KEGG   Lates calcarifer (barramundi perch): 108881225
Entry
108881225         CDS       T04895                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03020  RNA polymerase
lcf03420  Nucleotide excision repair
lcf04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108881225
  09124 Replication and repair
   03420 Nucleotide excision repair
    108881225
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108881225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108881225
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108881225
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108881225
  RNA polymerase III system
   RNA polymerase III
     108881225
  RNA polymerase I system
   RNA polymerase I
     108881225
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108881225
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 108881225
NCBI-ProteinID: XP_018528592
UniProt: A0A4W6D8T4
LinkDB
Position
LG17:complement(16584087..16587013)
AA seq 150 aa
MAGILFEDIFDVKDIDPDGKKFDRVSRLHCESESFKMDLVLDVNIQIYPVDLGDKFRLVI
ASTLYEDGTPDDGEYNPQDDRPSRADQFDYVMYGKVYKIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggctggaatcttgtttgaagacatttttgatgtaaaagacattgatccagatggcaag
aagtttgacagagtgtctcgtctacattgtgaaagtgaatctttcaagatggaccttgtc
ttggatgtgaacattcagatctatcctgttgatcttggtgacaagttcagactggttatt
gccagtacgttatatgaagatggaacaccagatgatggagaatataatcctcaggatgac
cggccatctagagcagaccagtttgattatgtgatgtatggaaaggtttacaagattgag
ggcgatgagacctcgacagaagcggccacacgcctctctgcctatgtgtcttacggtggc
ctcctcatgaggctgcagggagacgccaacaaccttcacggctttgaggtggactccagg
gtttacctcctcatgaagaaactggccttctaa

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