Lates calcarifer (barramundi perch): 108881284
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Entry
108881284 CDS
T04895
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108881284
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108881284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108881284
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
108881284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
108881284
NCBI-ProteinID:
XP_018528708
UniProt:
A0A4W6FBE4
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Position
LG17:14319472..14327363
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AA seq
584 aa
AA seq
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MPESSLVKDIHSSSTECRASPLRQFSQSSLPLHRNSYTLSTFCTEHNVQECLSHINQEMS
SLGLPPVWTESASNSELNVVVVLNCMYDLIQLHRRGVRTLENMEVEQLKSSSNVDYLQLT
STRLKEQLELSKRENTGLLERERQLQLKVKSLQNLLKNEKEEVQKLQNIIASRASQYNHE
MKRKEREFNKLKERLNQLLVDKKEKKQAIDVLNSIGRADGKRSLWKTEKTEAKHEGEMYK
TLLSDYDTRQRELVLENAELRKVLQQMKKDMVSILSSRKQTLKGDKHEDCCIQADSEDEE
EVFDSSTGSVDLYCVHAREKLTNSIRLQWRRLKSHVERLDSQASLAQIGESRNSDAVPRE
THEEEMHRLKLEIQQCKDFIQTQQQLLQQQLSSPCDEETASLLSDCFMLQEKERLREEWK
TLEEQRKIFERERRNFTEAAIRLSHERKAFEEDRAMWLKHQFLNLSPFADSKKSQLSKSK
SAFLIPAETQAGAGSAPEKLMKCPSDTTSPTHRCVPPTSPSTTDLCRTFCLISENSSTKP
KTKTEHAEESSVFCNGNVPVQHKRWNNSKDHSSHTLTREKNSSI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccagagtcctccctggtcaaggacattcacagcagctccactgaatgtagagcatcc
cccttgaggcagtttagccaatcatcgctgccactgcacagaaactcctacacactcagt
accttctgcacagagcacaatgtacaagaatgtctatcacacatcaatcaggagatgtca
tcccttggtctcccaccagtttggacggagtcagccagcaactcagagctaaatgttgtg
gttgtgctaaattgcatgtatgacctcattcagctgcaccgcaggggcgtccgaaccctg
gaaaacatggaagtggagcagcttaagtcaagcagcaatgtggactacctgcagctcacc
agcacccggctaaaggagcagcttgaactttccaaaagagaaaacacaggactccttgag
agagaacgacagctacagctgaaagtgaaaagtttgcagaacctcctgaaaaatgaaaaa
gaggaggtgcagaaacttcagaatataattgcaagtcgggccagtcagtacaatcatgag
atgaaaaggaaagaaagagaattcaacaaactgaaagagcgtctgaatcaacttctggtt
gacaaaaaggagaagaaacaagccattgatgtattaaacagcattggaagagctgatggg
aagagaagcctttggaaaactgaaaaaacagaggcaaagcatgaaggggagatgtataag
actctgttgagtgactatgacacccgacagagggagctggtgctggaaaatgcagagttg
aggaaagtgctgcagcagatgaaaaaagatatggtgtccattttaagttcaaggaaacag
actctgaaaggagataagcacgaagattgctgcattcaggccgactccgaggatgaggag
gaggtgtttgattccagtacaggaagtgtagacctgtattgtgttcatgctcgggagaag
ctgaccaacagtattcgcctccagtggagaagactcaagagccatgtagaaagactggac
agccaagcatctttggcacaaattggtgagagtagaaactctgatgctgttccacgagag
actcacgaggaggagatgcacagactaaagttggagattcagcagtgcaaagactttatt
caaacacaacagcagctgctgcagcagcagctcagctctccatgtgatgaggagacagcg
tccctgctgagcgactgcttcatgttgcaggagaaagagcgcctcagagaggagtggaaa
acccttgaggaacagagaaagatatttgagagggagaggaggaactttacagaagcagcc
ataagactgagccatgagagaaaggccttcgaggaggatcgcgcgatgtggctcaaacac
cagtttttaaacttgagtccatttgcagactcaaagaaatctcaactgtcaaagtctaaa
agtgcctttttaataccagctgaaacacaggcgggtgcagggtcagctccagaaaagctc
atgaaatgcccgtctgacacaacctcccccacacacagatgtgtcccaccaacatcacca
tccacaaccgacctgtgtcgcacattttgccttatctccgaaaacagctcaaccaaacca
aagacaaagactgagcatgctgaggaatcaagcgtcttttgtaatggaaatgttccagtt
cagcacaaacggtggaacaacagtaaagaccacagcagccacacactcacacgggaaaag
aatagctctatttga
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