALCRKKLKR
SGGKPLPGKPSTPGPLSRLRLNNQRLSSSTPAGPNNHYPPTPSDADQPQPDEGLRDKLSD
DEMFVGSSGKNGNGGNGSSNGNLSSGGSAGEPDLGLDLSKKSPPSAGTATDALSPHSNSQ
ESPQSASVSTTNSASLDDSSTTLPGVDTCGSESMELNSSSKTSEETQNQLDGPPPQKKSR
QGARKNEWPKREASGLKSEDLDRPLVNGVIVGPKDGRSSGVGGGSGSSFTSDQSFQCKDE
EEGGENGQDHSDESGQSDGESAGGGGGTGGGHHSANYVYRQEGFEPAFGDNLYVCIPCGK
GFPSSEQLNAHVETHTEDELYIKEEGGTFVKEEDEEEAEDLSAPVGPSNFGSETRPFKCT
VCSKSYKDPATLRQHEKSHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGM
RFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaactgccaaaccatgccaaacacctgctgctgcaactcaaccagcagagagccaag
ggcttcctgtgtgatgttatcatcgtggtggagaatgcgctcttccgtgcccacaagaac
atcttggccgcaagcagcatctatttcaaatctttggtcctccacgataacctcattaac
cttgatacagagatggttaacccctctgtattcagacaagttctggacttcatctacact
gggaagctcctgtcctcatcggatcagagcagtgagcagaacttcagtgccctcttaacc
gcagccagctacctccagctccatgacctcgctgctctgtgcagaaagaagctcaagcgc
agtggtgggaaaccccttccaggtaaaccctccactccaggtccccttagccgcttacgc
ctcaacaaccagcgcctttcctcctctacccctgctggtcccaacaaccactatcctccg
accccttccgatgccgaccagccacagcctgacgaaggccttcgggacaagctctcagac
gatgagatgtttgttggcagctctgggaagaatgggaatggggggaatggcagcagtaac
ggtaacctcagcagtggaggaagtgctggggaaccagatcttggactagatctgtccaag
aagagccctccttctgcgggcacagccactgatgctctcagcccccacagcaactcccaa
gaatcccctcaatctgcctcagtatccacaaccaacagtgcctcactggatgactcctcg
accaccctaccaggtgtagacacctgtggctcagaatccatggagctcaattcttcttct
aaaacctcagaggaaacccaaaaccagctggatgggcccccaccccagaagaaatctcga
cagggtgctcgcaagaatgaatggcctaaaagagaggcatcagggttgaagtctgaagat
cttgacaggcccctggttaatggggtaattgtgggtcctaaagatggccgctcctctggg
gttggagggggaagtggtagcagcttcacctctgaccagtccttccagtgtaaagatgag
gaagaaggaggtgagaacggccaggaccacagtgatgagagcggacagagcgacggtgag
agtgcagggggtggaggaggaacaggagggggacaccacagcgccaactacgtgtacagg
caggaaggttttgagccagcattcggagacaacctctatgtgtgcattccctgtggtaag
ggcttccccagttctgagcagctcaatgctcacgtggagacacacactgaggatgagctc
tacatcaaagaggagggagggacctttgtgaaagaggaagatgaggaggaggcagaggac
ctctctgcccccgtaggtccctccaactttggctctgaaacgcgtccattcaagtgtaca
gtctgcagtaagagctacaaagacccagcaacgctgagacaacatgaaaagagccactgg
ctgaccaggcccttcccctgcaacatctgcggcaaaatgttcacccagaggggcaccatg
acacgccatatgcgcagccatcttggcctcaagccgttcgcgtgtgaagagtgtggcatg
cgcttcacacgccagtaccgtctgacggagcacatgcgtgtccactctggggagaagccg
tacgaatgccagctatgcggggggaagtttacccagcagcgcaacctcatcagtcacctg
agaatgcacacctcaccctcttag
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