Lates calcarifer (barramundi perch): 108881337
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Entry
108881337 CDS
T04895
Name
(RefSeq) unconventional myosin-IXb isoform X1
KO
K10360
myosin IX
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108881337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881337
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108881337
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108881337
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108881337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
RhoGAP
RA
IQ
C1_1
AAA_22
nSTAND3
C1_2
Motif
Other DBs
NCBI-GeneID:
108881337
NCBI-ProteinID:
XP_018528793
UniProt:
A0AAJ7LR78
LinkDB
All DBs
Position
LG17:13340052..13394089
Genome browser
AA seq
2331 aa
AA seq
DB search
MSVRDGAATMATNAGGGGGGGGPANPNDHDGRSYLLQIYPRLAAHPSTCCNLRVQKDATA
ASVISDAATALGLDPGRLYVLAEVKESGGEEWVLEAGDLPVQRFLLWPRKAQEEHPQSLG
FYFLLQERNHDGSIHYVHLPPVSKEQEAQRLAARGFLPPPQDDFADLCNLPVLNEDRILN
NLRTRFYKKKIYTYAGSILIAINPFKFLPIYNPKYVKMYENHQLGKLEPHIFAIADVAYY
AMLRKRVNQCIVISGESGSGKTQSTNFLIHCLTALSQKGYASGVERTILGAGPVLEAFGN
AKTAHNNNSSRFGKFIQVNYLESGVVRGAVVEKYLLEKSRLVSREKNERNYHVFYYLLLG
ASEEERKEFKLLPPEEYFYLKQQNFKIEDEEDLRHDFERLQQAMEMVGFLPATKKQIFSV
LSAILYLGNVTYRRKSTGRDEGLDVGPPEILATLSDLLKVKEELLVEALTKRKTVTVNDK
LILPYSQSEAITARDSMAKSLYSALFDWIVLRINHALLNKKDMEESVPCLSIGVLDIFGF
EDFETNSFEQFCINYANEQLQYYFNHHIFNLEQEEYQAEGITWHNIDYTDNVGCIHLISK
KPTGLLYLLDEESNFPHATDETLLAKFKQQHQGNKYFVPTPVMEPAFVIRHFAGKVKYQI
KDFREKNTDHMRPDIVALLRSSDRAYVRQLIGMDPVAMFRWGILRATIRGIAAFNEAGRS
WAAKTSGVVRPISRTPLGELQRSNAPIERMYKRASMLDFYFDHSEERPLEAFEDIFASYE
SKKDMHAEIISSIKNLQLDGEDPRKLLQSWGRLRFPRHVLQKNKTTKQKQVIPKSLLDSR
SLKFIVSLTLHDRTTKSLLHLHKKKKPPSISAQFQTSLTKLLETLNRAEPFFIRCIRSNA
EKKEMYLDEALVVQQLRYTGMLETVRIRRSGYGAKYTFQEFIEQFRVLLPKTATACKEDI
SVLLDKKMGLDPTTYQIGKTKVFLKELERQQLQDTLHKDVIRKIIFLQRWFRACLQRKEF
MDMRQAAILIQRSWRRYCKEERRQHAATLIQAVWRGHRQRLEYHRQRQGATKIQALVRGH
SARRRCQSMREDKRRMEEEEKEAQRRAEEEERRRREEEEEARRKAEEEEEARRRMEEEAR
RKEEEEEEARRRAEEEEAAREEHEAKKKREEERLAREPQTREDPDIELVTEEMLDDNLPV
QETEEERGEEDEEVKSSSHTEEEEQEKDEELEDEDEELNLETNGTAAEAGPQPDEKEEEE
DLDTRGLPSDGVTSNALTPTSPGKASDKQAPSTTSTPSKAEQNRVRPPANRGQSSRSQEK
REQRRRRGLEHNQRETDRAASSSSFSSAIGKDQTSPPKSKSQESPKLKERSDSKELDQYT
FVAWKMKEDKGGKKEAKTSPPPPASGPVRPSTLSLQPADPAPERNGLGEGGGAVNLQRRP
GAIKEKPEKWRGRRSNGEYSERNSPPPPHNREERRKKQPLSETASSSIDSLSPGSEGAGA
VSAREFISPSDSHGDGSKGSSFRRRQQEGSGHPDSAHSMPSTPDRPGGFFSKILKKRPHK
EAQTPDNGELTLAQILNERPTGGEAPTSGHPSRPLSQPHSDRKGVGRNPSIKISRATRVS
EQWNASLDREITNANELRHLDEFLGNQVNDFRSRGKSLSATEAIFVTATMQFRENIKAMY
SLTKPTIGYKALMTSYQNKVIHLASDKQKGEVQLVVNLFQSVLDGFIRGEMKKEEAEPAK
PAKARKKRRKKDKSMESPLDHGFVNYQVNIMQSCDQCSSYIWGMEKAYMCSYCKMVCHKK
