Lates calcarifer (barramundi perch): 108881260
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Entry
108881260 CDS
T04895
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00260
Glycine, serine and threonine metabolism
lcf00270
Cysteine and methionine metabolism
lcf00450
Selenocompound metabolism
lcf00670
One carbon pool by folate
lcf01100
Metabolic pathways
lcf01230
Biosynthesis of amino acids
Module
lcf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108881260
00270 Cysteine and methionine metabolism
108881260
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108881260
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108881260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108881260
Enzymes [BR:
lcf01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
108881260
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108881260
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
108881260
NCBI-ProteinID:
XP_018528648
UniProt:
A0AAJ7LRC3
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Position
LG17:complement(15187753..15198521)
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AA seq
409 aa
AA seq
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MDQKHTQDEQNDVSVGFRTAFKSFATEAIHVGQEPEQWKSMAVVPPISLSTTFKQHGPGK
HAGFEYSRSGNPTRNCLEKAVAALDGAKYCLALASGLAATVTITHMLKAGDGLVCMDDVY
GGTNRYFQRIAAEVGLEVSFADCTKPELLKAALKPNTKLVWIETPTNPTMKVVDIRACAD
LVHEHNKDIVVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSVNREDLY
ERLKFLQNALGGVPSPFDCFLCNRGLKTLHLRMERHFKNAMAAAKFLEADPRVERVIFPG
LRSHPQHEVMKRQCTGCPGMITFYIKGKLEHATTFLNSLKMFAVAESLGGYESLAEHPAI
MTHASVPENERSVLGISDTLIRLSVGLEDEADIIADLEQALAAAHPKKE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaagcacacacaagacgagcagaacgacgtgtccgtcggtttccgcacggcc
tttaaatcgttcgccacagaggctattcacgtcggtcaggagcccgagcaatggaagtca
atggctgtggtgccgccgatttccctctctaccacgttcaagcagcacggaccgggaaaa
cacgccgggtttgaatacagtcggagtggaaatcctacaagaaactgtcttgagaaggct
gtggcagctctggatggagcaaagtactgcctcgctctcgcctcggggctggcagccact
gtgaccatcactcacatgctcaaagcaggcgatgggctcgtctgcatggatgacgtgtat
ggaggcacaaaccgctacttccaaagaattgccgctgaagttggcctggaggtgtctttt
gctgattgtacaaagccagagctgcttaaggctgcactgaagcccaacactaaactggtg
tggattgagacgcccaccaaccccacaatgaaggttgttgacatcagggcctgcgccgat
ttggtccatgagcacaacaaagacatagtggtggtcgtggacaacaccttcatgtctgcc
tacttccagcgccccttggctttgggagctgatatctgcatgtattcagccaccaaatac
atgaatggtcacagtgatgtggtaatgggtctggtttcagtgaaccgagaggatctgtat
gagcgactgaagtttctgcaaaatgccctggggggcgtaccatctccctttgactgcttc
ctgtgtaaccgtggactgaagacgctacacctgcgtatggagcggcacttcaagaatgcc
atggccgctgccaagttccttgaggctgatcctagggtggagcgggtcatcttcccaggt
ctgcgctctcaccctcagcacgaagtgatgaagagacaatgcactgggtgtccaggaatg
atcaccttctacattaaggggaaactggagcacgccaccaccttcctcaatagcctcaag
atgtttgcagtagctgagagtctcggtggttatgaaagtttagcagaacatccggcaatt
atgacccacgcgtcagtgccagaaaatgaaagaagtgtgctggggatcagcgacactctg
atccgtctctctgtgggactggaggatgaagccgacattattgcagacctagagcaagcg
cttgctgctgctcatccaaagaaggaatga
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