Lates calcarifer (barramundi perch): 108881236
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Entry
108881236 CDS
T04895
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108881236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881236
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108881236
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
RecO_C
Motif
Other DBs
NCBI-GeneID:
108881236
NCBI-ProteinID:
XP_018528615
UniProt:
A0A4W6D8B9
LinkDB
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Position
LG17:15898281..15921591
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AA seq
960 aa
AA seq
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MEITAEGEAEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYISPHLASHVEQFSHLEPVLSSGMQSAGESYKAERWLLHS
LQVHMVSAQLRPLLRHLGHTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKGPPCLGLLKSQSLCVLPGAGGAWRNRDSAPRAETLNRRLTTSNCSLREAVATSH
KPGSATGVGSQNSSSTNTTSPASSLGAPWVCVSRLGESERGVTPPPGPDPVPSISLTESP
TPTSLQPETGVDSGDGDYDDGPEYLAIGNLGQRSRRDSQSSTHSSEQGETPERPLERSSQ
APPPPRRSSFSEGQRGLGRGSRGHTRSFSDTGINQKLRNESAGDDCCMKEYSPFSPQSSD
SSTPSSLYMESHGSKYSNVPDGMFRKPSEGQSLISYLSEQDFGSCADLEKENAHFSISES
LIAAIELMKYNLRRQEEEGEEEGDSDCEIQQLKQKIRLRRQQIRRNRLPPCTTSQHFFHS
TDSGGSRRSSQDSYQGLSDSGSAEEVEECELRDGCEGQSLLAVSQNGLSLSLASLFSDAD
IKRSVSSSTRSFLSSESISPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEHDAP
QKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKIVVAKQN
YRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVSNFAR
DLLSKIAGDPLFNPNDINSGLYKKIKALEAVRVLRLQLFHMKNLFKTCRFAKEVLDQFDS
LPGHLTEDLHLFSLNDLTAVRNGELAPRMKELLKLGTTHVAGCVLCQAKGFVCEFCGNDK
DIIFPFQLNKCQRCEECHACYHRGCFRTGKDCPRCQRLAERRERMARKNMEEQEDEGGGS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggagatcacggcggagggagaggcagaggagcgcaggagggagcactggaagctgctg
tccagtctgaagaccacagtggagggtcttgtgtccaccaacaaccccaatgtgtggtca
cgctacggtggcctgcagcggctccacaaggacatgaataacatccttagccatggactg
aagaatgagcaggtgtactacaagcagagagactactggccgtttgtgtggtgtgttcgc
tacatcagccctcacctcgcctcacatgttgaacagttcagtcacctggagccggtgctg
agcagcgggatgcagagtgctggtgaaagctacaaggccgagcgctggctgcttcacagt
ttacaggttcacatggtgtcggctcagctcagacctcttctcaggcatctgggacataca
cgtaaatactataatgatgatgcctttctgctgagcgagccccacgtcaccgccatgttt
cagtgtctggaagctgtggagcagaacaaccccaaactgctggcccaagtagacactgtt
gggctgtcccctctgaagggtccaccatgtctaggtctgctgaagagccagagcctgtgt
gtgttgccaggggcaggtggggcctggaggaaccgtgactcggcgcccagagcagaaact
ctaaaccgcaggctcaccacctccaactgctctctgcgagaagcagtcgccaccagccac
aaacccgggagcgctacgggagtcggatcccaaaacagcagcagcacaaacactacttct
ccagccagcagcctaggagctccctgggtgtgcgtgtccaggctgggggagagcgagcgg
ggtgtgactccacctcctggcccagaccctgtcccatctatctccctcacagagtcccca
acgcccacttcccttcagcctgagaccggtgtggactctggtgatggcgactatgatgac
ggtccagagtacctggcaatcggtaacctggggcaacgtagtcgccgtgactcccaaagc
tccacccacagtagcgagcagggcgagaccccggagcgccccctggaaaggagttcccag
gccccgcccccacccaggcgttcatctttttcagaaggccagagggggctgggccggggg
tcccgaggacacacccgctcattttctgacacagggatcaatcagaaactcaggaatgaa
tcggcaggcgatgactgctgtatgaaggaatacagccccttctcacctcagtccagtgat
tccagcacccccagttccctctacatggagtctcatgggtccaagtacagcaatgtccca
gatgggatgttcaggaagccgtcagaaggccagagcctcatcagctacctgtcagagcag
gactttggcagctgtgctgaccttgaaaaggagaacgctcatttcagcatttcagagtcc
cttattgcggccattgagctgatgaagtataatctgcggcgtcaggaggaggagggcgag
gaggagggagacagtgactgtgagattcagcagctcaaacagaagatccgcctgcgcagg
caacagatccgccgcaaccgcctgccgccctgcaccacatcccagcacttctttcattcc
actgacagcggaggctccaggaggagctcccaggactcataccagggcctgtctgactcc
ggctcagctgaggaggtggaggagtgtgaactaagagatggctgtgagggtcagtccctg
ctggcggtgtctcagaacggcctctccctgtcactcgcctccctcttctcagatgcagac
ataaagcgcagtgtgagctccagcaccaggtcttttctcagctccgagtccatctctcca
tccttcctccagtctaactctgctgagtcagtagccatgggtttgctcaggcagtttgag
ggcatgcagcttcctgcagcctcggagctcgactggctggtcccagaacacgacgctcca
cagaagctgctgcccatcccagactctctgccgatctcacctgatgacggtgaacatgca
gacatctacaagttgaggattcgggtcagaggcaacctcgagtgggcaccgcctcgaccg
cagatcatcttcaacattcaccctgcccccaagaggaagatagttgtggctaaacagaat
taccgttgcgccggctgtggcacccgcatcgacccagattatattaagcgactgcgttac
tgtgaatacctcggccgttacttctgccagtgctgccacgagaacgcccaggcagtggtt
cccggccgagtgctgagaaagtgggactttagcaagtactatgtcagcaactttgcccgg
gacttgctgagcaagatcgcgggagacccgctgttcaaccccaatgacatcaacagtggc
ctgtacaaaaagattaaagcactggaggctgtcagggttttgaggctgcagctgtttcac
atgaaaaatctcttcaagacctgtcgttttgctaaagaggtgctcgaccagttcgacagc
ctgccgggtcacctaactgaggaccttcacctcttctccctcaatgacctcactgctgtg
cgcaacggggaactggctccccggatgaaagagctgcttaaacttggtaccacgcacgta
gctggctgtgtgctgtgccaggcgaagggtttcgtgtgcgagttctgcggcaacgacaaa
gacatcatcttccccttccagctgaacaagtgccagcgctgcgaagagtgtcacgcgtgt
taccatcgcggctgcttccggacaggtaaagactgtcctcggtgtcagcgactggcggag
cgaagagagaggatggcgcgcaaaaacatggaggaacaggaagacgagggaggtgggagc
tag
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