CICKITADCSTFCAKKSDEDSGGQHFGVRVCHLVSDKNPVPMVLEMMLEHVEMHGLYTEG
IYRKSGSANRIKELHQRLETDPHQVCLEDYPIHTVTGLVKQWLRELPDPLMTFTHYNDFL
HAVELPEKQEQLHAIYKTLEELPTANFNTLERLVFHLVRVCKDEAHNRMSPNSLAIVFAP
CILRCPDSADPLLSMKDVAKTTTCLEMLINEQIRRYNEKMEEIEQLEYAEALAVNQLKLK
RQNTHYWHLPLRFSAPYKGVVVHEKVSSDLSVVPENEPLDSDTEAEKNLVERIKSIKQEK
EDLACRLPEMEQPGSDQENLDSEASLSSESLLDEQQRSSAHSSEPEGRGGFQLKRFRPVC
PPKPPDLAQRPKILIGRVSLSNLTPASSTSSVSSCASSTSESSSASLRHLLQRRNPVIPD
TVKLPPGVLSQSAASSLAQTYTPPMNRAFKNVVRRREQPGRRKDSTQSLYIDSPECDLLL
HFSSCPPSASSSSSSISLVTRSPQEQHHDARAPKGQRRFSDPDIPYAEEDV
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagagatggcgctgccaccatggcaacgaacgcaggtggaggaggaggggga
ggtgggccagctaaccctaacgatcacgatggccgctcatacctgctccagatctaccca
cggctggctgcccatccctccacctgctgcaaccttagagtgcagaaggatgcaacagca
gcctctgtgatctcagacgctgccacggcgctggggctggaccctggtcgtctgtatgtg
ctggcagaggtgaaggaaagtggtggagaagagtgggtgctggaagccggagacctgccg
gtacagaggtttctgctgtggcctcggaaggcccaggaggaacaccctcagagcctcggc
ttttacttcctactacaggaaaggaaccatgatggctctatccattatgttcacctccca
cctgtgtccaaggagcaggaggcacagcgactagccgccaggggcttccttccacctcca
caggacgactttgcagacctctgcaacctccccgtcctcaatgaggacaggatattaaat
aacctgcgcacacgcttttacaagaaaaagatctacacctatgcaggcagcatcctcatt
gccatcaaccccttcaagttcctgcccatatacaaccctaagtatgtcaagatgtatgag
aaccaccagctgggcaaactggagcctcatatctttgctatcgcagatgtggcttactat
gccatgctcaggaagagggtcaaccagtgcattgtcatctctggtgaaagtggctcgggt
aagacccagagtaccaacttcctgatccactgtctaactgcgctcagccagaagggttat
gccagcggagtggagaggaccatactgggagcaggaccagtcctggaggcctttgggaat
gccaagacagcccacaacaacaactctagtcgctttggtaaattcatccaggttaattac
ctggagagtggagtagtcagaggggctgtggtggagaagtatctcctggagaagtctcgt
ctggtgtccagagagaagaatgagaggaactaccacgtgttttactacctgttgttgggg
gcttcagaggaggagaggaaggagtttaagttgctgccgcctgaagaatacttctacctc
aagcagcaaaactttaagatagaagacgaggaagacctgcgtcatgacttcgaaaggctg
cagcaggcaatggagatggttggcttccttcccgccaccaagaaacagatcttctctgtc
ctctctgccatcttgtacctgggcaacgtgacctacaggaggaagtcaacgggccgagat
gagggcttggatgtgggaccgccggagatcctggctacactctctgacctgctaaaggtg
aaagaggagctgctggtcgaggcgctgacgaagaggaaaacggtgacagtcaatgacaag
ctgatcctcccttacagccagtctgaggccatcacagccagagactccatggccaaatct
ctgtacagcgccttgtttgactggattgtcctgcgcatcaatcatgcactgcttaacaag
aaagacatggaggaatctgtcccgtgcttgtccattggtgtcctggacatttttggcttt
gaggactttgagacaaacagctttgagcagttctgcatcaactatgcaaacgagcagctg
cagtattacttcaaccaccacatcttcaacctggaacaggaggagtaccaagcagaggga
atcacctggcacaacatcgactacacagacaatgtgggctgtatccatctcatcagcaag
aagcccactggcctgctctacctgctggatgaggagagcaactttccccatgccacagat
gaaacattattggccaaattcaagcagcagcaccaaggcaacaagtactttgtccccaca
