Lates calcarifer (barramundi perch): 108881352
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Entry
108881352 CDS
T04895
Name
(RefSeq) retinal homeobox protein Rx1
KO
K09332
retina and anterior neural fold homeobox protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881352
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108881352
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108881352
NCBI-ProteinID:
XP_018528821
UniProt:
A0AAJ7LPF2
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Position
LG17:complement(13125076..13144316)
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AA seq
359 aa
AA seq
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MHLSLDTMSMVDDSCLSPSNFHEMGKGGGFASGGRVHSIDVILGFSKDQDPLLSPAGASG
PQKVDIDGLAEPGKQQEPSLHPSYSGHLSSLRNGSTEQQQQQQQQQQQQYHDTGLFTNKC
EEDLSELRKSTDSDEGKSPEPCKDDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS
REELAMKVNLPEVRVQVWFQNRRAKWRRQEKMDASTMKLHDSPMLSFNRPAPVHTSMGPM
SNSLPLDPWLTSPLSSATPVHSIPGFMGPPQGLQPSYPNHSFLNSTPHPPHPHPHPHSHP
HPSMGQGMQSMAPPPYQCPAVYPDKYPLEDVDQRSSSIAALRMKAKEHIQSMDKTWQPM
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtcactggataccatgagcatggtggacgacagctgcctctcacccagcaac
ttccacgaaatgggcaaaggtgggggcttcgcttcagggggccgcgtccacagcattgat
gtcattctcggtttcagtaaagaccaggaccccctgctcagtccggctggggcctctgga
cctcagaaagtggacatagacggcctggcagagcctgggaagcagcaggagccctcgttg
cacccttcctacagcgggcacctttcctctctgagaaatggcagcacagagcagcagcag
cagcagcagcagcagcagcagcagcagtaccatgatactggcttattcacaaataagtgt
gaggaggacctgagcgagctgaggaagagcacagacagtgatgagggcaagtctccggag
ccttgcaaggacgatcaacccaagaagaagcacaggcgcaaccgcaccaccttcaccacc
taccagctgcatgagctggagcgtgcctttgagaagtcccactacccagacgtgtacagc
cgagaggagctggccatgaaggtgaacctgcccgaagtccgagttcaggtctggttccag
aaccgcagagcaaagtggcgtcggcaggagaaaatggatgccagcaccatgaagctccac
gactcacccatgctgtccttcaaccgcccggcaccagttcacaccagcatgggtccgatg
tccaactccctccccttggacccctggctgacctctcccctgtccagcgccacaccggtt
cacagcatcccaggcttcatgggaccacctcagggcctccagccaagctaccccaaccac
agcttcctcaactccactcctcatcctccccacccacatcctcacccacactctcatcct
catccgtccatgggtcaggggatgcagagcatggcccctcctccttaccagtgtccagca
gtgtaccctgataaataccctctggaggacgtggaccagcgcagctcgagtatcgctgcg
ctgagaatgaaagcaaaggaacacatccagtctatggacaagacctggcaacccatgtga
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