Lates calcarifer (barramundi perch): 108881213
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Entry
108881213 CDS
T04895
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881213
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108881213
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
108881213
Nuclear receptors [BR:
lcf03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
108881213
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
DUF5134
FliG_M
ZnuA
Motif
Other DBs
NCBI-GeneID:
108881213
NCBI-ProteinID:
XP_018528575
UniProt:
A0A4W6D7X6
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Position
LG17:16941362..17008790
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AA seq
522 aa
AA seq
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MLPKVETESLGLSRSYGEQGHMPRNMQAPQLKMMDYSYDEDLDEMCPVCGDKVSGYHYGL
LTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCPYCRFQKCLTVGMKLEAVRADR
MRGGRNKFGPMYKRDRALKQQKKALIRANGLKIEAMSQVMQAVPTDLTITSAIQNIHSAA
SKGLPLSHHAGHHTGHHHHHHHHHATALPPTDYDRSPFVTSPVSMAMPPHAGSLQGYQAA
YGHFQGTRTIKSEYPDPYTSSPESIMGYAYVDAYQSGSPPSFPHLIVELLKCEPDEPQVQ
AKILAYLQQEQASRGKHEKLNTFGLMCKMADQTLFSIVEWARSSIFFRELKVDDQMKLLQ
NCWSELLILDHVFRQVVHAKEGSILLVTGQQVDYAVIASQAGATLNNLLSHAQELVAKLR
SLQLDQREFVCLKFLVLFSLDVKNLENFHLVESVQEQVNAALLDYVMCNYPQQTDKFGQL
LLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLLIEMLHAKRA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccaaagtcgagactgaatccctgggactctctcgatcgtatggggaacagggg
cacatgccaaggaacatgcaagctccccagttaaaaatgatggactactcttatgacgaa
gacctggacgagatgtgccccgtgtgcggagacaaagtttctgggtatcactacggactc
ctgacctgcgagagctgcaagggcttcttcaagcgcaccgtccagaacaacaagcgttac
acatgtatagagaaccagagctgccagattgacaagacccagaggaagcgttgcccatac
tgccgcttccaaaagtgcctcaccgtcggcatgaagctagaagctgtccgagcggaccgc
atgcgtggcggtcgcaacaagttcggcccaatgtacaaacgtgaccgggccctcaagcag
caaaagaaggcactgatccgagctaatggcttgaagatcgaggccatgagtcaggtgatg
caggccgtgcccaccgacctcaccatcacctcagccatccagaatatccactcggccgcc
tccaagggcctcccactgagccaccacgctggccaccacactggtcaccaccaccaccac
caccaccatcacgccaccgccctgccccccacagactacgaccgcagcccatttgtcact
tcgccagtcagcatggcgatgccgccgcacgccggcagcctacagggctaccaggcggcc
tacggacacttccagggcacgcgcaccatcaagtcagagtacccagacccgtacaccagc
tcgccagagtccatcatgggctacgcctacgtagatgcctaccagtcgggctcaccgccc
agcttcccccacctgattgtagagctgttaaagtgtgagccggacgagccacaggtgcag
gccaagatcctggcctacctgcagcaggagcaggccagccgaggcaagcatgagaagctc
aacacctttggccttatgtgcaagatggccgaccagacgctcttctccattgtggagtgg
gcacgcagcagcatcttcttccgtgaactcaaggtggatgaccagatgaagttgctgcag
aactgctggagtgaactcctcatccttgaccacgtcttccggcaggtggtgcatgccaag
gagggctccatcctactggtcactggccagcaggtggactatgcagtgattgcgtcacag
gcgggggccaccctcaacaacctgttgagccacgcccaggagctggtggccaaattgcgc
tccctgcagctggaccaacgggagtttgtctgcctcaagttcctagtcctcttcagcctg
gatgtgaagaacctggagaacttccatctcgtagaaagtgtccaggagcaggtcaacgca
gcgctgctggactacgtcatgtgtaactacccacagcaaacggacaagtttggccagctg
ctcctgcggctgccagagatccgagccatcagcctgcaggccgaagaatacctttactac
aaacacctgaatggcgacgtgccctgcaacaacctcctcattgaaatgctacatgccaag
agagcttag
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