ccggtcatggagcctgccttcgtcattcgccactttgctggaaaagtcaaatatcaaatc
aaggatttccgggagaagaacacagaccacatgcgccctgacattgtagcattgctgcgc
agcagtgaccgtgcatatgtgcggcagctcatcggcatggacccagtggccatgtttcgg
tggggcatcctgcgcgccaccatccgaggcatcgctgctttcaacgaggcgggccggtcc
tgggctgccaaaacttcaggtgttgtccgtccaatctccagaactcctttaggagagctt
caacggtccaatgccccaatagagagaatgtacaaacgagcttctatgctcgatttctac
tttgatcactcagaggagcgccctctagaggcctttgaagacatctttgctagctatgag
agtaagaaagacatgcatgcagagatcatcagctccattaagaacttgcagctggatggt
gaggaccctcgcaagctgctgcaatcctggggtcgcctccgcttcccacgacacgtcctc
cagaaaaacaagaccaccaaacagaagcaggtcatccccaagagtttgctggattctcgg
tctctgaagttcattgtgagcctgacgctgcatgatcgcactaccaagtccctgctgcac
ctgcacaagaagaagaagccccccagcatcagtgctcagttccagacctctctgaccaaa
ctcttggagactctgaacagagcagagcctttcttcattcgctgtatccgctccaacgct
gagaagaaggagatgtatctggatgaggccttggtggttcagcagctgcgatacacagga
atgctggaaactgttcgtattaggaggtcaggctacggagccaagtacacattccaggag
tttattgagcagttcagagttttgctgccaaagaccgccactgcctgtaaagaggacatc
tcagtgctccttgacaagaagatgggcctggaccccaccacatatcagataggcaaaact
aaggttttcttgaaggagctcgagcggcagcagctgcaggacacgctgcacaaggacgta
attcgtaaaatcatcttccttcagcgttggttcagagcttgtctacagaggaaagagttt
atggacatgagacaggcagccatcttgatccagcgttcatggcgtaggtactgcaaagag
gagcgaaggcagcatgcagctactttgattcaggctgtgtggagagggcacagacagaga
ttagagtaccaccgccaaagacagggcgctaccaaaatacaggccctggtcagaggccac
tcagcacgcaggaggtgtcaatccatgcgtgaggataaacggaggatggaggaagaggaa
aaagaagctcagaggagggcagaagaagaggaaagaaggaggagagaagaggaagaagag
gcgaggagaaaagctgaggaggaagaagaggcgaggaggaggatggaagaagaagcaagg
agaaaagaagaagaggaggaggaagcgaggaggagagcagaggaagaagaggcagctaga
gaagagcatgaagcaaagaaaaagagagaggaggaaagactggcaagagagcctcaaaca
agagaagatccagatatagagctggtcacagaggagatgctggatgacaacctccctgtc
caagagacagaggaggagagaggagaggaggacgaagaggttaaatcaagctcgcacaca
gaggaggaggagcaggagaaggacgaagagctggaggatgaggatgaggaattaaatttg
gagaccaacggtaccgcggctgaggctggaccccagccggatgagaaagaggaggaagag
gatttggacaccagaggtctgccctctgatggggtcacctccaacgcacttacacccaca
tctccaggcaaggcttcagataaacaggctcccagcactacctccacaccttccaaagct
gaacaaaacagagtacgacctccagctaaccggggccagtcatccaggagccaggagaag
agagagcagaggagacgaagagggctggaacacaaccagagagagactgatcgagccgct
tcctcctcttccttctcctcagccattggcaaggaccaaacgtccccgccgaagagcaaa
agccaggagtcccctaagctaaaagagcggtcagacagcaaggagctcgaccagtacacc
tttgtggcctggaagatgaaggaagacaagggagggaagaaggaggcaaaaacttctcct
cctcctcccgcctccggtcccgttcgaccgtccacgctgtccctgcagcccgccgatcct
gcacctgagagaaacggcctaggggagggtgggggagcggtaaacctgcaacgccgcccc
ggggcgatcaaggagaagccggagaagtggaggggcaggaggagtaacggagaatactct
gagagaaacagccctcctccacctcacaacagagaggaaaggaggaaaaaacaaccactg
agtgaaacagcctcatcatcaattgacagtttgtctccaggttcagaaggagctggtgct
