Lates calcarifer (barramundi perch): 108881300
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Entry
108881300 CDS
T04895
Symbol
pex5la
Name
(RefSeq) PEX5-related protein isoform X1
KO
K13342
peroxin-5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108881300 (pex5la)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881300 (pex5la)
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108881300 (pex5la)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_19
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_11
TPR_16
TPR_12
TPR_9
TPR_20
ANAPC3
DUF4315
Motif
Other DBs
NCBI-GeneID:
108881300
NCBI-ProteinID:
XP_018528736
UniProt:
A0A4W6FGG7
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Position
LG17:14072948..14163632
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AA seq
622 aa
AA seq
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MYQGHLQGKDSRAADKTVAMVLKEIPSKASSEGKPLLTVTTKLVSEQQESRPLLSPSIDD
FLCETKCDGVSRPVTSNTAVLSSTLDLLDLSEPGERRNSKDRKSPLTSRGNIQRNNPHRK
KTDETELIQVEVEQTGPSMRTPERASLDSVTIGSPLDKWEELNPNPERNGNRKWKLERRR
SSKNSSNEFLWSIDCKTQLEPSNKNSLEANTKVEPESALASQLNRQYISGRHARLTKEQR
WGSALLSRHQSLEEEFERAKAAVESDTEFWDKMQAEWEELARRNWLTENEQAQIPSSVSP
HEKGYYFHTDNPYKDLPNAFEEGLKKSREGDLPNAVLLLEAAVLQDPHDSEAWQVLGTTQ
AENENEQAAIVSLQRCLELHPNNLPALMALAVSLTNTGMRNDACEALLRWLRHNPKYKHL
LKGKPHLMGSPNSQRRMSYAPNMNRHESSLLPEAKELFLEAVQHNSDSIDPDLQTGLGVL
YNLSEEFNKAVEAFNTALSVRPEDYLLWNRLGATLANGDRSEEAVEAYTRALELQPGFIR
SRYNLGISCINLGAHREAASNFLTALSLQRKSRSRQQSHQVMSGNIWAALRIALSMMDQP
ELFQAANIGDLDLLMRAFNLDI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggggcatttacaggggaaagactctagggctgcagataagactgttgccatg
gtcctgaaggagataccaagtaaggcgtcatcagaagggaagcccctcctcacagtgact
accaagctggtgagtgagcaacaagagagccgcccgcttctaagcccttccatcgacgat
ttcctctgcgagaccaagtgtgatggggtttcccgcccagtgacttccaacacagctgtt
ctgtcttcaacactggacctgctggacctcagtgaacctggcgagaggaggaacagtaag
gacaggaagagccccctgacatcccggggcaacatccagaggaacaaccctcacaggaag
aaaacggatgagactgagctgatccaggtggaagttgaacagacaggaccaagcatgaga
accccagagagagcatcactagactcagttaccattggttctccattggataaatgggaa
gagctgaaccctaacccagagagaaatggcaatagaaaatggaaattggagagacgacgt
tcatctaaaaattcatcaaatgaatttctgtggtccatagactgtaaaacccaattagag
ccatcaaataagaactccttggaagcaaataccaaagtcgagccagagtctgccctagca
tcgcaactcaacaggcagtatattagtggaagacatgctcgtctaacgaaggagcagcgg
tggggcagcgccctcctgtccagacaccagtccctggaggaggagtttgagcgagccaag
gctgctgttgagtctgatactgagttttgggataagatgcaagcggagtgggaagagctc
gctcggcggaactggctgacagagaacgagcaggcgcagattccctccagtgtctcgcca
catgagaagggttactacttccacacagataatccttataaggacttgcccaatgcgttt
gaagagggactaaagaagtctcgggagggagacttgccaaacgctgtgcttttgctagaa
gcagctgtcttgcaggaccctcatgattcagaggcttggcaagtgttggggaccacccag
gctgaaaacgagaatgagcaggcagcgattgtctccctccagaggtgtttggaactccac
ccaaacaacctcccggccctcatggctctggcagtgagcctgaccaacactggtatgcgc
aatgacgcctgcgaggccctgctccgctggctgcggcacaatccaaagtacaagcacctg
ctgaagggcaagccccacctgatgggatccccgaactcccaacgcaggatgtcatatgct
cccaatatgaacagacatgaaagctccctgctacccgaggccaaggagctcttcctggaa
gcagttcagcacaactcggacagtatcgacccagatttacagacaggcctcggggtgctc
tacaacctcagcgaagagttcaacaaagctgtggaggccttcaatacggccctgtcagtg
cggcccgaggactacttgttgtggaaccgcttgggagccacgctggcaaacggggaccgg
agcgaggaggcagtggaggcttacacacgagctctagagctgcagccagggtttatcagg
tcccgctacaacctgggcatcagctgtattaacctgggggcacacagagaggcagccagt
aacttcctgactgccctaagccttcagaggaaaagccggagtcgccagcagtcccaccag
gtgatgtccggaaacatctgggctgctctgaggatagctttatccatgatggaccagccc
gagctcttccaggccgcaaacattggagacctggatcttctcatgcgggccttcaaccta
gacatttga
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