Lates calcarifer (barramundi perch): 108881304
Help
Entry
108881304 CDS
T04895
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X3
KO
K25949
coiled-coil domain-containing protein 50
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881304 (ccdc50a)
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108881304 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
HydF_dimer
Motif
Other DBs
NCBI-GeneID:
108881304
NCBI-ProteinID:
XP_018528743
UniProt:
A0A4W6FHJ0
LinkDB
All DBs
Position
LG17:complement(13989363..14009378)
Genome browser
AA seq
645 aa
AA seq
DB search
MAECNISIDQNKLPGVKEVCRDFAVLEDHCLAYNLQEQEIESHLASNVHKSRLVQKDLQV
AKKLQEEEDKRAKIHSQKQHCDIERQDNEIAQEIQEELVRQAEQQRQQEEKDAAIARKLQ
EKEMKEERRRQKQLEANFEEEYFEDHGAARRPLDLDKRTRHKSTSPSRYDPYAPVSSHRD
YSPDYSSTEPKRSRYPRQDPAAPHSRSRYPEHYLGTEGGRSRHADPYPEHLLPSRGKHGD
RYPEYEPTATGRARDERGEETERVVRRKERPARPPPPQMAKERDKAGGRERDRHRDRDRD
RDLEWERHVGKDQRRDRAQDYMGERAGGRDRERSRDRGLSGDRHGERDRQRQKNKDRPQA
RTRSKERGLDVDYLEQGPSRDWPREGRASWEEEEDDGERERRARGRQRVHSGPEEVFDEP
RSDEGRGWTGELWDPQQGEGPGRERIHTYPSGETGRIVHRGSGAVVAETEYGLSEATKGL
TKLDLREQELKDMEVARKLQEEEIKVGKETRQASKVHMRAAQVAQDEEMARLLMEQEKKE
YKKNREREKEKERERERLAMERMAMERRRQETDYRPTSEEVVRPRTRDEYEYQRQRNHNK
PARPPQPRAHDYENVNPGFGYSNHPVPPRAPTRPEAAYKGAYYKR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtaacattagcatcgaccagaataaactacctggagtgaaagaggtgtgc
cgagactttgctgtgctggaggaccactgcctggcctataacctccaggagcaagaaatt
gagagccacttggcgtccaacgtccataagagccgtctggtgcagaaggacctgcaagtg
gccaagaagctgcaggaggaggaggataagagggccaagatccatagccagaagcagcac
tgtgacattgagcgccaagataatgagatcgcccaggaaattcaggaagaactggtccga
caggcagagcaacaacgacagcaggaagaaaaggatgcggctatagctcgtaagctgcag
gagaaggagatgaaagaggagaggaggagacagaagcagctggaagcaaactttgaggag
gaatactttgaggatcacggagcggcaagaagacctcttgatttggataaacgcactcgt
cacaaatcaacttccccaagccgatatgacccatatgctccagtgagctcacatcgtgat
tactccccagattatagctcaactgagcccaaaaggagcaggtacccaagacaggaccca
gcagcaccccacagtcgctccagataccccgagcactacctggggacagagggagggcga
agcaggcatgcagatccgtacccagaacacctgctgccctccagaggcaagcatggggac
aggtacccagagtatgaacccacagcaactggcagagcccgggacgaacggggggaggaa
acggagagagtggtgaggaggaaggagagaccagccagaccgcctccaccacagatggcc
aaagaaagagacaaggccgggggcagagaaagggacaggcatcgtgaccgagacagggac
agagacctggaatgggagaggcatgtgggaaaagaccagaggagagacagggcgcaggac
tacatgggggagagagcgggaggaagagacagggaaagatccagagatagaggactgagt
ggggacagacacggagagagagacaggcagagacagaaaaacaaagacagaccacaagca
agaacccggagcaaggagagaggacttgatgtggattatttggagcagggtcctagcagg
gactggccgagggagggcagagcttcctgggaggaggaagaggatgatggtgagagggag
aggagggccaggggccggcagcgtgtccactctggcccagaggaggtgtttgacgagccc
aggagtgacgaagggagagggtggaccggggaactctgggaccctcagcagggggagggt
cctggcagggaacgcattcatacttaccccagcggagagacaggtcgtattgtccaccga
gggagtggagcagtagtagcagaaactgaatatgggctgagcgaggccacgaaggggctg
acaaagctggatctccgtgagcaggagctaaaggacatggaggtggctcgaaaactgcag
gaggaggaaatcaaggtggggaaggaaaccagacaggccagtaaagtgcatatgcgcgca
gcccaagtagcgcaggatgaggaaatggcccgactgctgatggaacaagagaaaaaggag
tacaagaagaatcgagaacgggagaaagagaaggaacgagagcgggagaggttggccatg
gagaggatggcaatggaaaggaggcggcaagagacagactacaggccaacttcagaggaa
gtcgtccgacccagaacacgagatgagtacgaataccagaggcagaggaaccacaacaag
cctgccaggcctcctcagcctcgagcacacgactatgagaatgtgaaccctggcttcggg
tactccaaccatcctgtccccccacgtgctcccaccagacctgaggctgcttacaaaggt
gcctattacaagcggtga
DBGET
integrated database retrieval system