gtgtcggccagagagttcatttctccctcagacagccatggtgatggctcaaaggggagc
tcctttagacggagacagcaagagggttctggtcacccagattcagcacactccatgcca
tccacacctgacaggcctggtgggttcttcagcaagattttgaaaaaacgaccccacaaa
gaggcccagactccagacaacggagagctgacactcgctcagattctcaatgagaggcca
acaggaggggaagccccaacctctggacatccatctcggcctctttcgcagcctcacagc
gaccgtaaaggtgtaggccgcaacccctccataaagatcagtcgtgccacgcgggtctcg
gagcagtggaacgcctcactggaccgggagattaccaatgccaatgagctgcggcacctc
gacgagttcctgggcaaccaggtcaatgacttccgctccagggggaagtcgctctcagct
acagaggccatctttgtaacagccactatgcagttcagagagaatataaaagccatgtat
tccctcacgaaacctaccattggctacaaagctctgatgacaagctaccagaacaaagtg
atccacctggcgagcgacaagcagaaaggagaagtccaacttgtggtgaacttgttccag
tcggtgctggacggcttcatcaggggggagatgaagaaggaggaagctgaacctgcaaag
cccgctaaagcccggaagaagaggaggaaaaaagacaaaagtatggagagcccgctggat
catgggttcgtcaactatcaggtcaacatcatgcagtcgtgtgaccagtgtagttcttac
atctggggcatggagaaggcctacatgtgcagctattgtaaaatggtgtgccataagaag
tgcatctgcaaaataaccgctgactgctccaccttctgtgccaaaaagagtgacgaagac
tccggtggtcagcatttcggggtgcgcgtgtgtcacctggtcagtgataagaacccagta
cccatggtgctggagatgatgctggagcacgtggagatgcatggcctctacacagagggc
atctaccgcaagtctggctctgccaacagaataaaagagctgcaccagcgactggagacc
gatccacaccaggtctgccttgaagactaccccatccacacagtgacgggcctggtcaaa
cagtggttgagggagctgccagacccactcatgaccttcacacattacaatgacttccta
catgcagttgaactaccagagaagcaggagcagcttcatgccatatacaaaacgctggag
gagcttcctacagcaaacttcaacactttggagagactcgtctttcaccttgtcagagtg
tgtaaggacgaggctcacaaccgcatgtctcctaactcattagccatagtttttgcccca
tgtatcctgcgctgtccagacagcgctgacccgctgctcagcatgaaggatgttgccaag
acgaccacgtgtttagagatgctcatcaacgagcagatcagacgctacaatgagaagatg
gaggagatcgagcagctggagtacgccgaggctctggctgttaaccagctcaaactcaag
agacaaaacacgcactactggcatttacctctcaggttctcagctccttacaaaggagtg
gtggtgcatgagaaggtcagctctgacctcagtgtggtccctgagaacgagcctctggac
tcggacacggaggctgagaaaaacctggtggagcgcatcaagtccatcaaacaggagaaa
gaggatctggcctgccggctgccggagatggagcagcccggctcggaccaggagaacttg
gactccgaagcctcgctgagctccgagagtcttttggacgagcagcagcgctcctctgct
catagctcagagccagaaggacgaggtggcttccagctgaaaaggttcaggccagtttgt
ccacccaaaccacccgacctggcccagcgacctaaaatcctcattggacgcgtctctctg
tcaaacctcacccccgccagctccacctcctccgtgtccagctgcgcttcttcaacctct
gaatcctccagcgcctctttacggcatctgctgcaacgccgcaaccctgtcatcccggac
acggttaaactccccccgggcgtgctttcccagtccgcggcctccagtctggctcagact
tacacccctcccatgaatcgagctttcaaaaacgtggtcaggagaagagagcagccgggc
cgccgcaaagacagcacccagtccctgtacatcgacagccccgagtgcgacctgttgttg
catttctcctcctgccctccctccgcctcctcctcctcctcctccatctccttggtgact
cgctcccctcaggaacagcaccacgacgcacgagctccgaagggccagagacgtttttct
gaccctgacataccttatgcggaagaagacgtctga
DBGET
integrated database retrieval system
