Lates calcarifer (barramundi perch): 108881306
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Entry
108881306 CDS
T04895
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecules
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108881306
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108881306
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108881306
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108881306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108881306
04147 Exosome [BR:
lcf04147
]
108881306
04515 Cell adhesion molecules [BR:
lcf04515
]
108881306
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108881306
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108881306
Exosomal proteins of colorectal cancer cells
108881306
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
L1 family
108881306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
DUF7544
GPDPase_memb
DUF996
Phage_holin_2_4
DUF2254
DUF308
DUF898
DUF6232
Motif
Other DBs
NCBI-GeneID:
108881306
NCBI-ProteinID:
XP_018528745
UniProt:
A0A4W6FGM1
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All DBs
Position
LG17:complement(13977297..13979534)
Genome browser
AA seq
203 aa
AA seq
DB search
MASSGMQLLGFFLALVGLAATVAATFMVEWKKQAQGKTYRIYEGLWMSCSGNERTTCEFH
ESLLKLPSEVQATRAVMLLSIFLSAVALLVSTVGMKCTRFMDSKVESKSTTAMIGGIMFI
VAGLLTLIITSWYVKMIVQTFYESHRLQSFEFGKAVFVSWAGGLLTMAGGVFLSCRRCSR
SERDESISSNHLLPTSSSKSNYV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcgggaatgcagctcctcggtttcttcctcgctctcgtgggtctcgctgcc
accgttgccgctaccttcatggttgaatggaagaagcaggcgcagggcaagacgtaccgc
atatacgagggcttgtggatgagctgcagtggcaatgagagaacaacctgtgaatttcac
gagtctctgctgaaactcccaagtgaagtccaggcaaccagggcggtgatgctgctgagc
atcttcctctctgctgtggcgctgctggtctccacagtgggaatgaagtgcacccgcttc
atggacagcaaggttgagagcaaatccaccacagctatgatcggaggaatcatgttcatt
gttgcaggtttattgaccctcatcatcacctcctggtatgtcaagatgattgttcagacc
ttctatgaatcccaccgtctacaaagctttgagtttggtaaggcagtgtttgtcagctgg
gccggtggcctcctcactatggccggtggcgttttcctgagctgtcggcgatgctcgcgg
tcggagagggacgaatccataagctccaaccacctcctgcctacctccagctccaagtcc
aactatgtctag
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integrated database retrieval system