Lates calcarifer (barramundi perch): 108881261
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Entry
108881261 CDS
T04895
Name
(RefSeq) prostaglandin E2 receptor EP3 subtype
KO
K04260
prostaglandin E receptor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108881261
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108881261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108881261
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Lipid
Prostaglandin
108881261
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srbc
7TM_GPCR_Srv
DUF7649
Motif
Other DBs
NCBI-GeneID:
108881261
NCBI-ProteinID:
XP_018528649
UniProt:
A0A4W6DU29
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Position
LG17:15131610..15139128
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AA seq
377 aa
AA seq
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MTADGCDSLEVIQTTAAEMLDSNVSTKMLREDNVTKNSSCSSVSVGYPITMMITGMVGNS
LALILVCISYRKKENKRKKSFLLCIGSLALTDLFGQLVTSPIVISVYRAGMNWDRIDQSG
ALCHFFGVCMTTFGLCPLFLASAMAIERAIAITNPHWYSNHMKTSVTKKTLAFIWLLVLL
FALLPIAGVGKYTRQWPGTWCFISTGDREVKGNMFFAVTFAVLGILSLLLTLSCNVLTIR
GLIIRCKTKSGTSQTSRQWERLTTETVIQLLGIMCVLLICWSPLLMLMLRMISTQVSSSA
CSSTHTPGHLDCDFFLMAIRLASLNQILDPWVYLLLREILLRKFCLMANAVSNCSTDDHK
EIQTALAQEVPGEKQPS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggacggttgtgattctctagaggtcatacaaaccaccgctgcagagatgctg
gactccaacgtttccacaaagatgttgcgcgaggacaatgtcaccaaaaattccagctgt
agctctgtatcagttggttatcctataaccatgatgatcactggcatggtgggcaactcg
ctagccctcattctggtgtgcatctcgtacagaaagaaggaaaacaaaaggaaaaagtcg
ttcctgctttgcatcggatcgctggcgctgaccgacctgtttggacagcttgtgacgagt
ccgatagtgatatcagtttacagagcgggtatgaactgggaccgcattgaccagtcgggc
gcactgtgccatttcttcggcgtgtgcatgacaacttttggcctgtgcccgctcttcttg
gccagtgccatggcgatcgaaagggctatagcgataacaaacccgcactggtactccaat
cacatgaagaccagtgtcacaaagaagactttggccttcatatggcttcttgtgctactc
tttgcgttgctgcccatcgcaggagtcgggaaatacacacggcagtggccgggcacctgg
tgctttatcagcacaggggacagagaagtaaagggaaatatgtttttcgctgtcactttc
gccgttcttgggattttgtctctgcttttaactctttcctgcaacgtattgacgatccgg
ggcttgattatccggtgtaaaacaaagtctggcacgtctcagacttcaaggcaatgggag
agactcaccacggagaccgtcattcaactgttagggattatgtgcgtcctgctcatatgc
tggtctcctctgctgatgctgatgctgaggatgatctccactcaggtgtcctccagtgcg
tgcagttccacccacacccctggccatttagactgtgacttctttctgatggcgatccgc
ttggcctccctcaaccagatcctggacccgtgggtctatctgctactcagggagatcctc
ctccgcaagttctgcctcatggccaacgccgtgtccaactgctccacagatgatcacaag
gagattcagacggcactggcacaagaagtgccaggagagaaacaaccttcataa
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